Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g0176 ATGCCACGTGTGGACATGCGATTGGCCCGAAGGCCCTTGAAAAAGCTACCTTATCCATGGAAGACACGATTCGTTTTGTTGAGTCGAGGCGGGCAGCCGGGCAGGGCACTTTCGACTGGCGGGAAGGCAATGACATCCGTGGCGGTTGCCGTTAACGGCGTCCGCGGCGGCAAAGGCGGCGGAGCAAGCCGCCGCGCTGTCAGATGGGCCGTTGAGAATCTCTTGCCGACCGCCGATCGCTTCATTTTGGTTCACGTTATGCCCAAAATCACCTCCATCCCCACCCCAATGGGGGATCTTGTTGCTGTCTCTGAACTTGATGCAGATGTGGTAGCTCTTTATGTTCATGATATGAAAAAGAAATATGAACAAGTTTTTGTACCTTTTAAGAAGTTATGTAGAAGAGAAAAGTTTCTTCTTCTGGTAGAAACTTTGATTTTGGAGGATGACAATCCTGCCACTGCACTTTTGAGATATGCATCTCAATCTGGGATTAAATGCTTGGTTTTGGGTTCTTGTTTTAGAACTTGCATAGCAAGGAAGATAAAAGGGGATTCAGTACCCTCTGCTATTATGAGAACTGCTCCTAGTTCTTTTGATATTTATGTTATATATAAGAGAAGAGTTATCACACGAACCGCTAGTACTGCTCCATCTAGTGAAACTGACTCAAGGCAGTGGATGCTTGGTGACACTGATTATTACAGGCGTTTCAGTGCTGTTAGTGAAAAATTATCAGGATCTTCCTCTCCTTCTTCCTTGTCGATTGGACATCGAAGGGGTGATAGCCTCGAAGTTAACTCTACTGAGCAACTGAACTCTTTGAGCACTCTGACTGAGGAGGAAGATATGCGGGCTGAAGTTGAATCTCTGCAGCTAGAACTAGAGACCACTGTTTCCTTGTACAATCAAGCTTGTGAAGAACTAGTATATGCTCAGAAGAAGGTTCAATCACTTACATCAGAATGCCTTGAAGAATCAAGAAAAGTGAATGCTGCTTTGGAAAGGGAACAATCTTTGAGGAAAGTTGCTGCTAAAGAGAAAGCAAAGCATTTGGAAGCCATTAAAGAGCTTGAGGAGGCTAAAGACTTGCTGGCTAAAGAAGCTTATGAGAGGCAGCTGGCTGAGCTTAATGCCATAAAGGAGTCCGTGGAGAAGCAGAAAATTCTTGATACTCTTCTGACTAATGATAGGAGGTACAGAAGATATACCACTGCCGAAATAGAAGCTGCAACAAATTTCTTCGACGAAGTTAATGTGATTGGCATGGGAGGATATGGGAAAGTCTACAAATGCAGTCTCGATCATACACCTGTAGCCATTAAGGTTTTTCAACACGACATATTCGAGAAAAAAGATGAGTTTCTGAAAGAGGTTGAAATTCTAAGTCAGATACGACATCCTCACGTGGTTTTACTGCTTGGAGCTTGTCCCGAGCGAGGTTGTTTGATCTATGAATACATGGAAAATGGAAGCTTAGATGACCATATCTTGCTCCGGAAAGGAAAAGCTCCCCTCCCTTGGTCTATTAGATTTAGAATAGTTTTTCAAGTAGCTTCTGGCCTTGCATTTTTACACAATTCAAAGCCAGAGCCTATCATTCATAGAGATCTCAAACCGGGTAATATCTTACTGGACAGAAACTTTGTAAGTAAAATCTCAGATGTTGGAATGGCTAAGATCATCGGCGATATTGTGCCGGACAATGTCACAGAGTACCGAAACACCATTCTTGCCGGTACTCTACATTACATGGATCCTGAATATCAGAGAACTGGCACACTCCGGCCAAAGTCAGATACGTACGCACTTGGGGTAACAATTCTGCAGTTGTTGACCGGGCGAGAACCACACGGTCTTCTTCTGGCTATTGAAAACACCATCGCAAGCGCGTCCGTTGCAGATATTCTAGACAAGTCAATAACTGACTGGCCTCTGGCTGAAGCTGAAGAGTTAGCTCAACTCGCACTCAAGTGCTTGAAACTTAGATGCAGGGATAGGCCAGATCTTGAATCTGAAGTTCTTCCAGTCCTCAAAAGGCTTGTTGATTTTGCAGATTCTTGTCAAAATGAAGGCAAAAATCCTGCTAATCCCCCAAGCCACTACTTCTGCCCAATCCTACAGGAAATCATGGAGGACCCTTATATAGCAGCCGATGGCTTTACTTATGAGTATGTAGCCATTAAAGCATGGCTCGAGAAATACGACATATCGCCCGTGACAAAGCTTAAGCTTCAGCATTCTATTTTTATTCCAAACCACACTCTGCTCTCTGCCATACTAGAGTGGAAGTCAAGAGTGACATTTCCATCTTCCTAA 2319 44.07 MPRVDMRLARRPLKKLPYPWKTRFVLLSRGGQPGRALSTGGKAMTSVAVAVNGVRGGKGGGASRRAVRWAVENLLPTADRFILVHVMPKITSIPTPMGDLVAVSELDADVVALYVHDMKKKYEQVFVPFKKLCRREKFLLLVETLILEDDNPATALLRYASQSGIKCLVLGSCFRTCIARKIKGDSVPSAIMRTAPSSFDIYVIYKRRVITRTASTAPSSETDSRQWMLGDTDYYRRFSAVSEKLSGSSSPSSLSIGHRRGDSLEVNSTEQLNSLSTLTEEEDMRAEVESLQLELETTVSLYNQACEELVYAQKKVQSLTSECLEESRKVNAALEREQSLRKVAAKEKAKHLEAIKELEEAKDLLAKEAYERQLAELNAIKESVEKQKILDTLLTNDRRYRRYTTAEIEAATNFFDEVNVIGMGGYGKVYKCSLDHTPVAIKVFQHDIFEKKDEFLKEVEILSQIRHPHVVLLLGACPERGCLIYEYMENGSLDDHILLRKGKAPLPWSIRFRIVFQVASGLAFLHNSKPEPIIHRDLKPGNILLDRNFVSKISDVGMAKIIGDIVPDNVTEYRNTILAGTLHYMDPEYQRTGTLRPKSDTYALGVTILQLLTGREPHGLLLAIENTIASASVADILDKSITDWPLAEAEELAQLALKCLKLRCRDRPDLESEVLPVLKRLVDFADSCQNEGKNPANPPSHYFCPILQEIMEDPYIAADGFTYEYVAIKAWLEKYDISPVTKLKLQHSIFIPNHTLLSAILEWKSRVTFPSS 772
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1932542 1938633 - CePI673135_11g001760.1 Cec11g0176 215388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g0176 772 PANTHER OS02G0152300 PROTEIN 47 760 IPR051348 -
Cec11g0176 772 Pfam Universal stress protein family 61 196 IPR006016 -
Cec11g0176 772 Gene3D Phosphorylase Kinase; domain 1 394 487 - -
Cec11g0176 772 CDD RING-Ubox_WDSUB1-like 699 753 - -
Cec11g0176 772 Gene3D Transferase(Phosphotransferase) domain 1 488 695 - -
Cec11g0176 772 Gene3D HUPs 44 199 IPR014729 -
Cec11g0176 772 CDD STK_N 46 206 - -
Cec11g0176 772 ProSitePatterns Protein kinases ATP-binding region signature. 421 442 IPR017441 GO:0005524(InterPro)
Cec11g0176 772 ProSitePatterns Serine/Threonine protein kinases active-site signature. 533 545 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec11g0176 772 FunFam Os07g0541700 protein 488 578 - -
Cec11g0176 772 SUPERFAMILY Protein kinase-like (PK-like) 398 671 IPR011009 -
Cec11g0176 772 Coils Coil 341 387 - -
Cec11g0176 772 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 59 196 - -
Cec11g0176 772 ProSiteProfiles U-box domain profile. 697 770 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
Cec11g0176 772 MobiDBLite consensus disorder prediction 244 269 - -
Cec11g0176 772 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 697 768 IPR013083 -
Cec11g0176 772 SUPERFAMILY RING/U-box 689 766 - -
Cec11g0176 772 SMART serkin_6 415 678 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g0176 772 SMART Ubox_2 701 763 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
Cec11g0176 772 Pfam Protein kinase domain 417 671 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g0176 772 Pfam U-box domain 699 764 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
Cec11g0176 772 ProSiteProfiles Protein kinase domain profile. 415 678 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0462 Cec-Chr1:4770647 Cec11g0176 Cec-Chr11:1932542 1.90E-107 dispersed
Cec05g0177 Cec-Chr5:1493718 Cec11g0176 Cec-Chr11:1932542 9.30E-91 dispersed
Cec06g0380 Cec-Chr6:4317072 Cec11g0176 Cec-Chr11:1932542 2.70E-68 dispersed
Cec11g0176 Cec-Chr11:1932542 Cec11g1173 Cec-Chr11:24038135 6.50E-104 dispersed
Cec06g1929 Cec-Chr6:32682745 Cec11g0176 Cec-Chr11:1932542 1.30E-07 transposed
Cec11g0176 Cec-Chr11:1932542 Cec09g0078 Cec-Chr9:638457 1.40E-114 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72376 PF00069 Pkinase 1.40E-41 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g0176 - - - 0.0