Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec11g0176 | ATGCCACGTGTGGACATGCGATTGGCCCGAAGGCCCTTGAAAAAGCTACCTTATCCATGGAAGACACGATTCGTTTTGTTGAGTCGAGGCGGGCAGCCGGGCAGGGCACTTTCGACTGGCGGGAAGGCAATGACATCCGTGGCGGTTGCCGTTAACGGCGTCCGCGGCGGCAAAGGCGGCGGAGCAAGCCGCCGCGCTGTCAGATGGGCCGTTGAGAATCTCTTGCCGACCGCCGATCGCTTCATTTTGGTTCACGTTATGCCCAAAATCACCTCCATCCCCACCCCAATGGGGGATCTTGTTGCTGTCTCTGAACTTGATGCAGATGTGGTAGCTCTTTATGTTCATGATATGAAAAAGAAATATGAACAAGTTTTTGTACCTTTTAAGAAGTTATGTAGAAGAGAAAAGTTTCTTCTTCTGGTAGAAACTTTGATTTTGGAGGATGACAATCCTGCCACTGCACTTTTGAGATATGCATCTCAATCTGGGATTAAATGCTTGGTTTTGGGTTCTTGTTTTAGAACTTGCATAGCAAGGAAGATAAAAGGGGATTCAGTACCCTCTGCTATTATGAGAACTGCTCCTAGTTCTTTTGATATTTATGTTATATATAAGAGAAGAGTTATCACACGAACCGCTAGTACTGCTCCATCTAGTGAAACTGACTCAAGGCAGTGGATGCTTGGTGACACTGATTATTACAGGCGTTTCAGTGCTGTTAGTGAAAAATTATCAGGATCTTCCTCTCCTTCTTCCTTGTCGATTGGACATCGAAGGGGTGATAGCCTCGAAGTTAACTCTACTGAGCAACTGAACTCTTTGAGCACTCTGACTGAGGAGGAAGATATGCGGGCTGAAGTTGAATCTCTGCAGCTAGAACTAGAGACCACTGTTTCCTTGTACAATCAAGCTTGTGAAGAACTAGTATATGCTCAGAAGAAGGTTCAATCACTTACATCAGAATGCCTTGAAGAATCAAGAAAAGTGAATGCTGCTTTGGAAAGGGAACAATCTTTGAGGAAAGTTGCTGCTAAAGAGAAAGCAAAGCATTTGGAAGCCATTAAAGAGCTTGAGGAGGCTAAAGACTTGCTGGCTAAAGAAGCTTATGAGAGGCAGCTGGCTGAGCTTAATGCCATAAAGGAGTCCGTGGAGAAGCAGAAAATTCTTGATACTCTTCTGACTAATGATAGGAGGTACAGAAGATATACCACTGCCGAAATAGAAGCTGCAACAAATTTCTTCGACGAAGTTAATGTGATTGGCATGGGAGGATATGGGAAAGTCTACAAATGCAGTCTCGATCATACACCTGTAGCCATTAAGGTTTTTCAACACGACATATTCGAGAAAAAAGATGAGTTTCTGAAAGAGGTTGAAATTCTAAGTCAGATACGACATCCTCACGTGGTTTTACTGCTTGGAGCTTGTCCCGAGCGAGGTTGTTTGATCTATGAATACATGGAAAATGGAAGCTTAGATGACCATATCTTGCTCCGGAAAGGAAAAGCTCCCCTCCCTTGGTCTATTAGATTTAGAATAGTTTTTCAAGTAGCTTCTGGCCTTGCATTTTTACACAATTCAAAGCCAGAGCCTATCATTCATAGAGATCTCAAACCGGGTAATATCTTACTGGACAGAAACTTTGTAAGTAAAATCTCAGATGTTGGAATGGCTAAGATCATCGGCGATATTGTGCCGGACAATGTCACAGAGTACCGAAACACCATTCTTGCCGGTACTCTACATTACATGGATCCTGAATATCAGAGAACTGGCACACTCCGGCCAAAGTCAGATACGTACGCACTTGGGGTAACAATTCTGCAGTTGTTGACCGGGCGAGAACCACACGGTCTTCTTCTGGCTATTGAAAACACCATCGCAAGCGCGTCCGTTGCAGATATTCTAGACAAGTCAATAACTGACTGGCCTCTGGCTGAAGCTGAAGAGTTAGCTCAACTCGCACTCAAGTGCTTGAAACTTAGATGCAGGGATAGGCCAGATCTTGAATCTGAAGTTCTTCCAGTCCTCAAAAGGCTTGTTGATTTTGCAGATTCTTGTCAAAATGAAGGCAAAAATCCTGCTAATCCCCCAAGCCACTACTTCTGCCCAATCCTACAGGAAATCATGGAGGACCCTTATATAGCAGCCGATGGCTTTACTTATGAGTATGTAGCCATTAAAGCATGGCTCGAGAAATACGACATATCGCCCGTGACAAAGCTTAAGCTTCAGCATTCTATTTTTATTCCAAACCACACTCTGCTCTCTGCCATACTAGAGTGGAAGTCAAGAGTGACATTTCCATCTTCCTAA | 2319 | 44.07 | MPRVDMRLARRPLKKLPYPWKTRFVLLSRGGQPGRALSTGGKAMTSVAVAVNGVRGGKGGGASRRAVRWAVENLLPTADRFILVHVMPKITSIPTPMGDLVAVSELDADVVALYVHDMKKKYEQVFVPFKKLCRREKFLLLVETLILEDDNPATALLRYASQSGIKCLVLGSCFRTCIARKIKGDSVPSAIMRTAPSSFDIYVIYKRRVITRTASTAPSSETDSRQWMLGDTDYYRRFSAVSEKLSGSSSPSSLSIGHRRGDSLEVNSTEQLNSLSTLTEEEDMRAEVESLQLELETTVSLYNQACEELVYAQKKVQSLTSECLEESRKVNAALEREQSLRKVAAKEKAKHLEAIKELEEAKDLLAKEAYERQLAELNAIKESVEKQKILDTLLTNDRRYRRYTTAEIEAATNFFDEVNVIGMGGYGKVYKCSLDHTPVAIKVFQHDIFEKKDEFLKEVEILSQIRHPHVVLLLGACPERGCLIYEYMENGSLDDHILLRKGKAPLPWSIRFRIVFQVASGLAFLHNSKPEPIIHRDLKPGNILLDRNFVSKISDVGMAKIIGDIVPDNVTEYRNTILAGTLHYMDPEYQRTGTLRPKSDTYALGVTILQLLTGREPHGLLLAIENTIASASVADILDKSITDWPLAEAEELAQLALKCLKLRCRDRPDLESEVLPVLKRLVDFADSCQNEGKNPANPPSHYFCPILQEIMEDPYIAADGFTYEYVAIKAWLEKYDISPVTKLKLQHSIFIPNHTLLSAILEWKSRVTFPSS | 772 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 1932542 | 1938633 | - | CePI673135_11g001760.1 | Cec11g0176 | 215388 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec11g0176 | 772 | PANTHER | OS02G0152300 PROTEIN | 47 | 760 | IPR051348 | - | |
Cec11g0176 | 772 | Pfam | Universal stress protein family | 61 | 196 | IPR006016 | - | |
Cec11g0176 | 772 | Gene3D | Phosphorylase Kinase; domain 1 | 394 | 487 | - | - | |
Cec11g0176 | 772 | CDD | RING-Ubox_WDSUB1-like | 699 | 753 | - | - | |
Cec11g0176 | 772 | Gene3D | Transferase(Phosphotransferase) domain 1 | 488 | 695 | - | - | |
Cec11g0176 | 772 | Gene3D | HUPs | 44 | 199 | IPR014729 | - | |
Cec11g0176 | 772 | CDD | STK_N | 46 | 206 | - | - | |
Cec11g0176 | 772 | ProSitePatterns | Protein kinases ATP-binding region signature. | 421 | 442 | IPR017441 | GO:0005524(InterPro) | |
Cec11g0176 | 772 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 533 | 545 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec11g0176 | 772 | FunFam | Os07g0541700 protein | 488 | 578 | - | - | |
Cec11g0176 | 772 | SUPERFAMILY | Protein kinase-like (PK-like) | 398 | 671 | IPR011009 | - | |
Cec11g0176 | 772 | Coils | Coil | 341 | 387 | - | - | |
Cec11g0176 | 772 | SUPERFAMILY | Adenine nucleotide alpha hydrolases-like | 59 | 196 | - | - | |
Cec11g0176 | 772 | ProSiteProfiles | U-box domain profile. | 697 | 770 | IPR003613 | GO:0004842(InterPro)|GO:0016567(InterPro) | |
Cec11g0176 | 772 | MobiDBLite | consensus disorder prediction | 244 | 269 | - | - | |
Cec11g0176 | 772 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 697 | 768 | IPR013083 | - | |
Cec11g0176 | 772 | SUPERFAMILY | RING/U-box | 689 | 766 | - | - | |
Cec11g0176 | 772 | SMART | serkin_6 | 415 | 678 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec11g0176 | 772 | SMART | Ubox_2 | 701 | 763 | IPR003613 | GO:0004842(InterPro)|GO:0016567(InterPro) | |
Cec11g0176 | 772 | Pfam | Protein kinase domain | 417 | 671 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec11g0176 | 772 | Pfam | U-box domain | 699 | 764 | IPR003613 | GO:0004842(InterPro)|GO:0016567(InterPro) | |
Cec11g0176 | 772 | ProSiteProfiles | Protein kinase domain profile. | 415 | 678 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec01g0462 | Cec-Chr1:4770647 | Cec11g0176 | Cec-Chr11:1932542 | 1.90E-107 | dispersed | |
Cec05g0177 | Cec-Chr5:1493718 | Cec11g0176 | Cec-Chr11:1932542 | 9.30E-91 | dispersed | |
Cec06g0380 | Cec-Chr6:4317072 | Cec11g0176 | Cec-Chr11:1932542 | 2.70E-68 | dispersed | |
Cec11g0176 | Cec-Chr11:1932542 | Cec11g1173 | Cec-Chr11:24038135 | 6.50E-104 | dispersed | |
Cec06g1929 | Cec-Chr6:32682745 | Cec11g0176 | Cec-Chr11:1932542 | 1.30E-07 | transposed | |
Cec11g0176 | Cec-Chr11:1932542 | Cec09g0078 | Cec-Chr9:638457 | 1.40E-114 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72376 | PF00069 | Pkinase | 1.40E-41 | CL0016 | Cec | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec11g0176 | - | - | - | 0.0 |