Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec11g0201 | ATGATCGTCGGCGAGCAGCCCAAACGCCCCAATCCGACGGTTCAGGTTCCACCGTGGACGTTTATGGAGAATTCGGTGATGGATGTGTACAGTCATTCGCCAGGGAGCGGTGGCAGCAGTGGTTCCGTTAAGTGTGACGGATGTTCCAGCGGAGGCGGATACTCTCCTTATTATCTGCAGGAAGCGTTGGCGATGCTGAAGCGGTATCTTCCGTCTAATGAGGCGGAGATGGACTCGGATTTTGATGTTTCAGGTCGGGAGTTGGATTCTCCGGTGGATGCGTACTCTTCCGATCAGTTTCGAATGTATGAGTTCAAGATTAAGAAGTGTACGAGAGGACGATCGCACGACTGGACTGAGTGTCCGTTTGCTCATCCCGGCGAGAAGGCTCGCCGGAGAGATCCGAGGAGGTATTACTATTCAGGTACGGCATGTGCGGATTTTCGGAAAGGGAGCTGTATGAAAGGAGATGCGTGTGAGTTTGCTCATGGAGTTTTCGAGTGCTGGCTTCATCCGGCTCGCTATCGGACTCAGCCATGCAAGGATGGGACGAGTTGTCGGAGAAGAGTTTGTTTCTTCGCTCATACGCCGGAGCAACTTAGGGTTTTGCCTCAACAAAGCCCTCGGAGTACGAGTTCCATCCCTTCGTACGATGGATCGCCTCTCCGGCAAGCAATCGAGGCCTGTGCAAAGCAAATGCCCTATTTATCTTCTCCAGGAACATCGCCCCCAGTATCTCCTCGAATCGAGTCTCCACCTCAATCGCCGATGATTAAGTCACTAAATCGACCTCACGCAACAAGTTCGATCAACGAAATGGTTGCATCACTGCGAAGTTTACAGCTCAATAAGGAACTCTGTAAGGTACAATCTCCTCCTTCCTCGTGGAATGTTCAAGTTGGATCTCCTGTATTCGGATCTCCAAAGGAATCCACCGCTAGATCCGGTTTATGTAGCCTTCCAGAAACTCCGACTCGTCCAGTTACCCGTTATCTCGATTTCTGGGACCTAGGCTGCGGAGAGGAACCGGCGATGGAGCGAGTGGAGTCCGGAAGAGATCTTCGTGCAAAAATGTTTGAAAAATTGAGGAAGGAGAACTCCGTCGGGTGCGGCGATCAAGACAAATGCAGCGGCGGCGGAGGTCTGGATGTCGGTTGGATCTCGGAGCTCCTCAAGTAA | 1179 | 51.99 | MIVGEQPKRPNPTVQVPPWTFMENSVMDVYSHSPGSGGSSGSVKCDGCSSGGGYSPYYLQEALAMLKRYLPSNEAEMDSDFDVSGRELDSPVDAYSSDQFRMYEFKIKKCTRGRSHDWTECPFAHPGEKARRRDPRRYYYSGTACADFRKGSCMKGDACEFAHGVFECWLHPARYRTQPCKDGTSCRRRVCFFAHTPEQLRVLPQQSPRSTSSIPSYDGSPLRQAIEACAKQMPYLSSPGTSPPVSPRIESPPQSPMIKSLNRPHATSSINEMVASLRSLQLNKELCKVQSPPSSWNVQVGSPVFGSPKESTARSGLCSLPETPTRPVTRYLDFWDLGCGEEPAMERVESGRDLRAKMFEKLRKENSVGCGDQDKCSGGGGLDVGWISELLK | 392 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 2165280 | 2166458 | - | CePI673135_11g002010.1 | Cec11g0201 | 215413 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec11g0201 | 392 | Gene3D | - | 103 | 165 | - | - | |
Cec11g0201 | 392 | SUPERFAMILY | CCCH zinc finger | 138 | 168 | IPR036855 | GO:0046872(InterPro) | |
Cec11g0201 | 392 | PANTHER | UNKEMPT FAMILY MEMBER | 55 | 392 | IPR045234 | - | |
Cec11g0201 | 392 | ProSiteProfiles | Zinc finger C3H1-type profile. | 139 | 166 | IPR000571 | GO:0046872(InterPro) | |
Cec11g0201 | 392 | FunFam | Zinc finger CCCH domain-containing protein 66 | 97 | 165 | - | - | |
Cec11g0201 | 392 | SMART | c3hfinal6 | 139 | 165 | IPR000571 | GO:0046872(InterPro) | |
Cec11g0201 | 392 | SMART | c3hfinal6 | 174 | 197 | IPR000571 | GO:0046872(InterPro) | |
Cec11g0201 | 392 | MobiDBLite | consensus disorder prediction | 237 | 256 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec05g1948 | Cec-Chr5:31562905 | Cec11g0201 | Cec-Chr11:2165280 | 7.20E-87 | dispersed | |
Cec07g0293 | Cec-Chr7:2865718 | Cec11g0201 | Cec-Chr11:2165280 | 3.80E-57 | dispersed | |
Cec07g1815 | Cec-Chr7:33863386 | Cec11g0201 | Cec-Chr11:2165280 | 5.00E-46 | dispersed | |
Cec08g1743 | Cec-Chr8:28576288 | Cec11g0201 | Cec-Chr11:2165280 | 2.90E-63 | dispersed | |
Cec10g1729 | Cec-Chr10:31956179 | Cec11g0201 | Cec-Chr11:2165280 | 1.40E-50 | dispersed | |
Cec11g0201 | Cec-Chr11:2165280 | Cec03g1649 | Cec-Chr3:34662962 | 1.70E-129 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
30488 | None | None | None | None | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec11g0201 | - | - | - | 0.0 |