Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec11g0214 | ATGAAGACCAAGGCGCCATTGAAGCAGCTTAAGCTCTCTGTTCCTGTTCAAGAAACTTCCATCCGTTCTTTTCTGACTGCGAGTGGAACATTTCACGACGGCAATCTACTACTGAACCAGAAAGGATTACGGCTTGTATCTGAAGAGAAAGAAGCGCAGACTTCAGATTGTAAGGAGCTTGATGTTGATTTCTCATTGGAAGATCTTGAGACTGTTAAAGTTATTGGAAAAGGAAGTGGAGGTGTAGTACAACTTGTTCGACACAAGTGGGTTGGAAAACTTTTTGCCTTAAAGGTAATCCAGATGAACATACAAGAGGATATCCGTAAACAGATAGTACAGGAACTGAAAATAAATCAAGCAGCACAATGTCCACATATTGTGGTCTGCTATCATTCTTTCTACCACAATGGTGCCATTTCTCTTGTGCTAGAATACATGGATCGCGGTTCTCTAGCCGATGTAGTCAGACAAATCAAAACAATTCTTGAACCATATCTTGCAGTTGTTTGTAAACAGGTTTTACAAGGTCTTGTTTACTTGCATCATGAGAGGCATGTTATACACAGAGACATCAAGCCATCCAATCTACTTGTGAACCATAAAGGTGAGGTCAAAATCACTGATTTTGGAGTAAGTGCGATGCTAGCAAGTTCTATGGGTCAAAGAGATACATTTGTAGGGACTTACAATTACATGTCGCCTGAACGAATTAGTGGGGGAACATATGACTACAGCAGTGATATATGGAGTTTGGGCTTGGTAGTACTTGAATGTGCCATCGGAAGGTTTCCTTATTTGCAGTCTGAAGAGCAGCAAAGCTGGCCAAGCTTTTATGAACTCCTAGAGGCAATTGTAGCAAAGCCACCGCCTTCTGCCCCACCGGATCAATTTTCCCCCGAGTTCTGTTCCTTCGTTTCTGCTTGCATTAAGAAGGACCCTAAAGAAAGATCGTCATCATTAGATCTTCTGAATCATCCTTTCATCAAGAAATTCGAAGATAAAGACATTGATGTCGGGATTCTCGTAGGCAGCTTGGATCCTCCGGTTGTCAAATCAATGATTTCGTAA | 1071 | 41.64 | MKTKAPLKQLKLSVPVQETSIRSFLTASGTFHDGNLLLNQKGLRLVSEEKEAQTSDCKELDVDFSLEDLETVKVIGKGSGGVVQLVRHKWVGKLFALKVIQMNIQEDIRKQIVQELKINQAAQCPHIVVCYHSFYHNGAISLVLEYMDRGSLADVVRQIKTILEPYLAVVCKQVLQGLVYLHHERHVIHRDIKPSNLLVNHKGEVKITDFGVSAMLASSMGQRDTFVGTYNYMSPERISGGTYDYSSDIWSLGLVVLECAIGRFPYLQSEEQQSWPSFYELLEAIVAKPPPSAPPDQFSPEFCSFVSACIKKDPKERSSSLDLLNHPFIKKFEDKDIDVGILVGSLDPPVVKSMIS | 356 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 2311386 | 2314819 | + | CePI673135_11g002140.1 | Cec11g0214 | 215426 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec11g0214 | 356 | ProSitePatterns | Protein kinases ATP-binding region signature. | 75 | 98 | IPR017441 | GO:0005524(InterPro) | |
Cec11g0214 | 356 | ProSiteProfiles | Protein kinase domain profile. | 69 | 329 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec11g0214 | 356 | Gene3D | Phosphorylase Kinase; domain 1 | 38 | 148 | - | - | |
Cec11g0214 | 356 | SMART | serkin_6 | 69 | 329 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec11g0214 | 356 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 187 | 199 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec11g0214 | 356 | PANTHER | DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED | 45 | 342 | - | GO:0000165(PANTHER)|GO:0004708(PANTHER) | |
Cec11g0214 | 356 | FunFam | Mitogen-activated protein kinase kinase 6 | 150 | 348 | - | - | |
Cec11g0214 | 356 | FunFam | Mitogen-activated protein kinase kinase 6 | 39 | 148 | - | - | |
Cec11g0214 | 356 | Gene3D | Transferase(Phosphotransferase) domain 1 | 150 | 343 | - | - | |
Cec11g0214 | 356 | CDD | PKc_MAPKK_plant_like | 67 | 333 | - | - | |
Cec11g0214 | 356 | SUPERFAMILY | Protein kinase-like (PK-like) | 67 | 337 | IPR011009 | - | |
Cec11g0214 | 356 | Pfam | Protein kinase domain | 70 | 329 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec07g1538 | Cec-Chr7:30964063 | Cec11g0214 | Cec-Chr11:2311386 | 2.90E-54 | dispersed | |
Cec10g1402 | Cec-Chr10:28358272 | Cec11g0214 | Cec-Chr11:2311386 | 8.50E-66 | dispersed | |
Cec11g0175 | Cec-Chr11:1928528 | Cec11g0214 | Cec-Chr11:2311386 | 2.60E-113 | dispersed | |
Cec11g0214 | Cec-Chr11:2311386 | Cec06g0235 | Cec-Chr6:2506987 | 1.50E-26 | dispersed | |
Cec11g0214 | Cec-Chr11:2311386 | Cec03g1594 | Cec-Chr3:34045737 | 3.30E-127 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72378 | PF00069 | Pkinase | 1.50E-66 | CL0016 | Cec | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec11g0214 | K04368 | - | csv:101218848 | 674.47 |