Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g0214 ATGAAGACCAAGGCGCCATTGAAGCAGCTTAAGCTCTCTGTTCCTGTTCAAGAAACTTCCATCCGTTCTTTTCTGACTGCGAGTGGAACATTTCACGACGGCAATCTACTACTGAACCAGAAAGGATTACGGCTTGTATCTGAAGAGAAAGAAGCGCAGACTTCAGATTGTAAGGAGCTTGATGTTGATTTCTCATTGGAAGATCTTGAGACTGTTAAAGTTATTGGAAAAGGAAGTGGAGGTGTAGTACAACTTGTTCGACACAAGTGGGTTGGAAAACTTTTTGCCTTAAAGGTAATCCAGATGAACATACAAGAGGATATCCGTAAACAGATAGTACAGGAACTGAAAATAAATCAAGCAGCACAATGTCCACATATTGTGGTCTGCTATCATTCTTTCTACCACAATGGTGCCATTTCTCTTGTGCTAGAATACATGGATCGCGGTTCTCTAGCCGATGTAGTCAGACAAATCAAAACAATTCTTGAACCATATCTTGCAGTTGTTTGTAAACAGGTTTTACAAGGTCTTGTTTACTTGCATCATGAGAGGCATGTTATACACAGAGACATCAAGCCATCCAATCTACTTGTGAACCATAAAGGTGAGGTCAAAATCACTGATTTTGGAGTAAGTGCGATGCTAGCAAGTTCTATGGGTCAAAGAGATACATTTGTAGGGACTTACAATTACATGTCGCCTGAACGAATTAGTGGGGGAACATATGACTACAGCAGTGATATATGGAGTTTGGGCTTGGTAGTACTTGAATGTGCCATCGGAAGGTTTCCTTATTTGCAGTCTGAAGAGCAGCAAAGCTGGCCAAGCTTTTATGAACTCCTAGAGGCAATTGTAGCAAAGCCACCGCCTTCTGCCCCACCGGATCAATTTTCCCCCGAGTTCTGTTCCTTCGTTTCTGCTTGCATTAAGAAGGACCCTAAAGAAAGATCGTCATCATTAGATCTTCTGAATCATCCTTTCATCAAGAAATTCGAAGATAAAGACATTGATGTCGGGATTCTCGTAGGCAGCTTGGATCCTCCGGTTGTCAAATCAATGATTTCGTAA 1071 41.64 MKTKAPLKQLKLSVPVQETSIRSFLTASGTFHDGNLLLNQKGLRLVSEEKEAQTSDCKELDVDFSLEDLETVKVIGKGSGGVVQLVRHKWVGKLFALKVIQMNIQEDIRKQIVQELKINQAAQCPHIVVCYHSFYHNGAISLVLEYMDRGSLADVVRQIKTILEPYLAVVCKQVLQGLVYLHHERHVIHRDIKPSNLLVNHKGEVKITDFGVSAMLASSMGQRDTFVGTYNYMSPERISGGTYDYSSDIWSLGLVVLECAIGRFPYLQSEEQQSWPSFYELLEAIVAKPPPSAPPDQFSPEFCSFVSACIKKDPKERSSSLDLLNHPFIKKFEDKDIDVGILVGSLDPPVVKSMIS 356
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2311386 2314819 + CePI673135_11g002140.1 Cec11g0214 215426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g0214 356 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524(InterPro)
Cec11g0214 356 ProSiteProfiles Protein kinase domain profile. 69 329 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g0214 356 Gene3D Phosphorylase Kinase; domain 1 38 148 - -
Cec11g0214 356 SMART serkin_6 69 329 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g0214 356 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec11g0214 356 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 45 342 - GO:0000165(PANTHER)|GO:0004708(PANTHER)
Cec11g0214 356 FunFam Mitogen-activated protein kinase kinase 6 150 348 - -
Cec11g0214 356 FunFam Mitogen-activated protein kinase kinase 6 39 148 - -
Cec11g0214 356 Gene3D Transferase(Phosphotransferase) domain 1 150 343 - -
Cec11g0214 356 CDD PKc_MAPKK_plant_like 67 333 - -
Cec11g0214 356 SUPERFAMILY Protein kinase-like (PK-like) 67 337 IPR011009 -
Cec11g0214 356 Pfam Protein kinase domain 70 329 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec07g1538 Cec-Chr7:30964063 Cec11g0214 Cec-Chr11:2311386 2.90E-54 dispersed
Cec10g1402 Cec-Chr10:28358272 Cec11g0214 Cec-Chr11:2311386 8.50E-66 dispersed
Cec11g0175 Cec-Chr11:1928528 Cec11g0214 Cec-Chr11:2311386 2.60E-113 dispersed
Cec11g0214 Cec-Chr11:2311386 Cec06g0235 Cec-Chr6:2506987 1.50E-26 dispersed
Cec11g0214 Cec-Chr11:2311386 Cec03g1594 Cec-Chr3:34045737 3.30E-127 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72378 PF00069 Pkinase 1.50E-66 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g0214 K04368 - csv:101218848 674.47