Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g0247 ATGGGGGAAGAAGATTCCGTGGGTGCGTCTCAGAAGAAGGCTCAATCAGATGGTGCAGCGTTGAGTAATTCTTCGTCATCGGATATTCCGTCTAAGAAGCTCGCTAGGCAGCTCGATTTCACCGGCTATGGAGGTGCCTCGCATCCTCAATCTCATTCAAACTCGCATTCACAGTCACAGGCTCCATTAGTTGCGCAGAATCTTCCGCAAGCTCAGCCAAAGCCACAGACGCAGACGCAGATGGTGGCCGCGGCGATCGCACCTTTGGCTCCTCATTCGTCTGTAAGAGCTGTGAAACCGGAATCACCAATGTCAAGAGCAAGACCTGCTGTTGAAGCTAAAGACAGTACTCCTAAGAAGCAAAAACAGTGTAACTGTAAACACTCGCGGTGTCTAAAATTGTACTGTGAATGCTTTGCTTCTGGAATATATTGTGATGGTTGCAACTGCATCAATTGTTATAACAATGTCGAAAATGATGCTGCTAGAAGAGAAGCAGTTGAAGCTACATTAGAGCGTAATCCAAATGCATTTCGACCCAAAATTGCCAGCAGCCCTCATGGAATGCGGGACAGCAGGGAGGAGGCGGGGGAGTTGCTGATGTTGGGTAAGCACAATAAGGGGTGCCACTGCAAGAAATCGGGTTGTCTAAAAAAGTATTGCGAGTGTTTCCAGGCCAACATTCTCTGTTCAGAAAATTGTAAATGCATGGATTGCAAGAATTTTGAGGGAAGTGAAGAGAGGCAAGCTCTTTTCCATGGAGACCATGGTAACAACATGACATTCATTCAACAGGCAGCTAATGCTGCCATAACTGGAGCTATTGGCTCCTCTGGTTATGCTTCACCTCCTGTATCCAAGAAAAGAAAAGGTCAAGAACTCTACTTTGGACCAACAGCCAAGGACATGTCCACCCATAGACCAGTGGCATTTCAACAGGTAAATCATATCAGAGCCACTGCTCCTCCGCTACCGTCCTTCCCCATTGCTGGTGTAGGTAGCCCGTCGGTGTTGGGTCCTTCAAAGTTCACGTATAGGTCTTTAATGGCAGACATCATTCAATCTCAAGATTTGAAGGATCTTTGCTCTGTTTTGGTTGTGCTGTCGAGTGAAGCTGCCAAGACAATTCAAGACCAAACAAGTGCTACAGAAAAGCAATCTGATGGCCAGACTGAAACTTCTGTTGCGTCATCCTCTCAAGATAGGTTGCAGAAAAAAGATGCATCTGATGACAAAGCTGCAGCCGATGATCGTTCTAGTGCAAACCAGGCTGATAAAACCACCCCCGACGATTCCAATTCAGATGGTGGAGATGTGCCAAAGGGCGCACCCATGTCTCCCGGAACTTTAGCTTTGATGTGTGATGAGCAAGATACAATGCTAATGGCTGCTGCTTCCCCTAATAGACTAATGGGTCCTGGCTGCAGCACCTCTTCACAACTGCCTCACGGACGAGACACGTCAGAGGTCTATGCAGAGCAGGAGAGGATCGTCCTTACAAAGTTTAGGGATTGTCTTAATAGACTCATCACTTTGGGAGAGATAAAAGAGACACAATGTTCATCTTTAGCCAGAAGTGAAGTAGGTAATCAAGAACAACAATTTAACAATGGCACTACAAATTCTAGAACTGAAACTCAAAGTAATTTGGGCCAACTCAACAATAAAGTTACGAAATCTTCAATTACACCATCAGTGAAGACATCGCAGACGGTAACAACCCCAGCAGTTATGACCCTTAGTAACGACCAGCGACAGAAAGTTTTGCCTCTGTCTTGA 1779 46.09 MGEEDSVGASQKKAQSDGAALSNSSSSDIPSKKLARQLDFTGYGGASHPQSHSNSHSQSQAPLVAQNLPQAQPKPQTQTQMVAAAIAPLAPHSSVRAVKPESPMSRARPAVEAKDSTPKKQKQCNCKHSRCLKLYCECFASGIYCDGCNCINCYNNVENDAARREAVEATLERNPNAFRPKIASSPHGMRDSREEAGELLMLGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDHGNNMTFIQQAANAAITGAIGSSGYASPPVSKKRKGQELYFGPTAKDMSTHRPVAFQQVNHIRATAPPLPSFPIAGVGSPSVLGPSKFTYRSLMADIIQSQDLKDLCSVLVVLSSEAAKTIQDQTSATEKQSDGQTETSVASSSQDRLQKKDASDDKAAADDRSSANQADKTTPDDSNSDGGDVPKGAPMSPGTLALMCDEQDTMLMAAASPNRLMGPGCSTSSQLPHGRDTSEVYAEQERIVLTKFRDCLNRLITLGEIKETQCSSLARSEVGNQEQQFNNGTTNSRTETQSNLGQLNNKVTKSSITPSVKTSQTVTTPAVMTLSNDQRQKVLPLS 592
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2634808 2638817 + CePI673135_11g002470.1 Cec11g0247 215459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g0247 592 MobiDBLite consensus disorder prediction 529 549 - -
Cec11g0247 592 MobiDBLite consensus disorder prediction 375 450 - -
Cec11g0247 592 MobiDBLite consensus disorder prediction 420 434 - -
Cec11g0247 592 MobiDBLite consensus disorder prediction 44 79 - -
Cec11g0247 592 MobiDBLite consensus disorder prediction 9 32 - -
Cec11g0247 592 SMART CXC_2 119 159 IPR033467 -
Cec11g0247 592 SMART CXC_2 204 245 IPR033467 -
Cec11g0247 592 MobiDBLite consensus disorder prediction 94 118 - -
Cec11g0247 592 MobiDBLite consensus disorder prediction 403 419 - -
Cec11g0247 592 MobiDBLite consensus disorder prediction 1 79 - -
Cec11g0247 592 PANTHER TESMIN/TSO1-RELATED 31 520 IPR028307 GO:0005634(PANTHER)|GO:0006355(PANTHER)
Cec11g0247 592 MobiDBLite consensus disorder prediction 375 402 - -
Cec11g0247 592 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 207 241 IPR005172 -
Cec11g0247 592 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 121 156 IPR005172 -
Cec11g0247 592 ProSiteProfiles CRC domain profile. 120 244 IPR005172 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec08g1356 Cec-Chr8:25493608 Cec11g0247 Cec-Chr11:2634808 2.40E-27 dispersed
Cec11g0247 Cec-Chr11:2634808 Cec06g0948 Cec-Chr6:13038286 9.20E-167 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30491 PF03638 TCR 3.10E-12 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g0247 - - - 0.0