Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g0254 ATGTCAACCCCTACTCCGGCGCCGACGTCTCCGCCGGCGACCAATACGACGTCTCCGCCGCCACCAACCCCTAGTGCTCCGCCACCATCGACTCCAACGCAACCTCCGCCGTCCACTACACCACCACCAACAACCACTCCGTCGCCGCCTCCGCCTTCCGCTGCAACGCCGCCCACTCCTTCTCGGCCCCCGCCGACTTCCGCGCCACCTCCGGCCACCCCGTCACTGCCTCCACCGTCTACTCCCCAACCCGCCCCGCCCACTGCATCTCCCTCGCCGCCGGCTTCCACCCCTCCGCCGTCCAGGCCTTCGACTTCTCCACCTCCTCCGTCTTCTACTAGCCCTCCGTCTCCTCCAACTGGCCGTAGTCCGCCGCCACCAACTTCTCGTACGCCGTCCACTCCGTCAAGAAGTCCTCCACCTCCCTCAACGTCGTCGTCGTCCTCCTCCTCTTCTAATATTTCAACTGGACTTGTCGTCGGAATTGCAATTGGTGGAGTGGTAATTGTTCTTCTGCTAAGTATATTGTGCCTTTGTTGTACGAAGAAAAGGAGAAAACGACGCGATGAAGAGGGATTTTATCCACACCCTCCGCCTGGCCCTAAAGTTGACCCTTATGCTGGTCAGCAGCAATGGCAGCACAATGCTCCTCTACCGCCTGATCCTTTAATCGGGACGGTGCCTAAGCCATCTCCTCCTCCGGTAGTTGCATCTCGACCCCCGCATTCTCCGACTGGCGTTCGTCCTCCACCTCAACCGCTCTATATGAGTAGCAGTGGAGGTTCGGGTTCTATGTATTCTGGGCCTGAAACGCCGCTCCCTCCGCCACCTCCCCCTCCTATGGCCTTTGGTTTCTCAAAGAGTACTTTTACTTATGAGGAATTGGCAATGGCGACGGATGGCTTCTCGGATGCAAATCTCCTCGGACAAGGTGGATTCGGATATGTGCATAGAGGAGTTCTTCCTAATGGAAAGGAAGTTGCAGTCAAGCAGTTGAAAGCTGGGAGCGGGCAGGGCGAACGAGAATTTCAGGCCGAAGTTGATATTATCAGCCGAGTTCATCATAAACATCTTGTTTCTTTGGTTGGATATTGCATAACTGGGTCTCAAAGATTGCTTGTTTATGAGTTTGTTCCAAACAACACTTTAGAGTTCCATTTACATGGTAAAGGGCGGCCAACGATGGATTGGCAGACGAGACTTAAAATCGCATTAGGATCAGCAAAAGGACTAGCTTATATTCATGAGGATTGTCACCCGAAAATCATTCATCGCGATATTAAGGCTGCTAACATATTGTTAGATTTCAAGTTTGAAGCAAAGGTTGCTGATTTTGGACTTGCAAAGTTTACTTCCGATGTCAATACCCATGTATCAACTCGAGTGATGGGTACTTTTGGGTATCTTGCACCAGAGTATGCCTCTAGTGGCAAACTTACTGAGAAATCAGATGTTTTCTCCTTTGGGGTTATGCTTTTGGAGTTGATCACTGGTCGTCGACCAGTCGATATGAGTAATACTTCCATGGAAGATAGTCTTGTGGACTGGGCTAGGCCGCTAATGAACCGAGCTTTAGAAGATGGAAACTTTGATGCTTTGATCGATCCAAGGATGCAAAACAACTACAACCACAATGAGATGGCTCGCATGGTTGCCTGTGCTGCTGCTTGTGTTCGACATTCTGCTAGGCGTCGGCCACGAATGAGTCAGGTAGTACGAGCGCTCGAAGGAGACACATCACTATCGGATCTCAACGAAGGAGTGAAACCCGGGCAGAGCACAATGTACAGTTCTCATGGAAGCTCAGATTATGACACCCACCAGTACAACGAGGACTTGAGAAAGTTCAGGAAGATGGCACTGGGAAGTACAGAATATGGAGCAAGCAGCGAATACAGCGGACCAACGAGCGAGTACGGGCTGTATCCTTCGGGATCGAGCAGCGAAGGGCAAACCACCAGAGAAATGGAGATGAGAACAGCAAAGAAAGAAAGTGGAGGCTTCAGTGGACGCTCTTGA 2019 51.81 MSTPTPAPTSPPATNTTSPPPPTPSAPPPSTPTQPPPSTTPPPTTTPSPPPPSAATPPTPSRPPPTSAPPPATPSLPPPSTPQPAPPTASPSPPASTPPPSRPSTSPPPPSSTSPPSPPTGRSPPPPTSRTPSTPSRSPPPPSTSSSSSSSSNISTGLVVGIAIGGVVIVLLLSILCLCCTKKRRKRRDEEGFYPHPPPGPKVDPYAGQQQWQHNAPLPPDPLIGTVPKPSPPPVVASRPPHSPTGVRPPPQPLYMSSSGGSGSMYSGPETPLPPPPPPPMAFGFSKSTFTYEELAMATDGFSDANLLGQGGFGYVHRGVLPNGKEVAVKQLKAGSGQGEREFQAEVDIISRVHHKHLVSLVGYCITGSQRLLVYEFVPNNTLEFHLHGKGRPTMDWQTRLKIALGSAKGLAYIHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKFTSDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDMSNTSMEDSLVDWARPLMNRALEDGNFDALIDPRMQNNYNHNEMARMVACAAACVRHSARRRPRMSQVVRALEGDTSLSDLNEGVKPGQSTMYSSHGSSDYDTHQYNEDLRKFRKMALGSTEYGASSEYSGPTSEYGLYPSGSSSEGQTTREMEMRTAKKESGGFSGRS 672
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2691823 2695082 - CePI673135_11g002540.1 Cec11g0254 215466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g0254 672 Gene3D Phosphorylase Kinase; domain 1 281 377 - -
Cec11g0254 672 MobiDBLite consensus disorder prediction 626 654 - -
Cec11g0254 672 MobiDBLite consensus disorder prediction 1 142 - -
Cec11g0254 672 PRINTS Proline rich extensin signature 49 74 - -
Cec11g0254 672 PRINTS Proline rich extensin signature 4 20 - -
Cec11g0254 672 PRINTS Proline rich extensin signature 24 41 - -
Cec11g0254 672 FunFam proline-rich receptor-like protein kinase PERK1 280 377 - -
Cec11g0254 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 422 434 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec11g0254 672 MobiDBLite consensus disorder prediction 1 154 - -
Cec11g0254 672 Gene3D Transferase(Phosphotransferase) domain 1 378 588 - -
Cec11g0254 672 MobiDBLite consensus disorder prediction 625 672 - -
Cec11g0254 672 ProSitePatterns Protein kinases ATP-binding region signature. 308 330 IPR017441 GO:0005524(InterPro)
Cec11g0254 672 SMART serkin_6 302 538 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g0254 672 Pfam Protein tyrosine and serine/threonine kinase 307 575 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec11g0254 672 MobiDBLite consensus disorder prediction 186 276 - -
Cec11g0254 672 MobiDBLite consensus disorder prediction 221 251 - -
Cec11g0254 672 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 125 619 IPR047117 -
Cec11g0254 672 ProSiteProfiles Protein kinase domain profile. 302 581 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g0254 672 SUPERFAMILY Protein kinase-like (PK-like) 277 575 IPR011009 -
Cec11g0254 672 FunFam Proline-rich receptor-like protein kinase PERK1 378 586 - -
Cec11g0254 672 MobiDBLite consensus disorder prediction 581 606 - -
Cec11g0254 672 MobiDBLite consensus disorder prediction 585 604 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g2763 Cec-Chr5:38083316 Cec11g0254 Cec-Chr11:2691823 1.90E-132 dispersed
Cec07g1003 Cec-Chr7:24464448 Cec11g0254 Cec-Chr11:2691823 1.30E-155 dispersed
Cec07g1364 Cec-Chr7:29242073 Cec11g0254 Cec-Chr11:2691823 2.20E-78 dispersed
Cec07g1449 Cec-Chr7:30094003 Cec11g0254 Cec-Chr11:2691823 5.00E-55 dispersed
Cec07g1481 Cec-Chr7:30408601 Cec11g0254 Cec-Chr11:2691823 2.70E-86 dispersed
Cec10g0926 Cec-Chr10:20516035 Cec11g0254 Cec-Chr11:2691823 7.20E-74 dispersed
Cec11g0254 Cec-Chr11:2691823 Cec11g0464 Cec-Chr11:4945963 1.30E-161 dispersed
Cec11g1780 Cec-Chr11:31983638 Cec11g0254 Cec-Chr11:2691823 1.00E-69 dispersed
Cec11g1781 Cec-Chr11:32008008 Cec11g0254 Cec-Chr11:2691823 4.60E-71 dispersed
Cec03g0853 Cec-Chr3:10471529 Cec11g0254 Cec-Chr11:2691823 2.40E-54 transposed
Cec11g0254 Cec-Chr11:2691823 Cec05g0266 Cec-Chr5:2197133 3.00E-39 wgd
Cec11g0254 Cec-Chr11:2691823 Cec06g0928 Cec-Chr6:12711115 1.90E-197 wgd
Cec11g0254 Cec-Chr11:2691823 Cec09g0234 Cec-Chr9:2017553 3.10E-62 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72381 PF07714 PK_Tyr_Ser-Thr 6.90E-47 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g0254 - - - 0.0