Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec11g0262 | ATGAAGAGCGATACCCATTTCAACATTCATCTTTTCTTACATTTTTTCCTCTTCTTTGGCACTTTTCTTTTGTGCCTTTCTTCTTCTTCTTCTGTTTCTGAAGAGTTTCTTCAAGTTTCCAGCCATGGCGGCCGAGGCCTTACTGACGCTGAAGCTCATTACATCCGTCAACGTCAACTCCTTTACTACAGAGATGAATTTGGCGACCGTGGTGAAGAAGTCGTCGTCGATCCTAAGCTTGTTTTTGAAAATGACAGAATCAGAAATGCTTACATAGCATTACAAGCTTGGAAGCAAGCGATTCTGTCTGACCCTTCAAATCTCACTCGGAATTGGGTTGGATCTGATGTTTGTCACTACACAGGGGTTTTCTGTGCTCCGGCGCCGGATAATTCATCGATCCGTACAGTTGCCGGAATTGACCTCAACCACGGCGACATTGCCGGGTACTTGCCGGAGGAGCTTGGTCTTCTTGTGGATCTTGCATTGTTCCATATAAACTCTAATCGGTTCTGTGGGACTGTTCCTCACAAGTTCAAGAACCTGAAGAGGTTGTTCGAGTTGGATCTGAGTAACAATCGCTTCGCCGGAAAATTCCCTCGGGTGGTTCTTGAGTTGCCGGAGCTGAAGTTTTTGGATCTGAGGTTCAACGAGTTTGAAGGGACTGTACCTAAGGAGCTTTTCGATAAGGATTTGGACGCCATTTTCATCAACCATAACAGATTCCGGTTCGAGTTACCGGAAAATTTCGGGAACTCGCCGGTTTCGGTTATTGTTCTTGCTAATAACAAATTTCATGGGTGTGTGCCGGGAAGCATTGGGAATATGACGAGATTGAATGAGATTATTCTGATGTATAATGGGTTTCGATCGTGTTTGCCGTCGGAGATTGGGTTTCTGAAGAATCTGACGGTGTTTGATGTGAGTTTTAATGAATTTTTTGGGAGTTTGCCGGAGACGATAGGTGGAATGGTGAGTTTGGAGCAGCTGAATGTGGCGCATAATTTCTTGTCTGGGAAGATTCCGGAGAGTATCTGTAAATTGCCGAATCTGCAGAACTTTACTTACTCTTATAATTTCTTTACGGGAGAGGCGCCGTCGTGCTTGGCGTTGCCGGATTTTGATGACCGGAGGAACTGTATACCGAAGCGGCCGGTGCAACGTTCTGAGAGGCAATGTAAGTCGTTCTTGTCTAAGCCTGTGGATTGCAGTTCTTTTGGATGTCCTTCTTATGTTGCTCCGTCGCCACCTGTGGTGGTGCCTTCTCCGCCACCTGTTGTTGTCCCATCGCCATCGCCACCTGTTTTCTCTCCTCCGCCACCTGAATCCGCTTCACATCCCATTTACCGGCCACTCCCTCCGCCACCGCCATCCCCATCTCCTCCTCCCCCACCTGTTTACTCTCCTCCTCCGCCTCCACCATCCCCGCCACCCCCGTCTCCACCACCCCCACCACCGCCAGTTTACTCTCCACCCCCACCTCCCCCGTCTCCTCCTCCGCCTTCTCCACCACCACCTTCCCCGCCCCCACCGGTCTACTCTCCACCTCCACCCCCACCATCACCACCCCCACCATCTCCACCGCCACCACCACCACCGGTTTACTCTCCGCCACCACCTCCACCATCTCCTCCTCCGCCGTCTCCTCCCCCACCATCGCCACCACCACCGGCGACGGTGTATTGCGTCCGACCATCACCCCCACCTCCACCACCAAATTCTCCCCCACCTCCTCCCTTGTTCTCTCCACCCCCACCTGTTTACTACTACAATTCACCGCCCCCGCCCAACTCTCCACCACCTCCGCCATTGTACTCTCCTCCACCACCGCCCAACTCGCCGCCTCCTCCGCCACATTCACCTCCACCACCAATCTATCCTTACTTATCTCCCCCACCTCCTCCACCTGTCTATTCTCCCCCTCCACCGGTCTATTCACCGCCCCCACCACCGCCGTGTATAGAGCCTCCCCCACCTCCACCGCCACCGTGTATAGAGTATCATGAACCCCCACCCCCACCATCACCCTCACCACCTCCGCCCATCCAATACCATCCTCCGCCGTCTCCTTCACCCCCACCCCCACCTGCACCGACCCCAGTTTACCATTCACCTCCTCCGCCGGTTTATCACTCTCCACCACCACCACCATCACCGTCGCCTCCTCCGCCACCTGCATCCCCACCACCATCACCTGTATACGAAGGCCCATTGCCACCAATCTATGGAGTTTCGTACGCCTCTCCTCCACCTCCACCCTTCTATTGA | 2268 | 53.26 | MKSDTHFNIHLFLHFFLFFGTFLLCLSSSSSVSEEFLQVSSHGGRGLTDAEAHYIRQRQLLYYRDEFGDRGEEVVVDPKLVFENDRIRNAYIALQAWKQAILSDPSNLTRNWVGSDVCHYTGVFCAPAPDNSSIRTVAGIDLNHGDIAGYLPEELGLLVDLALFHINSNRFCGTVPHKFKNLKRLFELDLSNNRFAGKFPRVVLELPELKFLDLRFNEFEGTVPKELFDKDLDAIFINHNRFRFELPENFGNSPVSVIVLANNKFHGCVPGSIGNMTRLNEIILMYNGFRSCLPSEIGFLKNLTVFDVSFNEFFGSLPETIGGMVSLEQLNVAHNFLSGKIPESICKLPNLQNFTYSYNFFTGEAPSCLALPDFDDRRNCIPKRPVQRSERQCKSFLSKPVDCSSFGCPSYVAPSPPVVVPSPPPVVVPSPSPPVFSPPPPESASHPIYRPLPPPPPSPSPPPPPVYSPPPPPPSPPPPSPPPPPPPVYSPPPPPPSPPPPSPPPPSPPPPVYSPPPPPPSPPPPSPPPPPPPVYSPPPPPPSPPPPSPPPPSPPPPATVYCVRPSPPPPPPNSPPPPPLFSPPPPVYYYNSPPPPNSPPPPPLYSPPPPPNSPPPPPHSPPPPIYPYLSPPPPPPVYSPPPPVYSPPPPPPCIEPPPPPPPPCIEYHEPPPPPSPSPPPPIQYHPPPSPSPPPPPAPTPVYHSPPPPVYHSPPPPPSPSPPPPPASPPPSPVYEGPLPPIYGVSYASPPPPPFY | 755 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 2811538 | 2813805 | + | CePI673135_11g002620.1 | Cec11g0262 | 215474 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec11g0262 | 755 | Pfam | Leucine Rich Repeat | 302 | 324 | IPR001611 | GO:0005515(InterPro) | |
Cec11g0262 | 755 | Pfam | Leucine Rich Repeat | 326 | 348 | IPR001611 | GO:0005515(InterPro) | |
Cec11g0262 | 755 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 25 | 754 | IPR051582 | - | |
Cec11g0262 | 755 | MobiDBLite | consensus disorder prediction | 595 | 622 | - | - | |
Cec11g0262 | 755 | PRINTS | Proline rich extensin signature | 470 | 486 | - | - | |
Cec11g0262 | 755 | PRINTS | Proline rich extensin signature | 409 | 425 | - | - | |
Cec11g0262 | 755 | PRINTS | Proline rich extensin signature | 443 | 464 | - | - | |
Cec11g0262 | 755 | PRINTS | Proline rich extensin signature | 431 | 443 | - | - | |
Cec11g0262 | 755 | Pfam | Leucine rich repeat N-terminal domain | 93 | 125 | IPR013210 | - | |
Cec11g0262 | 755 | FunFam | Leucine-rich repeat extensin-like protein 1 | 91 | 252 | - | - | |
Cec11g0262 | 755 | Gene3D | Ribonuclease Inhibitor | 91 | 251 | IPR032675 | - | |
Cec11g0262 | 755 | MobiDBLite | consensus disorder prediction | 429 | 577 | - | - | |
Cec11g0262 | 755 | FunFam | Leucine-rich repeat extensin-like protein 5 | 253 | 392 | - | - | |
Cec11g0262 | 755 | Gene3D | Ribonuclease Inhibitor | 252 | 395 | IPR032675 | - | |
Cec11g0262 | 755 | MobiDBLite | consensus disorder prediction | 664 | 741 | - | - | |
Cec11g0262 | 755 | Pfam | Leucine rich repeat | 163 | 218 | IPR001611 | GO:0005515(InterPro) | |
Cec11g0262 | 755 | SUPERFAMILY | L domain-like | 91 | 371 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec07g0286 | Cec-Chr7:2825988 | Cec11g0262 | Cec-Chr11:2811538 | 8.00E-29 | dispersed | |
Cec11g0262 | Cec-Chr11:2811538 | Cec06g1179 | Cec-Chr6:23995130 | 3.70E-72 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec11g0262 | - | - | - | 0.0 |