Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g0262 ATGAAGAGCGATACCCATTTCAACATTCATCTTTTCTTACATTTTTTCCTCTTCTTTGGCACTTTTCTTTTGTGCCTTTCTTCTTCTTCTTCTGTTTCTGAAGAGTTTCTTCAAGTTTCCAGCCATGGCGGCCGAGGCCTTACTGACGCTGAAGCTCATTACATCCGTCAACGTCAACTCCTTTACTACAGAGATGAATTTGGCGACCGTGGTGAAGAAGTCGTCGTCGATCCTAAGCTTGTTTTTGAAAATGACAGAATCAGAAATGCTTACATAGCATTACAAGCTTGGAAGCAAGCGATTCTGTCTGACCCTTCAAATCTCACTCGGAATTGGGTTGGATCTGATGTTTGTCACTACACAGGGGTTTTCTGTGCTCCGGCGCCGGATAATTCATCGATCCGTACAGTTGCCGGAATTGACCTCAACCACGGCGACATTGCCGGGTACTTGCCGGAGGAGCTTGGTCTTCTTGTGGATCTTGCATTGTTCCATATAAACTCTAATCGGTTCTGTGGGACTGTTCCTCACAAGTTCAAGAACCTGAAGAGGTTGTTCGAGTTGGATCTGAGTAACAATCGCTTCGCCGGAAAATTCCCTCGGGTGGTTCTTGAGTTGCCGGAGCTGAAGTTTTTGGATCTGAGGTTCAACGAGTTTGAAGGGACTGTACCTAAGGAGCTTTTCGATAAGGATTTGGACGCCATTTTCATCAACCATAACAGATTCCGGTTCGAGTTACCGGAAAATTTCGGGAACTCGCCGGTTTCGGTTATTGTTCTTGCTAATAACAAATTTCATGGGTGTGTGCCGGGAAGCATTGGGAATATGACGAGATTGAATGAGATTATTCTGATGTATAATGGGTTTCGATCGTGTTTGCCGTCGGAGATTGGGTTTCTGAAGAATCTGACGGTGTTTGATGTGAGTTTTAATGAATTTTTTGGGAGTTTGCCGGAGACGATAGGTGGAATGGTGAGTTTGGAGCAGCTGAATGTGGCGCATAATTTCTTGTCTGGGAAGATTCCGGAGAGTATCTGTAAATTGCCGAATCTGCAGAACTTTACTTACTCTTATAATTTCTTTACGGGAGAGGCGCCGTCGTGCTTGGCGTTGCCGGATTTTGATGACCGGAGGAACTGTATACCGAAGCGGCCGGTGCAACGTTCTGAGAGGCAATGTAAGTCGTTCTTGTCTAAGCCTGTGGATTGCAGTTCTTTTGGATGTCCTTCTTATGTTGCTCCGTCGCCACCTGTGGTGGTGCCTTCTCCGCCACCTGTTGTTGTCCCATCGCCATCGCCACCTGTTTTCTCTCCTCCGCCACCTGAATCCGCTTCACATCCCATTTACCGGCCACTCCCTCCGCCACCGCCATCCCCATCTCCTCCTCCCCCACCTGTTTACTCTCCTCCTCCGCCTCCACCATCCCCGCCACCCCCGTCTCCACCACCCCCACCACCGCCAGTTTACTCTCCACCCCCACCTCCCCCGTCTCCTCCTCCGCCTTCTCCACCACCACCTTCCCCGCCCCCACCGGTCTACTCTCCACCTCCACCCCCACCATCACCACCCCCACCATCTCCACCGCCACCACCACCACCGGTTTACTCTCCGCCACCACCTCCACCATCTCCTCCTCCGCCGTCTCCTCCCCCACCATCGCCACCACCACCGGCGACGGTGTATTGCGTCCGACCATCACCCCCACCTCCACCACCAAATTCTCCCCCACCTCCTCCCTTGTTCTCTCCACCCCCACCTGTTTACTACTACAATTCACCGCCCCCGCCCAACTCTCCACCACCTCCGCCATTGTACTCTCCTCCACCACCGCCCAACTCGCCGCCTCCTCCGCCACATTCACCTCCACCACCAATCTATCCTTACTTATCTCCCCCACCTCCTCCACCTGTCTATTCTCCCCCTCCACCGGTCTATTCACCGCCCCCACCACCGCCGTGTATAGAGCCTCCCCCACCTCCACCGCCACCGTGTATAGAGTATCATGAACCCCCACCCCCACCATCACCCTCACCACCTCCGCCCATCCAATACCATCCTCCGCCGTCTCCTTCACCCCCACCCCCACCTGCACCGACCCCAGTTTACCATTCACCTCCTCCGCCGGTTTATCACTCTCCACCACCACCACCATCACCGTCGCCTCCTCCGCCACCTGCATCCCCACCACCATCACCTGTATACGAAGGCCCATTGCCACCAATCTATGGAGTTTCGTACGCCTCTCCTCCACCTCCACCCTTCTATTGA 2268 53.26 MKSDTHFNIHLFLHFFLFFGTFLLCLSSSSSVSEEFLQVSSHGGRGLTDAEAHYIRQRQLLYYRDEFGDRGEEVVVDPKLVFENDRIRNAYIALQAWKQAILSDPSNLTRNWVGSDVCHYTGVFCAPAPDNSSIRTVAGIDLNHGDIAGYLPEELGLLVDLALFHINSNRFCGTVPHKFKNLKRLFELDLSNNRFAGKFPRVVLELPELKFLDLRFNEFEGTVPKELFDKDLDAIFINHNRFRFELPENFGNSPVSVIVLANNKFHGCVPGSIGNMTRLNEIILMYNGFRSCLPSEIGFLKNLTVFDVSFNEFFGSLPETIGGMVSLEQLNVAHNFLSGKIPESICKLPNLQNFTYSYNFFTGEAPSCLALPDFDDRRNCIPKRPVQRSERQCKSFLSKPVDCSSFGCPSYVAPSPPVVVPSPPPVVVPSPSPPVFSPPPPESASHPIYRPLPPPPPSPSPPPPPVYSPPPPPPSPPPPSPPPPPPPVYSPPPPPPSPPPPSPPPPSPPPPVYSPPPPPPSPPPPSPPPPPPPVYSPPPPPPSPPPPSPPPPSPPPPATVYCVRPSPPPPPPNSPPPPPLFSPPPPVYYYNSPPPPNSPPPPPLYSPPPPPNSPPPPPHSPPPPIYPYLSPPPPPPVYSPPPPVYSPPPPPPCIEPPPPPPPPCIEYHEPPPPPSPSPPPPIQYHPPPSPSPPPPPAPTPVYHSPPPPVYHSPPPPPSPSPPPPPASPPPSPVYEGPLPPIYGVSYASPPPPPFY 755
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2811538 2813805 + CePI673135_11g002620.1 Cec11g0262 215474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g0262 755 Pfam Leucine Rich Repeat 302 324 IPR001611 GO:0005515(InterPro)
Cec11g0262 755 Pfam Leucine Rich Repeat 326 348 IPR001611 GO:0005515(InterPro)
Cec11g0262 755 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 25 754 IPR051582 -
Cec11g0262 755 MobiDBLite consensus disorder prediction 595 622 - -
Cec11g0262 755 PRINTS Proline rich extensin signature 470 486 - -
Cec11g0262 755 PRINTS Proline rich extensin signature 409 425 - -
Cec11g0262 755 PRINTS Proline rich extensin signature 443 464 - -
Cec11g0262 755 PRINTS Proline rich extensin signature 431 443 - -
Cec11g0262 755 Pfam Leucine rich repeat N-terminal domain 93 125 IPR013210 -
Cec11g0262 755 FunFam Leucine-rich repeat extensin-like protein 1 91 252 - -
Cec11g0262 755 Gene3D Ribonuclease Inhibitor 91 251 IPR032675 -
Cec11g0262 755 MobiDBLite consensus disorder prediction 429 577 - -
Cec11g0262 755 FunFam Leucine-rich repeat extensin-like protein 5 253 392 - -
Cec11g0262 755 Gene3D Ribonuclease Inhibitor 252 395 IPR032675 -
Cec11g0262 755 MobiDBLite consensus disorder prediction 664 741 - -
Cec11g0262 755 Pfam Leucine rich repeat 163 218 IPR001611 GO:0005515(InterPro)
Cec11g0262 755 SUPERFAMILY L domain-like 91 371 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec07g0286 Cec-Chr7:2825988 Cec11g0262 Cec-Chr11:2811538 8.00E-29 dispersed
Cec11g0262 Cec-Chr11:2811538 Cec06g1179 Cec-Chr6:23995130 3.70E-72 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g0262 - - - 0.0