Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g0278 ATGGCTGCTGCAATTTCTCTTTGCTCTGTTTTTCTTCTTCTTCTTCTGACTCGGTGGGTCGACTCGGAGCCGACTCAGGATCGACAAGCCCTTCTCGATTTCTTCTCTAAAACTCCTCACGCCAATCGGGTTCAATGGAATACTTCTAATTCTGTCTGTAATTGGGTTGGCGTTGAGTGCGATTCGAATCAGTCGTTTGTTTACTCTCTTCGTTTGCCTGGTGTTGGCCTTGTCGGACCGATTCCGGCCAATACAATCGGGAAATTGACTCAGCTCCGAGTTCTCAGTCTCCGTTCCAACCGTCTCTCCGGCGAGATCCCATCGGATTTTTCCAATTTAGTAATGCTGCGGAATCTGTATCTTCAGGATAATGCTTTCTCCGGCGAGTTTCCGTCGAGTTTGACTTGGTTGACTCGGCTTACTCGGCTGGATTTGTCGTCGAACGAATTCTCCGGTCCGATTCCGCCGTCTGTTGACAATCTGACTCACTTGAGTGGGATTTTCTTGCAGAACAATGGGTTCTCCGGTTCACTCCCGAGTATCTCAGCCGTTAATTTAACAAACTTCAATGTCTCTAACAACAAACTCAACGGTTCGATTCCGAAATCGTTGGCTAAATTCCCCACCTCCTCCTTCGCCGGGAACTTAGATCTCTGCGGCGGACCATTCCCACCCTGCAACCCATTCACTCCCTCTCCATCTCCGTCACAAAACCCTTCACCAGCCCACAAAAAATCGAAGAAACTCTCCACAGCGGCGATAATCGGAATCATAATCGGCGCCGTTTTCGCAGCTTTTCTTCTCCTCCTCTTCCTCATCCTCTGCATTCGGCGGAGGTCCCGCGGACAACAGACGAAGTCAGCGAAGCCACCATCGGCGGTGGGAACGGCAGCTCGATCAATTCCAGTAGCAGAGGTCGGAACGTCGTCGTCGAAAGACGACATTACCGGAGGATCAGTGGAGGCGACGGAGAGGAATAAGCTGGTGTTCTTCGAAGGAGGGATTTACAACTTCGATTTGGAGGATTTGTTGAGAGCTTCGGCGGAGGTATTGGGGAAAGGAAGCGTGGGAACGTCGTACAAGGCGGTACTAGAAGAAGGGACGACGGTGGTGGTGAAGCGGCTGAAGGATGTGGTGGTGACGAAGAAAGAATTCGAAACTCAAATGGAAATTTTAGGGAAAATTAAACATGAAAATGTGGTTCCTCTCAGAGCATTTTACTTCTCCAAAGATGAAAAACTGCTTGTTTATGATTACATCTCCACCGGAAGTTTGTCGGCAAGCCTTCACGGAAGCAGAGGCTCCGGCAGGACGCCGTTGGACTGGGATTCAAGAATGAGAATAGCTCTAAGCGCCGGCAGGGGATTAGCGCATCTCCACCTCGCCGGCAAGGTCGTTCACGGCAACATTAAATCCTCCAACATCCTTCTCCGCCCGGATCACGACGCCTGCATCTCCGATTTCGGCCTAAACCCACTCTTCGGCACCGCCACGCCGCCGAATCGCGTCGCCGGCTACCGGGCGCCGGAGGTCGTCGAAACCCGAAAAGTCACATTCAAATCCGACGTTTACAGCTACGGCGTTCTCCTCCTTGAGCTCCTGACCGGGAAAGCCCCGAACCAGCAATCCCTCGGCGAGGAGGGAATCGACCTTCCCCGGTGGGTCCAGTCCGTCGTCCGGGAGGAATGGACGGCGGAGGTTTTCGACGCGGAGCTGATGCGGTTCCATAACATTGAAGAAGAGATGGTTCAATTACTGCAGATCGCAATGTCCTGCGTTTCGACGGTTCCCGATCAGCGGCCGGCCATGCCGGAAGTTGTACGGATGATCGAAGATATGAACAGTCATAGAAGTGAGACCGATGACGGGTTGCGCCAGTCTTCCGATGACCCTTCGAAAGGATCGGATGTGAACACGCCGCCGGCGGAATCTAGAACTCCGCCGAGAGTGACGCCGTAG 1959 52.68 MAAAISLCSVFLLLLLTRWVDSEPTQDRQALLDFFSKTPHANRVQWNTSNSVCNWVGVECDSNQSFVYSLRLPGVGLVGPIPANTIGKLTQLRVLSLRSNRLSGEIPSDFSNLVMLRNLYLQDNAFSGEFPSSLTWLTRLTRLDLSSNEFSGPIPPSVDNLTHLSGIFLQNNGFSGSLPSISAVNLTNFNVSNNKLNGSIPKSLAKFPTSSFAGNLDLCGGPFPPCNPFTPSPSPSQNPSPAHKKSKKLSTAAIIGIIIGAVFAAFLLLLFLILCIRRRSRGQQTKSAKPPSAVGTAARSIPVAEVGTSSSKDDITGGSVEATERNKLVFFEGGIYNFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVVVTKKEFETQMEILGKIKHENVVPLRAFYFSKDEKLLVYDYISTGSLSASLHGSRGSGRTPLDWDSRMRIALSAGRGLAHLHLAGKVVHGNIKSSNILLRPDHDACISDFGLNPLFGTATPPNRVAGYRAPEVVETRKVTFKSDVYSYGVLLLELLTGKAPNQQSLGEEGIDLPRWVQSVVREEWTAEVFDAELMRFHNIEEEMVQLLQIAMSCVSTVPDQRPAMPEVVRMIEDMNSHRSETDDGLRQSSDDPSKGSDVNTPPAESRTPPRVTP 652
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3025179 3029964 + CePI673135_11g002780.1 Cec11g0278 215490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g0278 652 Gene3D Transferase(Phosphotransferase) domain 1 420 633 - -
Cec11g0278 652 Pfam Leucine rich repeat N-terminal domain 25 61 IPR013210 -
Cec11g0278 652 Gene3D Ribonuclease Inhibitor 186 226 IPR032675 -
Cec11g0278 652 Pfam Protein kinase domain 349 608 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g0278 652 SUPERFAMILY L domain-like 25 207 - -
Cec11g0278 652 FunFam Probable inactive receptor kinase RLK902 24 182 - -
Cec11g0278 652 MobiDBLite consensus disorder prediction 613 652 - -
Cec11g0278 652 ProSiteProfiles Protein kinase domain profile. 345 619 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g0278 652 FunFam pollen receptor-like kinase 1 315 419 - -
Cec11g0278 652 Gene3D Ribonuclease Inhibitor 24 182 IPR032675 -
Cec11g0278 652 Pfam Leucine Rich Repeat 116 135 IPR001611 GO:0005515(InterPro)
Cec11g0278 652 Pfam Leucine Rich Repeat 185 206 IPR001611 GO:0005515(InterPro)
Cec11g0278 652 Pfam Leucine Rich Repeat 91 113 IPR001611 GO:0005515(InterPro)
Cec11g0278 652 Pfam Leucine Rich Repeat 139 161 IPR001611 GO:0005515(InterPro)
Cec11g0278 652 MobiDBLite consensus disorder prediction 630 644 - -
Cec11g0278 652 Gene3D Phosphorylase Kinase; domain 1 313 419 - -
Cec11g0278 652 CDD STKc_IRAK 351 613 - -
Cec11g0278 652 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 420 624 - -
Cec11g0278 652 PANTHER OS05G0588300 PROTEIN 7 618 IPR050994 -
Cec11g0278 652 SUPERFAMILY Protein kinase-like (PK-like) 349 610 IPR011009 -
Cec11g0278 652 MobiDBLite consensus disorder prediction 613 629 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0205 Cec-Chr1:1988421 Cec11g0278 Cec-Chr11:3025179 4.60E-135 dispersed
Cec01g1590 Cec-Chr1:30557270 Cec11g0278 Cec-Chr11:3025179 1.50E-130 dispersed
Cec05g1032 Cec-Chr5:9014177 Cec11g0278 Cec-Chr11:3025179 2.10E-106 dispersed
Cec05g1305 Cec-Chr5:13138731 Cec11g0278 Cec-Chr11:3025179 8.00E-124 dispersed
Cec07g0532 Cec-Chr7:6314283 Cec11g0278 Cec-Chr11:3025179 1.90E-73 dispersed
Cec09g0907 Cec-Chr9:8588162 Cec11g0278 Cec-Chr11:3025179 9.70E-59 dispersed
Cec10g0930 Cec-Chr10:20539728 Cec11g0278 Cec-Chr11:3025179 3.10E-72 dispersed
Cec10g1964 Cec-Chr10:34432659 Cec11g0278 Cec-Chr11:3025179 2.70E-93 dispersed
Cec10g2242 Cec-Chr10:36754408 Cec11g0278 Cec-Chr11:3025179 1.70E-73 dispersed
Cec11g0147 Cec-Chr11:1732035 Cec11g0278 Cec-Chr11:3025179 7.30E-66 dispersed
Cec11g0278 Cec-Chr11:3025179 Cec11g1436 Cec-Chr11:28520153 8.50E-49 dispersed
Cec02g1991 Cec-Chr2:37756143 Cec11g0278 Cec-Chr11:3025179 6.00E-140 transposed
Cec07g0766 Cec-Chr7:15527307 Cec11g0278 Cec-Chr11:3025179 3.10E-77 transposed
Cec09g1996 Cec-Chr9:36979699 Cec11g0278 Cec-Chr11:3025179 4.00E-64 transposed
Cec11g0278 Cec-Chr11:3025179 Cec06g1205 Cec-Chr6:24677464 1.90E-221 wgd
Cec11g0278 Cec-Chr11:3025179 Cec08g0897 Cec-Chr8:20768069 1.10E-40 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72382 PF00069 Pkinase 4.80E-37 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g0278 - - - 0.0