Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec11g0297 | ATGATGGCCGGAAGCATAGGCAAAGACGAGTGGTCCGATTACGACAGTAGTTGCTCCTCCTCCGTAACCGTCCCAGACTCGAGCCGTAGCTGGATGAGCAACCTCAGCTTTGGAAGCCGGCGTCGCAGCAGTAGCTCAGCCGCAGAAGGCGGCGTGGAGATGAATAATACGACAACGACGACGACGACGACGACATTAGCATTACAAATGATGAAGCCACACAAGGCGAACGAAGTGGGATGGGAGGCCATGCGGTGGCTCCGGGGAGTGAAAGGGGAAGTGGGGTTGGAGAATTTCCGGCTGCTACGGCGGGTGGGGAGCGGAGATATTGGGAATGTTTATTTATGTGAGATAAGGAATCCAATGGTGGGGTTACCAAAGTGCTTTTATGCAATGAAAGTGGTTGATAGAGAAGCGGTTTGTGTGAGGAATAAAGAGAGAAGGGCAGATATGGAAAAGGAAATTTTGAAAGTGCTTGATCATCCTTTTTTGCCTACTCTTTATGCGGATTTTGAAGCTTCTCATTATTCTTGTTTGCTTATGGAGTTTTGTCCTGGTGGTGATTTGTATGCTGCTCGCCAACGTCAACCCAATAAACGTTTCTCCATTTCTTCTGCTAAATTTTATGCGGCGGAGATAATTTTAGCTTTAGAGTATTTGCACATGATGGGCATAATTTACCGAGATTTAAAGCCGGAAAACGTTTTAGTTAGAGAAGACGGCCACATAATGCTCTCGGATTTCGATCTCTGCCTCAAATGCGACGTCGTTCCAAAGCTCATCCGTTGCCGGACCACCGCCTCCGACGTCACCACCGAACGCCACGTCAGATCCTACTCCACCTCAACCACCTCCTGCGCCGCCGCCCCCATTCAACCCGTCCTCTCCTGTTTCTCCATCGCCCGTCGCACAAAATCCACCACCGTCACCACCATCACCGAACACGCCTCCGCCGCACCCGCCGCCGTGTACGGCGATGACAGCGACGGGGACGGCGAAGAATTCGACCCAGAACCAGAATTAATAGCGGAACCAATAAATGCTCGGTCGAAATCATTCGTTGGAACCCATGAGTATTTGGCGCCGGAGGTGATTTCCGGCCAAGGGCACGGCAGCGGTGTAGATTGGTGGACATTGGGAATATTCTTATACGAAATGTTGTACGGAAAGACACCATTTAAAGGGGAAAACAACGAGAAGACATTAATGAACATTTTGAAGCAGCCATTAAGGTTTCCAAGAATTGGGTTTAGTAGCAGCAAAGAGTATGAAGAAATGGTGAAAGTTGAGGATTTAATCAAGAAGCTTTTGGTGAAAAATCCCAAAAAAAGAATTGGAAGTTTAAAGGGTTCAGTTGAAATCAAAAGACATGATTTTTTCAAAGGACTGAATTGGGCTTTAATTCGATCCGTACGACCTCCACAAATCCCAAACAATAACCTTAATTACTCCAAATACCCTTCTAATTACTTACCCAAATTGAGCAAGAAACAAAGACAACAACCTTACCAAATCCCTAATCACCATTTTGATTATTTCTAA | 1542 | 46.82 | MMAGSIGKDEWSDYDSSCSSSVTVPDSSRSWMSNLSFGSRRRSSSSAAEGGVEMNNTTTTTTTTTLALQMMKPHKANEVGWEAMRWLRGVKGEVGLENFRLLRRVGSGDIGNVYLCEIRNPMVGLPKCFYAMKVVDREAVCVRNKERRADMEKEILKVLDHPFLPTLYADFEASHYSCLLMEFCPGGDLYAARQRQPNKRFSISSAKFYAAEIILALEYLHMMGIIYRDLKPENVLVREDGHIMLSDFDLCLKCDVVPKLIRCRTTASDVTTERHVRSYSTSTTSCAAAPIQPVLSCFSIARRTKSTTVTTITEHASAAPAAVYGDDSDGDGEEFDPEPELIAEPINARSKSFVGTHEYLAPEVISGQGHGSGVDWWTLGIFLYEMLYGKTPFKGENNEKTLMNILKQPLRFPRIGFSSSKEYEEMVKVEDLIKKLLVKNPKKRIGSLKGSVEIKRHDFFKGLNWALIRSVRPPQIPNNNLNYSKYPSNYLPKLSKKQRQQPYQIPNHHFDYF | 513 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 3207869 | 3210135 | - | CePI673135_11g002970.1 | Cec11g0297 | 215509 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec11g0297 | 513 | SMART | serkin_6 | 99 | 460 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec11g0297 | 513 | Gene3D | Phosphorylase Kinase; domain 1 | 97 | 187 | - | - | |
Cec11g0297 | 513 | MobiDBLite | consensus disorder prediction | 12 | 59 | - | - | |
Cec11g0297 | 513 | FunFam | protein kinase PINOID 2 | 97 | 183 | - | - | |
Cec11g0297 | 513 | MobiDBLite | consensus disorder prediction | 1 | 59 | - | - | |
Cec11g0297 | 513 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 225 | 237 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec11g0297 | 513 | CDD | STKc_phototropin_like | 99 | 477 | - | - | |
Cec11g0297 | 513 | ProSiteProfiles | Protein kinase domain profile. | 99 | 460 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec11g0297 | 513 | PANTHER | FLIPPASE KINASE 1-RELATED | 18 | 495 | - | GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER) | |
Cec11g0297 | 513 | FunFam | serine/threonine-protein kinase D6PK-like | 348 | 478 | - | - | |
Cec11g0297 | 513 | SUPERFAMILY | Protein kinase-like (PK-like) | 81 | 496 | IPR011009 | - | |
Cec11g0297 | 513 | Gene3D | Transferase(Phosphotransferase) domain 1 | 188 | 255 | - | - | |
Cec11g0297 | 513 | Pfam | Protein kinase domain | 350 | 460 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec11g0297 | 513 | Pfam | Protein kinase domain | 100 | 254 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec11g0297 | 513 | FunFam | protein kinase PINOID | 184 | 252 | - | - | |
Cec11g0297 | 513 | Gene3D | Transferase(Phosphotransferase) domain 1 | 348 | 478 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec03g0774 | Cec-Chr3:8659096 | Cec11g0297 | Cec-Chr11:3207869 | 5.80E-108 | dispersed | |
Cec05g0014 | Cec-Chr5:154017 | Cec11g0297 | Cec-Chr11:3207869 | 1.60E-112 | dispersed | |
Cec07g1158 | Cec-Chr7:26947970 | Cec11g0297 | Cec-Chr11:3207869 | 3.50E-92 | dispersed | |
Cec10g1395 | Cec-Chr10:28259783 | Cec11g0297 | Cec-Chr11:3207869 | 2.50E-113 | dispersed | |
Cec11g0297 | Cec-Chr11:3207869 | Cec11g0977 | Cec-Chr11:16173631 | 8.50E-36 | dispersed | |
Cec11g0297 | Cec-Chr11:3207869 | Cec04g1828 | Cec-Chr4:37009330 | 1.30E-113 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72383 | PF00069 | Pkinase | 3.30E-31 | CL0016 | Cec | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec11g0297 | K08286 | - | csv:101202905 | 850.892 |