Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g0297 ATGATGGCCGGAAGCATAGGCAAAGACGAGTGGTCCGATTACGACAGTAGTTGCTCCTCCTCCGTAACCGTCCCAGACTCGAGCCGTAGCTGGATGAGCAACCTCAGCTTTGGAAGCCGGCGTCGCAGCAGTAGCTCAGCCGCAGAAGGCGGCGTGGAGATGAATAATACGACAACGACGACGACGACGACGACATTAGCATTACAAATGATGAAGCCACACAAGGCGAACGAAGTGGGATGGGAGGCCATGCGGTGGCTCCGGGGAGTGAAAGGGGAAGTGGGGTTGGAGAATTTCCGGCTGCTACGGCGGGTGGGGAGCGGAGATATTGGGAATGTTTATTTATGTGAGATAAGGAATCCAATGGTGGGGTTACCAAAGTGCTTTTATGCAATGAAAGTGGTTGATAGAGAAGCGGTTTGTGTGAGGAATAAAGAGAGAAGGGCAGATATGGAAAAGGAAATTTTGAAAGTGCTTGATCATCCTTTTTTGCCTACTCTTTATGCGGATTTTGAAGCTTCTCATTATTCTTGTTTGCTTATGGAGTTTTGTCCTGGTGGTGATTTGTATGCTGCTCGCCAACGTCAACCCAATAAACGTTTCTCCATTTCTTCTGCTAAATTTTATGCGGCGGAGATAATTTTAGCTTTAGAGTATTTGCACATGATGGGCATAATTTACCGAGATTTAAAGCCGGAAAACGTTTTAGTTAGAGAAGACGGCCACATAATGCTCTCGGATTTCGATCTCTGCCTCAAATGCGACGTCGTTCCAAAGCTCATCCGTTGCCGGACCACCGCCTCCGACGTCACCACCGAACGCCACGTCAGATCCTACTCCACCTCAACCACCTCCTGCGCCGCCGCCCCCATTCAACCCGTCCTCTCCTGTTTCTCCATCGCCCGTCGCACAAAATCCACCACCGTCACCACCATCACCGAACACGCCTCCGCCGCACCCGCCGCCGTGTACGGCGATGACAGCGACGGGGACGGCGAAGAATTCGACCCAGAACCAGAATTAATAGCGGAACCAATAAATGCTCGGTCGAAATCATTCGTTGGAACCCATGAGTATTTGGCGCCGGAGGTGATTTCCGGCCAAGGGCACGGCAGCGGTGTAGATTGGTGGACATTGGGAATATTCTTATACGAAATGTTGTACGGAAAGACACCATTTAAAGGGGAAAACAACGAGAAGACATTAATGAACATTTTGAAGCAGCCATTAAGGTTTCCAAGAATTGGGTTTAGTAGCAGCAAAGAGTATGAAGAAATGGTGAAAGTTGAGGATTTAATCAAGAAGCTTTTGGTGAAAAATCCCAAAAAAAGAATTGGAAGTTTAAAGGGTTCAGTTGAAATCAAAAGACATGATTTTTTCAAAGGACTGAATTGGGCTTTAATTCGATCCGTACGACCTCCACAAATCCCAAACAATAACCTTAATTACTCCAAATACCCTTCTAATTACTTACCCAAATTGAGCAAGAAACAAAGACAACAACCTTACCAAATCCCTAATCACCATTTTGATTATTTCTAA 1542 46.82 MMAGSIGKDEWSDYDSSCSSSVTVPDSSRSWMSNLSFGSRRRSSSSAAEGGVEMNNTTTTTTTTTLALQMMKPHKANEVGWEAMRWLRGVKGEVGLENFRLLRRVGSGDIGNVYLCEIRNPMVGLPKCFYAMKVVDREAVCVRNKERRADMEKEILKVLDHPFLPTLYADFEASHYSCLLMEFCPGGDLYAARQRQPNKRFSISSAKFYAAEIILALEYLHMMGIIYRDLKPENVLVREDGHIMLSDFDLCLKCDVVPKLIRCRTTASDVTTERHVRSYSTSTTSCAAAPIQPVLSCFSIARRTKSTTVTTITEHASAAPAAVYGDDSDGDGEEFDPEPELIAEPINARSKSFVGTHEYLAPEVISGQGHGSGVDWWTLGIFLYEMLYGKTPFKGENNEKTLMNILKQPLRFPRIGFSSSKEYEEMVKVEDLIKKLLVKNPKKRIGSLKGSVEIKRHDFFKGLNWALIRSVRPPQIPNNNLNYSKYPSNYLPKLSKKQRQQPYQIPNHHFDYF 513
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3207869 3210135 - CePI673135_11g002970.1 Cec11g0297 215509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g0297 513 SMART serkin_6 99 460 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g0297 513 Gene3D Phosphorylase Kinase; domain 1 97 187 - -
Cec11g0297 513 MobiDBLite consensus disorder prediction 12 59 - -
Cec11g0297 513 FunFam protein kinase PINOID 2 97 183 - -
Cec11g0297 513 MobiDBLite consensus disorder prediction 1 59 - -
Cec11g0297 513 ProSitePatterns Serine/Threonine protein kinases active-site signature. 225 237 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec11g0297 513 CDD STKc_phototropin_like 99 477 - -
Cec11g0297 513 ProSiteProfiles Protein kinase domain profile. 99 460 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g0297 513 PANTHER FLIPPASE KINASE 1-RELATED 18 495 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Cec11g0297 513 FunFam serine/threonine-protein kinase D6PK-like 348 478 - -
Cec11g0297 513 SUPERFAMILY Protein kinase-like (PK-like) 81 496 IPR011009 -
Cec11g0297 513 Gene3D Transferase(Phosphotransferase) domain 1 188 255 - -
Cec11g0297 513 Pfam Protein kinase domain 350 460 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g0297 513 Pfam Protein kinase domain 100 254 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g0297 513 FunFam protein kinase PINOID 184 252 - -
Cec11g0297 513 Gene3D Transferase(Phosphotransferase) domain 1 348 478 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0774 Cec-Chr3:8659096 Cec11g0297 Cec-Chr11:3207869 5.80E-108 dispersed
Cec05g0014 Cec-Chr5:154017 Cec11g0297 Cec-Chr11:3207869 1.60E-112 dispersed
Cec07g1158 Cec-Chr7:26947970 Cec11g0297 Cec-Chr11:3207869 3.50E-92 dispersed
Cec10g1395 Cec-Chr10:28259783 Cec11g0297 Cec-Chr11:3207869 2.50E-113 dispersed
Cec11g0297 Cec-Chr11:3207869 Cec11g0977 Cec-Chr11:16173631 8.50E-36 dispersed
Cec11g0297 Cec-Chr11:3207869 Cec04g1828 Cec-Chr4:37009330 1.30E-113 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72383 PF00069 Pkinase 3.30E-31 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g0297 K08286 - csv:101202905 850.892