Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g0333 ATGGAGGAAAATGAAAACTGTGGCTGTTGGGCTGTCCTTAAACGCACCGTTTCAGATGTCTCCAAATCTTCCCCTTCTTCCAAACATTCCCCCAACTCCATTCCTCGCCTTACCTTACTTTACGATTCAGCTACCGAGACCCGATATTTAAACGCAAGCGACCGAGATTTGTGTGCGCCGGCCGAAGCTCGGCTATCCTTCGACAATGCTCCGCCGCTGCCGCCGACGAGGTTAGAGGACAAATTTAAACGCCAGTTACTGAAATTTTCATTTCAGGAACTAAGATCGGCGACCGGAAATTTCCGGCCGGATAGCATTCTGGGAGAAGGAGGGTTTGGATTCGTTTTCAAAGGATGGATTGAAGAGAATGGGACGGCGCCGGCCAAACCTGGATCAGGAATCACAGTCGCCGTCAAAAGCTTGAAACCGGATGGTCTTCAAGGACACAGAGAATGGGAGGCTGAGGTTAGCTTTCTTGGACAGCTTCACCATCCCAATCTTGTTAAACTTATTGGGTACTGTATTGAAGATGATCAAAGGCTTCTTGTATATGAATTTATGACGCGTGGTAGTCTTGAAAACCATCTTTTTAGAAGGACAATACCTCTTCCATGGTCAAACAGGATTAAAATTGCACTTGCTGCAGCCAAAGGCTTGGCCTTCCTCCACAATGGTCCGGAACCTGTCATATATAGAGATTTCAAAACATCAAACATATTGCTTGATACAGAGTACAATGCGAAGCTTTCGGATTTTGGTTTGGCAAAGGCTGGGCCTCAAGGAGACAAAACACATGTTTCCACCAGAGTAGTTGGAACATATGGCTATGCTGCGCCAGAATATCTAATGACAGGGCATTTGACATCAAAGAGTGATGTCTATAGCTTCGGTGTTGTCCTACTCGAGATCTTAACGGGGAGGAGATCAATGGACAAGAAACGTCCAAGTGGTGAGCAGAACCTAGTGTCATGGGCTCGACCATATGTAGATGACAAAAGGAAGCTTTACCATATAGTGGACCCTCGCTTGGAGCTTAACTACTCCATCCAGGGGGTTCAAAAAGTCTCTCGACTAGCTTCTCACTGCATCAGTAGAGATCCAAAATCTCGTCCTACCATGGATGAAGTTGTCAAGGTTCTCATTCCACTACAAGATCTTAACGACCTTGCCATCCTAGCATATCATTCACGCCTGTCTCAGCAAGGTCGACGAAAGAAGAAATCAGATGGACTACACCAGTTAACATACACCCAGTCAAGAAATATTAGAACCTCTCCTTTGAATGTTGGAGTTCATCGTCGTCGGTAA 1308 45.87 MEENENCGCWAVLKRTVSDVSKSSPSSKHSPNSIPRLTLLYDSATETRYLNASDRDLCAPAEARLSFDNAPPLPPTRLEDKFKRQLLKFSFQELRSATGNFRPDSILGEGGFGFVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWEAEVSFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALAAAKGLAFLHNGPEPVIYRDFKTSNILLDTEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYLMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVSWARPYVDDKRKLYHIVDPRLELNYSIQGVQKVSRLASHCISRDPKSRPTMDEVVKVLIPLQDLNDLAILAYHSRLSQQGRRKKKSDGLHQLTYTQSRNIRTSPLNVGVHRRR 435
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3613163 3619585 - CePI673135_11g003330.1 Cec11g0333 215545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g0333 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec11g0333 435 FunFam Serine/threonine-protein kinase BIK1 73 186 - -
Cec11g0333 435 CDD STKc_IRAK 107 383 - -
Cec11g0333 435 Gene3D Transferase(Phosphotransferase) domain 1 187 395 - -
Cec11g0333 435 PANTHER OS01G0588500 PROTEIN-RELATED 80 384 IPR050823 -
Cec11g0333 435 Pfam Protein tyrosine and serine/threonine kinase 105 380 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec11g0333 435 FunFam Probable serine/threonine-protein kinase PBL8 187 400 - -
Cec11g0333 435 ProSitePatterns Protein kinases ATP-binding region signature. 107 139 IPR017441 GO:0005524(InterPro)
Cec11g0333 435 SUPERFAMILY Protein kinase-like (PK-like) 84 383 IPR011009 -
Cec11g0333 435 Gene3D Phosphorylase Kinase; domain 1 75 186 - -
Cec11g0333 435 ProSiteProfiles Protein kinase domain profile. 101 398 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec09g1949 Cec-Chr9:36510395 Cec11g0333 Cec-Chr11:3613163 1.40E-141 dispersed
Cec09g2076 Cec-Chr9:37779809 Cec11g0333 Cec-Chr11:3613163 5.70E-120 dispersed
Cec09g2077 Cec-Chr9:37790244 Cec11g0333 Cec-Chr11:3613163 1.20E-102 dispersed
Cec10g0024 Cec-Chr10:308221 Cec11g0333 Cec-Chr11:3613163 4.00E-97 dispersed
Cec10g0212 Cec-Chr10:2304125 Cec11g0333 Cec-Chr11:3613163 9.40E-83 dispersed
Cec10g1848 Cec-Chr10:33386538 Cec11g0333 Cec-Chr11:3613163 3.80E-62 dispersed
Cec10g2276 Cec-Chr10:36967826 Cec11g0333 Cec-Chr11:3613163 5.20E-55 dispersed
Cec10g2292 Cec-Chr10:37080301 Cec11g0333 Cec-Chr11:3613163 1.00E-100 dispersed
Cec11g0333 Cec-Chr11:3613163 Cec11g1169 Cec-Chr11:23979325 2.10E-107 dispersed
Cec11g0333 Cec-Chr11:3613163 Cec06g1311 Cec-Chr6:26359186 3.40E-195 wgd
Cec11g0333 Cec-Chr11:3613163 Cec08g1399 Cec-Chr8:25803059 8.80E-61 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72384 PF07714 PK_Tyr_Ser-Thr 6.80E-49 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g0333 - - - 0.0