Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g0360 ATGTTCACCATGACTGTGGAGGTTGGAAGGGCTAATTTGGTGGGTGAAAATGAGGATATGGATCAATTTCCTATTGGTATGCGTATTCTTGCTGTGGATGATGACCCCATTTGCCTTAAGGTTTTGGAGAATTTGCTTCGTAAATGCCAATATCATGTTACAACAACCAATCAGGCGGTTCAGGCACTTACAATGTTGAGGGAGAACAAAAACAGGTTTGACCTGGTTATCAGCGATGTTAACATGCCAGACATGGATGGTTTTAAGCTCCTTGAGCTAGTAGGCCTTGAAATGGACCTACCTGTTATCATGTTGTCTGCGCATAGCAATACCGAACTTGTAAAGAAGGGAGTTATTCATGGGGCGTGTGATTATTTGCTGAAACCTGTTCGAATTGAAGAATTGAAGAATATATGGCAACATGTCCTTCGGAGAAAGAAGCCTTCTGCTAAGAACCAAAATAAGTGCACTAATGGAAATAACACGAGTCAAAGTGTTGAAGGTGCAAAAGGTTTTCCACCTGCAATCAGTACTGATAATGAGAAACCTGGTAAAAGGCAAAAAGACCAGGACGACGACGAGGAAGGAGGTGAAGAAGACAGTACTTATGAGAATGATGAATCCTCAACCCAAAAAAAGCCAAGGGTAAATTGGTATGACGGAGATGAAAATTTGCACAGGAAGTTTGTGGCAGCTGTTAACTTTTTGGGCTATGAAAAGGCTGTTCCTAAGAAGATACTTGATCTGATGAATGTTGAAGGACTTACAAGAGAAAATGTGGCCAGCCATCTTCAGAAATACAGACAATACCTTAAAAAACTGTGTAGTGAGGAAGCTCAGCAATGTAACATGATGGGTGCATTTGGAGGTAAACAAACCTCCTTCAGGCCCATGGCTTCACTCAATGGATTTTCAATGACTGGAACAGGAAGGCTCTCAAATGCTACATTCTCGCCGTATGCCTCTCGAGAAATAGTTGGTCAATTAAACTCTACTTCTGGATTGAGTTTACATGGAATTGCTTCCTCTGGAATGTTCCAGTCCCATAAATTGAGTAGCTCATTAAATACCGTTGGGAAATCCCATCCAGCTTTCTTGCTTGCCAACCAACCTCCGCACACATTCAATGGTATTTCAACGTCATCGGATCACATCCAGTTGCATCGGGATAAATGCACTCTGTCATTCAAAGAGTCTAATTCGATAAATGATGCCTCAAGTTTTACAGTTTCCACCAGCTTCCCTGATGCTAGAATGGCTGTTGGTAGCTCAAGCAATTATGATTTCAGTTCGAGCCATTTGTTGATGTTACGAGGACAGAAGCAACAGATTCAAGGTGGTGGAGAATTTGGAGGTCAGTCTTCTCTTAAGGTAACTCTAGACAACCCAGAACCGTTAGCAAACGGCACAGGTGTTTCTAATATTTTGGGCCATGGTGAGTCTAACAAAAACTGGCCAGGATCAATCCAGCTACCCAAGTTTTCATCTAATGTCTCAGTCACTGGAATTTACCCTCCTGCTGGAATGCCTGCTACTTATTTGACAATTTCCTCGGCTCAGCCTGATAACGACAACTTTCCTGTTGGTTTTCCTTCAACAAGTGTGGATTCAAGTTCTCAGCTTGATTTAAGAGGGGACACACAATGCTATGAAGAACTAATTGGTAGTGTTGTTGAAGCCATGAATGGAAGATCAAAACAACAATGGGATGCAGCTAAACAGGATTATTATGGCCACCATAGTTCCATTGTGAGAGACTCTCTAGTTTCTGGGAATAGTGTTGTAAATCCCTTGAACCAGATTGCAAATCAGAACAATGCAATCTGTCTAGAAAACATTGGAAGCTCTTCGACTAACCAATTGAATGATGGTGCTCCACCCTTCATTCACGATGGTGCGGAAATATCTGCAATGGACACTTGGATGAACTACGATGGAAAAATTCTCATGGATCAAACAAAGCTACAAAGTGGATTTGCAAATTCTAGTTTTAATTCCTTGGATGAATTGGTTAATGCTCTGTCGAAACAGGATCAAGATCAATCCATTCAAATAAATGACGAATTTGGATTTGATGCCCAATCTCTCGGGTCGTCGTTTCCATTTGGATTAATAAAGAGCAGACAGCAAGCTGAAAACTCCCAATATGCAAAAGTGGTAACATCAGATTTTACTAACATCACTTACACAAGGGAATCAACCTGGTGCTAA 2211 41.34 MFTMTVEVGRANLVGENEDMDQFPIGMRILAVDDDPICLKVLENLLRKCQYHVTTTNQAVQALTMLRENKNRFDLVISDVNMPDMDGFKLLELVGLEMDLPVIMLSAHSNTELVKKGVIHGACDYLLKPVRIEELKNIWQHVLRRKKPSAKNQNKCTNGNNTSQSVEGAKGFPPAISTDNEKPGKRQKDQDDDEEGGEEDSTYENDESSTQKKPRVNWYDGDENLHRKFVAAVNFLGYEKAVPKKILDLMNVEGLTRENVASHLQKYRQYLKKLCSEEAQQCNMMGAFGGKQTSFRPMASLNGFSMTGTGRLSNATFSPYASREIVGQLNSTSGLSLHGIASSGMFQSHKLSSSLNTVGKSHPAFLLANQPPHTFNGISTSSDHIQLHRDKCTLSFKESNSINDASSFTVSTSFPDARMAVGSSSNYDFSSSHLLMLRGQKQQIQGGGEFGGQSSLKVTLDNPEPLANGTGVSNILGHGESNKNWPGSIQLPKFSSNVSVTGIYPPAGMPATYLTISSAQPDNDNFPVGFPSTSVDSSSQLDLRGDTQCYEELIGSVVEAMNGRSKQQWDAAKQDYYGHHSSIVRDSLVSGNSVVNPLNQIANQNNAICLENIGSSSTNQLNDGAPPFIHDGAEISAMDTWMNYDGKILMDQTKLQSGFANSSFNSLDELVNALSKQDQDQSIQINDEFGFDAQSLGSSFPFGLIKSRQQAENSQYAKVVTSDFTNITYTRESTWC 736
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3814227 3819052 - CePI673135_11g003600.1 Cec11g0360 215572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g0360 736 PIRSF RR_ARR_type-B 4 699 IPR017053 GO:0003677(InterPro)|GO:0003700(InterPro)|GO:0009736(InterPro)
Cec11g0360 736 Pfam Response regulator receiver domain 29 137 IPR001789 GO:0000160(InterPro)
Cec11g0360 736 SMART REC_2 27 139 IPR001789 GO:0000160(InterPro)
Cec11g0360 736 Gene3D - 209 275 - -
Cec11g0360 736 MobiDBLite consensus disorder prediction 152 168 - -
Cec11g0360 736 FunFam Two-component response regulator 209 275 - -
Cec11g0360 736 SUPERFAMILY Homeodomain-like 211 273 IPR009057 -
Cec11g0360 736 Gene3D - 27 179 - -
Cec11g0360 736 NCBIfam myb-like DNA-binding domain, SHAQKYF class 213 269 IPR006447 GO:0003677(InterPro)
Cec11g0360 736 CDD REC_typeB_ARR-like 29 143 - -
Cec11g0360 736 PANTHER TWO-COMPONENT RESPONSE REGULATOR 22 353 IPR045279 GO:0009736(InterPro)
Cec11g0360 736 MobiDBLite consensus disorder prediction 144 218 - -
Cec11g0360 736 SUPERFAMILY CheY-like 26 152 IPR011006 -
Cec11g0360 736 ProSiteProfiles Response regulatory domain profile. 28 143 IPR001789 GO:0000160(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g1819 Cec-Chr5:30140620 Cec11g0360 Cec-Chr11:3814227 3.40E-110 dispersed
Cec06g1525 Cec-Chr6:28756254 Cec11g0360 Cec-Chr11:3814227 2.60E-45 dispersed
Cec06g1527 Cec-Chr6:28775239 Cec11g0360 Cec-Chr11:3814227 5.60E-49 dispersed
Cec08g1802 Cec-Chr8:29056137 Cec11g0360 Cec-Chr11:3814227 4.50E-65 dispersed
Cec09g0535 Cec-Chr9:4604092 Cec11g0360 Cec-Chr11:3814227 3.00E-17 dispersed
Cec09g1251 Cec-Chr9:14030968 Cec11g0360 Cec-Chr11:3814227 2.70E-17 dispersed
Cec10g0196 Cec-Chr10:2069298 Cec11g0360 Cec-Chr11:3814227 1.10E-18 dispersed
Cec10g1667 Cec-Chr10:31143451 Cec11g0360 Cec-Chr11:3814227 1.60E-15 dispersed
Cec11g0360 Cec-Chr11:3814227 Cec06g1400 Cec-Chr6:27465332 1.10E-156 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30500 PF00072 Response_reg 3.50E-25 CL0304 Cec TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g0360 K14491 - csv:101203718 1186.79