Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g0369 ATGGCTGATATTTCATTGGAAGATGTTAGAAATGAGAATGTTGACCTGGAGAGGATTCCAATTGAGGAGGTATTTGAGCAACTGAAATGCAACAGAAATGGTTTGTCATCTGAGGAAGGAGAAAAGAGACTTCAAATCTTTGGCCCTAACAAACTTGAAGAGAAAAAAGAGAGCAAATTCCTCAAGTTTTTGGGGTTCATGTGGAACCCCCTCTCATGGGTCATGGAATCTGCTGCTATCATGGCTATTGTCTTGGCCAATGGAGGGGGAAAGCCTCCGGACTGGCAAGATTTTGTTGGAATAGTGGTGTTGCTCATTATCAACTCTACCATCAGTTTTATTGAAGAGAACAATGCAGGTAATGCAGCTGCTGCTCTAATGGCAGGACTTGCTCCAAAAACCAAGGTTTTGAGAGATGGAAAATGGAGTGAGGAAGAGGCAGCTATTTTAGTACCAGGAGATTTAATCAGTATCAAGTTGGGAGATATTGTCCCTGCTGATGCAAGACTCTTGGAAGGCGATCCTCTTAAGATCGATCAATCTGCTCTCACTGGCGAATCCTTACCGGTTACCAAGAACCGGGGCGATGAGGTTTTCTCTGGCTCGACTTGTAAACAAGGAGAAATTGAGGCTATTGTTATTGCCACTGGTGTCCACACCTTCTTTGGTAAGGCAGCTCATCTTGTTGATAGCACTAACCAAGTTGGTCATTTCCAAAAGGTGTTGACAGCCATTGGTAACTTCTGCATTTGCTCCATTGCTCTAGGAATGCTCATTGAAATCATAGTGATGTACCCAATCCAAAATAGGGCATACAGAGAGGGCATTGATAACTTGCTGGTTCTTCTCATCGGTGGCATTCCAATTGCCATGCCGACAGTGTTGTCGGTGACCATGGCTATTGGTTCTCACCGTCTAGCGGAGCAAGGTGCTATTACCAAAAGAATGACAGCCATTGAAGAAATGGCAGGAATGGATGTGCTTTGTAGTGACAAGACTGGGACTCTCACCCTCAACAAGCTGACAGTGGACAAGAGTTTGATTGAAGTATTTTCAAAGAATACCGATGCAGACACATTACTTCTGCTGGCTGCAAGAGCTTCAAGAGTTGAGAACCAAGATGCTATCGATGCTTCCATCGTCGGGATGTTGGGTGATCCAAAGGAGGCAAGAGCAGGGATCACTGAGGTACATTTCTTACCTTTCAATCCCGTTGAGAAGCGCACTGCTATCACTTACATTGATAGTAATGGAAACTGGCATCGAAGTAGCAAGGGTGCTCCGGAACAGATAATTGACCTTTGTGACCTCAAAGGGGAGATAAGGAAGAAGGCTCATGATATTATCAGTAATTATGCAGATCATGGTCTTCGTTCTCTAGCCGTCGCTCGTCAGACTGTTCTAGAGAAAACCAAAGAGAGTGCTGGAGAGCCATGGGACTTTGTGGGCTTGTTGCCCCTCTTTGATCCTCCAAGGCATGATAGTGCAGAGACTATTCGTCAAGCACTCGAACTCGGGGTAAATGTTAAGATGATCACTGGAGATCAATTGGCCATTGGAAAAGAGTCCGGTCGTAGGCTCGGTATGGGCACCAATATGTATCCATCATCTTCCTTACTTGGTCAAAGCAAGGATGAATCCATTGCTAGCATACCTGTTGATGAACTTATTGAGAAGGCAGATGGGTTTGCTGGTGTCTTCCCAGAACACAAGTATGAGATAGTGAAAAAGCTCCAAGAGAGGAAACACATTTGTGGGATGACTGGTGACGGTGTTAACGATGCCCCTGCGCTCAAGAAGGCCAACATCGGAATTGCTGTAGCTGATGCAACTGATGCAGCAAGGAGTGCATCAGACATTGTTTTAACAGAACCAGGTCTCAGTGTAATCGTGAGTGCAGTTCTAACAAGTAGGGCCATCTTTCAAAGGATGAAAAACTACACAATCTATGCAGTTTCCATCACAATCCGAATCGTGTTGGGTTTCTTGCTTGTAGCTCTGATATGGAAGTTTGACTTCTCACCTTTCATGGTCTTGATTATTGCCATCTTGAATGATGGAACCATCATGACCATCTCCAAGGATAGAGTGAAGCCATCTCCTATGCCTGATTCATGGAAGCTAAACGAAATTTTCGCCACCGGTGTTGTTCTAGGAACGTACATGGCTATCATGACTGTGAAAACATTTGGGGTGAAGCAAATCAGTGAAAATCTAGCTGAGCTTAACTCTGCTCTTTACCTCCACGTGAGCATCATTAGCCAAGCCCTCATCTTCGTGACGCGATCAAGGAGTTGGTCCTTTGTAGAGCGCCCTGGTGTTTTGCTAGTTGGAGCCTTCCTAATAGCTCAGCTGTTGGCAACCGTCATCGCCGTGTATGCCGAATGGGACTTTGCTAGAATTCATGGCATTGGTTGGGGATGGGCAGGAGTGATCTGGATTTACAGTATCATCACATACCTCCCCCTTGATGTCCTCAAGTTCATCATCCGCTATGCATTGAGTGGGAAGGCCTGGGATAATTTGCTTCAAAACAAGACTGCATTCACAACTAAGAAGGATTATGGAAAAGGAGAAAGGGAGGCACAATGGGCATCAGCACAACGTACACTTCACGGCTTACAGAAACCAGAAGCGCTATTTAACGACACGAGTAGCTACCGAGAGCTTTCCGAGATCGCAGAACAAGCAAAGAGAAGAGCTGAAGTTGCCAGGATGAGTCAGAATGTATGA 2733 45.26 MADISLEDVRNENVDLERIPIEEVFEQLKCNRNGLSSEEGEKRLQIFGPNKLEEKKESKFLKFLGFMWNPLSWVMESAAIMAIVLANGGGKPPDWQDFVGIVVLLIINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEEEAAILVPGDLISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNRGDEVFSGSTCKQGEIEAIVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIALGMLIEIIVMYPIQNRAYREGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLAEQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKSLIEVFSKNTDADTLLLLAARASRVENQDAIDASIVGMLGDPKEARAGITEVHFLPFNPVEKRTAITYIDSNGNWHRSSKGAPEQIIDLCDLKGEIRKKAHDIISNYADHGLRSLAVARQTVLEKTKESAGEPWDFVGLLPLFDPPRHDSAETIRQALELGVNVKMITGDQLAIGKESGRRLGMGTNMYPSSSLLGQSKDESIASIPVDELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKANIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLVALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPMPDSWKLNEIFATGVVLGTYMAIMTVKTFGVKQISENLAELNSALYLHVSIISQALIFVTRSRSWSFVERPGVLLVGAFLIAQLLATVIAVYAEWDFARIHGIGWGWAGVIWIYSIITYLPLDVLKFIIRYALSGKAWDNLLQNKTAFTTKKDYGKGEREAQWASAQRTLHGLQKPEALFNDTSSYRELSEIAEQAKRRAEVARMSQNV 910
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 3877999 3882878 + CePI673135_11g003690.1 Cec11g0369 215581
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cec11g0369 910 SMART Cation_ATPase_N_a_2 15 87 IPR004014 -
Cec11g0369 910 SUPERFAMILY Calcium ATPase, transmembrane domain M 14 834 IPR023298 -
Cec11g0369 910 Gene3D - 132 216 - -
Cec11g0369 910 Gene3D - 885 909 - -
Cec11g0369 910 PRINTS P-type cation-transporting ATPase superfamily signature 611 623 - -
Cec11g0369 910 PRINTS P-type cation-transporting ATPase superfamily signature 483 494 - -
Cec11g0369 910 PRINTS P-type cation-transporting ATPase superfamily signature 505 515 - -
Cec11g0369 910 PRINTS P-type cation-transporting ATPase superfamily signature 329 343 - -
Cec11g0369 910 PRINTS P-type cation-transporting ATPase superfamily signature 588 607 - -
Cec11g0369 910 PRINTS P-type cation-transporting ATPase superfamily signature 179 193 - -
Cec11g0369 910 ProSitePatterns E1-E2 ATPases phosphorylation site. 331 337 IPR018303 -
Cec11g0369 910 NCBIfam plasma-membrane proton-efflux P-type ATPase 34 793 IPR006534 GO:0008553(InterPro)|GO:0016020(InterPro)|GO:0120029(InterPro)
Cec11g0369 910 NCBIfam HAD-IC family P-type ATPase 563 675 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cec11g0369 910 NCBIfam HAD-IC family P-type ATPase 101 359 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cec11g0369 910 PRINTS H+-transporting ATPase (proton pump) signature 560 576 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cec11g0369 910 PRINTS H+-transporting ATPase (proton pump) signature 588 604 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cec11g0369 910 PRINTS H+-transporting ATPase (proton pump) signature 445 463 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cec11g0369 910 PRINTS H+-transporting ATPase (proton pump) signature 619 644 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cec11g0369 910 PRINTS H+-transporting ATPase (proton pump) signature 747 768 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cec11g0369 910 SFLD p-type atpase 311 640 IPR044492 -
Cec11g0369 910 Coils Coil 887 907 - -
Cec11g0369 910 SFLD C1.7: P-type atpase like 311 640 - -
Cec11g0369 910 SUPERFAMILY HAD-like 325 635 IPR036412 -
Cec11g0369 910 Gene3D - 326 625 IPR023214 -
Cec11g0369 910 SUPERFAMILY Calcium ATPase, transduction domain A 132 229 IPR008250 -
Cec11g0369 910 Pfam E1-E2 ATPase 131 308 - -
Cec11g0369 910 FunFam Plasma membrane ATPase 341 488 - -
Cec11g0369 910 Gene3D - 94 802 - -
Cec11g0369 910 CDD P-type_ATPase_H 34 828 IPR006534 GO:0008553(InterPro)|GO:0016020(InterPro)|GO:0120029(InterPro)
Cec11g0369 910 Pfam Cation transporter/ATPase, N-terminus 18 81 IPR004014 -
Cec11g0369 910 Pfam haloacid dehalogenase-like hydrolase 325 602 - -
Cec11g0369 910 PANTHER CALCIUM-TRANSPORTING ATPASE 17 862 - GO:0005886(PANTHER)|GO:0008553(PANTHER)|GO:0015662(PANTHER)|GO:0016021(PANTHER)|GO:0034220(PANTHER)|GO:0051453(PANTHER)|GO:1902600(PANTHER)
Cec11g0369 910 FunFam Plasma membrane ATPase 132 216 - -
Cec11g0369 910 Gene3D - 341 488 IPR023299 GO:0000166(InterPro)
Cec11g0369 910 FunFam Plasma membrane ATPase 480 636 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec11g0369 Cec-Chr11:3877999 Cec11g1193 Cec-Chr11:24541914 2.80E-42 dispersed
Cec11g0369 Cec-Chr11:3877999 Cec11g1242 Cec-Chr11:25962783 0.00E+00 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g0369 K01535 - csv:101211582 1661.35