Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g0426 ATGGCAACTTACTACTCTAGTTCGAATAACGAAAGGGATGCTACTTCCATCCTCTATTCAAGGGGATCTTTGCTCGGTTCGTATGAAGAAACAACAGTTCTTCCACGGAATATGATGATGCATGTAAATTCTGGGACATACATGGATACATTGCCTTCGCAGGCGCAAAATGGTTGTGGTCAGATAACGTCCGTTGGAGCAGCGGGAACTACCCAACAGCAGCAAGAGTTTTTATTGAATCTTGGTGGTTCGCAAATTGCTGAGCATGATTTCAATACATGGAGAGAGAACCGGAGTGAAATGCTTGGCACGAACTCGATGCGTGGCCCTACCAATGTTCTTCATGGTGGGCATAATTTGCAGGGTCAGGGGTTATCCCTTACTCTCAGTACACAAATCCCATCTGCAATCCAAATCCCTTCAATCCCCTACAGAAATTCGGATATGGGTTTAACTTCATTCCTGAGTCCTAATCCGACTAATTCAGGCGAGGATGGCTGCAGAAATGGCGCTTCTAGAGACGAACAGATGAGAAATGGAGAAAACTTGCCACCTAATTTTCAAGAATTGGCTAAGGATGAATTATCTCAATACAGCATGTCTAGTATTGCAAGAACTATACCCAATTCAAAGTACCTCAAGGCAGCTCAACAACTGCTTGATGAAGTTGTTAATGTCAGGAAAGCTTTGAAGCGACCTAATAACGAGAGAAACCAGAGTTCACATGAGCATGAAACTAGAAGTGCAAAGAATGGTGATGCAGGAACCAAAAATGACAGTTCGATGCTCACTGCGAGTGGAGCATCTTCAAACCCTCAAGAAACTGGGAGCAATTCAACATGTGAGCTCTCACATGCCGAAAAGCAAGATTTGCAGAACAAGTTGACAAAGCTTTTGTACATGTTGGATGAGGTTGATAGAAGGTACAATCAGTATTATCATCAGATGCAGATTGTGGTGTCATCATTTGATGTGATAGCTGGATGTGGGGCATCTAAACCATATACTGCACTTGCTCTCCAGACTATATCCCGTCATTTTCGGTGCTTGCGGGATGCAATAGCTGGTCAAGTCAGAGCTACCCGTAAAAGCCTAGGAGAGCATGAAAATTCTGGAAATGACAAAGGAGTTGGAATCACTCGTCTCCGATATGTGGACCAGCAGTTAAGGCAACAGAGGGCTCTTCAGCAGCTTGGTATGATTCAGCAGCATGCTTGGAGGCCTCAAAGAGGGTTGCCTGAGAACTCTGTTTCAATTCTCCGTGCTTGGCTGTTCGAGCATTTCCTTCATCCGTATCCAAAGGATTCTGATAAGATCATGCTGGCACGGCAGACAGGATTGACTAGAAGTCAGGTCTCTAATTGGTTTATCAATGCGCGTGTACGTCTTTGGAAACCTATGGTAGAGGAGATGTACAAGGAAGAAATAGGAAGTGTAGACATGGACTCTATATCATCATCTGAAAATGCTGTCAAGGCAACAAAAGGAGATAACAAGACCTTTGAGGATGATAAAGAGGAGGATCTGCAACAAAGTGCAAGCTCAACAGCCACCGAAAGATGTAGTGCTGGAGACATTATCGACTTAAAATCTGATCAAGTCTCTAATCTCGGAAATTCTAGTTCCAACAGACTAGCTAGTTTCCAAAATGGTGCTCACATTGAAGCCCGAAATGAGCTGGTGAAACCGAGTGAGGAGTTAAGGCCTAATGTAAATAACTCTAGTTTCTTTCCTGATGCAATTGTCCACTCTCAGGGTGAGAGTGACAGGTTTATGGCTGCCGCTGCTGCCTATCACATGTCTGAATTGGGAAGGTTTGGGACGGTTGGCGGGGTATCGCTTACGCTGGGTTTGCAGCATTGTGAGGGTGGTGGCATGCCTATGCCTGCTGGGACACATCATGGTTTTGCAGCCATGAGAGGAGACGATATGTACAATGCCGCAGCGTCTTCTCTCGGGGAAACGGTGCATTTTGAATGCGTAAATAGTGGGAATCCGCAACCAAGGTTTGGCCCTTCCCATCTTTATCATGATTTTGTTGTGTAA 2046 44.82 MATYYSSSNNERDATSILYSRGSLLGSYEETTVLPRNMMMHVNSGTYMDTLPSQAQNGCGQITSVGAAGTTQQQQEFLLNLGGSQIAEHDFNTWRENRSEMLGTNSMRGPTNVLHGGHNLQGQGLSLTLSTQIPSAIQIPSIPYRNSDMGLTSFLSPNPTNSGEDGCRNGASRDEQMRNGENLPPNFQELAKDELSQYSMSSIARTIPNSKYLKAAQQLLDEVVNVRKALKRPNNERNQSSHEHETRSAKNGDAGTKNDSSMLTASGASSNPQETGSNSTCELSHAEKQDLQNKLTKLLYMLDEVDRRYNQYYHQMQIVVSSFDVIAGCGASKPYTALALQTISRHFRCLRDAIAGQVRATRKSLGEHENSGNDKGVGITRLRYVDQQLRQQRALQQLGMIQQHAWRPQRGLPENSVSILRAWLFEHFLHPYPKDSDKIMLARQTGLTRSQVSNWFINARVRLWKPMVEEMYKEEIGSVDMDSISSSENAVKATKGDNKTFEDDKEEDLQQSASSTATERCSAGDIIDLKSDQVSNLGNSSSNRLASFQNGAHIEARNELVKPSEELRPNVNNSSFFPDAIVHSQGESDRFMAAAAAYHMSELGRFGTVGGVSLTLGLQHCEGGGMPMPAGTHHGFAAMRGDDMYNAAASSLGETVHFECVNSGNPQPRFGPSHLYHDFVV 681
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4464511 4467635 + CePI673135_11g004260.1 Cec11g0426 215638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g0426 681 SUPERFAMILY Homeodomain-like 407 474 IPR009057 -
Cec11g0426 681 Pfam Associated with HOX 207 355 IPR006563 -
Cec11g0426 681 FunFam BEL1-like homeodomain protein 4 409 471 - -
Cec11g0426 681 ProSiteProfiles 'Homeobox' domain profile. 403 466 IPR001356 GO:0003677(InterPro)
Cec11g0426 681 Gene3D - 401 479 - -
Cec11g0426 681 SMART HOX_1 406 470 IPR001356 GO:0003677(InterPro)
Cec11g0426 681 SMART prehox3 201 356 IPR006563 -
Cec11g0426 681 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 164 503 IPR050224 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0006357(PANTHER)
Cec11g0426 681 MobiDBLite consensus disorder prediction 231 285 - -
Cec11g0426 681 MobiDBLite consensus disorder prediction 152 167 - -
Cec11g0426 681 Coils Coil 288 308 - -
Cec11g0426 681 MobiDBLite consensus disorder prediction 253 285 - -
Cec11g0426 681 CDD homeodomain 406 467 IPR001356 GO:0003677(InterPro)
Cec11g0426 681 MobiDBLite consensus disorder prediction 231 252 - -
Cec11g0426 681 Pfam Homeobox KN domain 423 462 IPR008422 GO:0003677(InterPro)|GO:0006355(InterPro)
Cec11g0426 681 MobiDBLite consensus disorder prediction 486 520 - -
Cec11g0426 681 MobiDBLite consensus disorder prediction 495 510 - -
Cec11g0426 681 MobiDBLite consensus disorder prediction 152 186 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g2357 Cec-Chr2:40804767 Cec11g0426 Cec-Chr11:4464511 3.20E-78 dispersed
Cec04g1314 Cec-Chr4:32760880 Cec11g0426 Cec-Chr11:4464511 9.10E-73 dispersed
Cec08g1758 Cec-Chr8:28693340 Cec11g0426 Cec-Chr11:4464511 5.00E-38 dispersed
Cec09g0274 Cec-Chr9:2382466 Cec11g0426 Cec-Chr11:4464511 1.80E-86 dispersed
Cec10g2156 Cec-Chr10:36069655 Cec11g0426 Cec-Chr11:4464511 4.80E-49 dispersed
Cec11g0426 Cec-Chr11:4464511 Cec10g1845 Cec-Chr10:33299423 1.30E-84 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30503 PF07526 POX 1.80E-51 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g0426 - - - 0.0