Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g0450 ATGCCAACAAATTTCCTAGTTTTGATAGATACAAAGACCATTTTCCTGGTTTTAGATTGTTTGGTAAAACAACCACTTACCGGCCGTGGAGAAAACGAAACAGCAACTCCAAATTCCAAACCCTCAGATTGTTCTTCGTCGCCGGTGGAAGCTGCTACATTTCTCCGATTCAACTCGAAAATGGAGGAGAAAAGCAAGATTCTGATCATTGGAGCAACAGGTTACCTAGGGTTTCATTTGGCTCAAGCCAGCTGCAATTCTTCTCACCCTACATTTGCTCTCATCAGAGATTCTACTTTCTCTTCACCTCACAAACTAGACAAGCTCCGAGCTCTTTCCGATGCCGGAGTTAAATTCCTCAAGGGTTCTCTAGAAGACGAAGCTAGCCTTGTGGAAGCTATTAATCAAGTGGATGTGGTCATTTGTGCTGTTTCCTCTAAACAGGTGTCGGAACAGAAGCCTCTGATTCGAATCATAAAACAAACTGGATCCATTAAGAGGTTTATTCCATCGGAATTTGGACTTGATCCGGATAAGGTTCAAATATTAAATATGGATTACGACTTCTATTCCCGCAAAGCTGAAATTCGTCGGCTAACTGAAGCTGAAGGCATTCCATATACCATAGTTTCTTGCAATTTTTTTACAAGTTATTTACTTCCTTCCCTTGTACAACCAGGCATGAAAAGCCCTCCAAGGGATAAGGTGACAATATTTGGTGATGGAAATACCAAAGGTGTATTTGTGAAGGTCAATGATGTTGCTGCCTTAACAATTAGTGCAGTGGATGATCCACGCACATTGAACAAGGTAGTTTATTTAAGGCCCGAAGGAAATGTTTATTCCTTGAATGAACTGGTTGAGATTTGGGAGAGCAAAATTGGGAAGAAGCTTGAGAAGAATTATGTATCAGAAGAGGAGCTGCTAAAGAAAATTAAAGAGACTCCTTATCCTGACAACATGGCTTTCATTTTCATATATTCTGCATTTATAAAGGGAGATCAAACATACTTCGATATTGAGGCGGCATCAAATGGCGTTGATGGTTCAAAATTATATCCACAACTCAAGCATACCACGATTACGTTTTCTTCTTTCTTTCTGCAGCTCGACGGTAGTCCTCCGATCAGCCATTTCTTCACCGGAAACCTTACTCCAATGGCTCAGAATCTCAAGATTCTTATCATCGGAGGAACTGGCTACATCGGAAAATTCATAGTACAAGCCAGCGCCAAAGCCGGTCATCCTACCTATGCATTGATCCGCAAGTCTTCGCTCGCAAGCCCCGCCAAGTATCGAATCATCAATCATTTCAAAAGCTTAGGGGTCAATTTTCTCTTCGGCGATCTCTTTGACAATGAAAGTTTGGTTAAGGCGATTAAGCAGGTTGATGTGGTGATATCAACCCTCGGTGGTCATATGGTTCCCCATCAACATAAGATCCTATCAGCTATCAAACAAGCTGGCAATGTGAAGAGATTCTTTCCTTCCGAGTTCGGCAACGATGCAGATCATATCGATGCAGTGGAGCCAGCGAAATCAATGTATGCTGCAAAGGCTGAATTTCGTAGAGCTGTTGAGGCTGAGGGAATCCCACATACATTTGTCGTATGCAATTTCTTCGACGGTTACTTTCTAAGCAACTTGTCTCAGCCAGATGCAAGCGTCCCACCTAGAGACAAAGTCATAATCTTAGGGGATGGAACTCCCAAAGTGATTTACAACAAGGAAGAAGACGTTGGGACGTACACAATCCGAGCGATCGACGATCCAAGGACCCTCAACAAGATCATGTACCTTAGACCCCCAGCCAACATCTACTCAACCAATGATCTCGTCTCGCTGTGGGAGAGAAAAATTGGGAAGAGTCTTAAAAGGATCTACGTCCCAGAGGAGGAAGTGTTGAAGAACATCAAAGAGACTTCATATCCACTTAATATAGAATTGGCACTCTGTCACACTGCTCAAGTGAAAGGATCTCAAACTAATTTTGATATTGAGCCATCTTTTGGAGTGGAAGCTTCAGCTTTGTACCCAGATGTTCGATATACAACTGTGGAAGAATACCTCGACCAGTTTGTCTGA 2085 42.49 MPTNFLVLIDTKTIFLVLDCLVKQPLTGRGENETATPNSKPSDCSSSPVEAATFLRFNSKMEEKSKILIIGATGYLGFHLAQASCNSSHPTFALIRDSTFSSPHKLDKLRALSDAGVKFLKGSLEDEASLVEAINQVDVVICAVSSKQVSEQKPLIRIIKQTGSIKRFIPSEFGLDPDKVQILNMDYDFYSRKAEIRRLTEAEGIPYTIVSCNFFTSYLLPSLVQPGMKSPPRDKVTIFGDGNTKGVFVKVNDVAALTISAVDDPRTLNKVVYLRPEGNVYSLNELVEIWESKIGKKLEKNYVSEEELLKKIKETPYPDNMAFIFIYSAFIKGDQTYFDIEAASNGVDGSKLYPQLKHTTITFSSFFLQLDGSPPISHFFTGNLTPMAQNLKILIIGGTGYIGKFIVQASAKAGHPTYALIRKSSLASPAKYRIINHFKSLGVNFLFGDLFDNESLVKAIKQVDVVISTLGGHMVPHQHKILSAIKQAGNVKRFFPSEFGNDADHIDAVEPAKSMYAAKAEFRRAVEAEGIPHTFVVCNFFDGYFLSNLSQPDASVPPRDKVIILGDGTPKVIYNKEEDVGTYTIRAIDDPRTLNKIMYLRPPANIYSTNDLVSLWERKIGKSLKRIYVPEEEVLKNIKETSYPLNIELALCHTAQVKGSQTNFDIEPSFGVEASALYPDVRYTTVEEYLDQFV 694
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4755855 4763115 - CePI673135_11g004500.1 Cec11g0450 215662

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g0450 694 Coils Coil 295 315 - -
Cec11g0450 694 Gene3D - 540 690 - -
Cec11g0450 694 Gene3D - 212 361 - -
Cec11g0450 694 PANTHER PINORESINOL REDUCTASE-RELATED 392 694 IPR050608 -
Cec11g0450 694 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 63 337 IPR036291 -
Cec11g0450 694 Gene3D - 392 680 - -
Cec11g0450 694 CDD PCBER_SDR_a 66 349 IPR045312 GO:0016491(InterPro)
Cec11g0450 694 CDD PCBER_SDR_a 392 689 IPR045312 GO:0016491(InterPro)
Cec11g0450 694 Pfam NmrA-like family 393 624 IPR008030 -
Cec11g0450 694 Pfam NmrA-like family 67 298 IPR008030 -
Cec11g0450 694 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 392 653 IPR036291 -
Cec11g0450 694 Gene3D - 66 353 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g0450 K23050 - - csv:101209800 591.267
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec10g0546 Cec-Chr10:6627951 Cec11g0450 Cec-Chr11:4755855 1.30E-119 dispersed
Cec11g0449 Cec-Chr11:4737084 Cec11g0450 Cec-Chr11:4755855 3.40E-134 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g963 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Blo17g00792 . . . . . . Bma05g00127 . . . . . . . . . . . . . . . . Cla11g00408 Cam11g0454 Cec11g0450 Cco11g0441 Clacu11g0579 Cmu11g0437 Cre11g0918 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000111 5 10 6 7 3 10 5 11 9 7 10 9 5 7 11 5 9 5 6 10 8 9 7 8 12 9 8 7 9 7 234