Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g0464 ATGTCTTCTTCATCCGATCCTCCTTCCCCTTCTGCTTCTGATTCTGATCCCTCTAATCCCCCTCCTTCTCCACCTCCTTCCACTGCGCCGCCTCCCGATGCTTCTCCGCCTCCCCCGGATTCCTCCTCCTCCTCTCCTCCTCCGCCGGATTCTTCTCCTCCTCCTCCACCCGATGCTTCTTCTCCACCTCCGCCAGATGCATCCCCGCCGCCGCCTAACGACTCCTCCCCGCCTCCTGGTGATTCCTCTTCTTCACCGCCACCGCCGAAGGATTCCAACTCTAATTCCCCTCCGTCGCCGCCGCCTCCTCCACCACCACCGCCGCCGCCTCCTCCGCCGCGTGGATCCTCAAAGCATTCTCCTCCGCCTCCGAGATCGATCGACTCAGGATCCTCAGACTCCTCGTCCGGCGGTTCCGCTCCCCAGGCGGTGCCGATCATTGTAGGAGTGGCGGTGGCGGCAGGATTTTTGCTTTTCGCCATGGCCTTGATATTCTTCGCTTGCACCCGAAAGAAAAAGAAGCAAAATAGTAATTCCATGTATTTCGATGAACAGTCCGGTCCGAAAGGTGGGGATCCATATTACAACGGAAGGAATCACAACTGGAACAACCCGAGCGAACATTTCGTGAACATGGCGCCAATCAGCGGCGGAACCCAAGGAGGAGGGTGGCCATCGCCACCGCCGCCGCCGCCTCCTCCACCGGGATTATTGAGCAGTGATATGAGCTCGAATTTCTCAGGGCCACAAGGGCCACCGTTGCCGCCGCCGCACCCATCGGTGGCTCTGGGGTTCAATAAGAGCACTTTCACGTACGACGAGCTAATGGCGGCAACCTCGGGATTCTCTCCGGCGAATCTGTTGGGGCAAGGAGGATTCGGGTATGTTCATAAAGGACTACTGCCCAACGGCAAGGAAATTGCAGTGAAAAGCCTGAAAACGGGAAGCGGGCAAGGAGATCGAGAATTTGCGGCCGAGGTGGAGATCATCAGCCGCGTTCACCACCGCCATTTGGTGTCCCTTGTCGGGTATTGTATCGCCGGTGACCGGAAGATGTTGGTTTACGAATTTGTCCCTAATAACAACCTCGAATTCCACCTTCACGGCAAGGGGCGGCCACCATTGGACTGGTCGACGAGAATGAAGATCGCATTGGGCTCAGCCAAGGGCCTAGCCTATCTCCACGAAGACTGCCATCCTCGCATTATCCATAGAGATATCAAGACTGCCAATATTCTTATAGACATGAGTTTCGAGGCTAAGGTGGCTGATTTTGGATTGGCGAAGCTCAACCAAGACAATTACACTCATGTATCGACTCGCGTCATGGGCACATTTGGATATTTAGCTCCGGAGTATGCATCAAGTGGGAAGCTAACGGAGAAATCAGATATATTCTCATTTGGAGTAATGCTTTTGGAGCTGATTACCGGAAGACGACCGGTGGACACGGCCGGGGAAATGGAAGACAGCTTAGTGGACTGGTCAAGGCCTCTTTGTGTGAAAGCAATGAGTGATGGAAACTATGATGAGTTGGCTGATTCACGGTTACAGAAGAACTATGATGTCCAAGAAATGGCTTGCATGGTGGCTTGCGCCGCCGCTTGCATTCGCCATTCGGCTCGGCGCCGTCCCAAAATGAGCCAGGTGGTACGAGCATTGGAAGGCGATGTGTCGCTGGATGACTTGAACGATGGAGTAAAGCCAGGGCAAAGCTCATACTTCGGGTCCGGCACGTCCTCGGAGTACGACGCAAGCTCCTATAGTGCCGACATGAAGAGGTTCCGAAAGGTGGCGTTGGACAGCCGCGAGTACGCAAGCAGCGATTATGGCGGCACTAGCGAGTACGGCCTAAACCCTTCCTCAACAAGCAGCGAAATGAGTCGGAAGCCTAGTCGTTTATCCTCCCCCGATGCACCCCCCTCACATTCTTAA 1935 55.09 MSSSSDPPSPSASDSDPSNPPPSPPPSTAPPPDASPPPPDSSSSSPPPPDSSPPPPPDASSPPPPDASPPPPNDSSPPPGDSSSSPPPPKDSNSNSPPSPPPPPPPPPPPPPPRGSSKHSPPPPRSIDSGSSDSSSGGSAPQAVPIIVGVAVAAGFLLFAMALIFFACTRKKKKQNSNSMYFDEQSGPKGGDPYYNGRNHNWNNPSEHFVNMAPISGGTQGGGWPSPPPPPPPPPGLLSSDMSSNFSGPQGPPLPPPHPSVALGFNKSTFTYDELMAATSGFSPANLLGQGGFGYVHKGLLPNGKEIAVKSLKTGSGQGDREFAAEVEIISRVHHRHLVSLVGYCIAGDRKMLVYEFVPNNNLEFHLHGKGRPPLDWSTRMKIALGSAKGLAYLHEDCHPRIIHRDIKTANILIDMSFEAKVADFGLAKLNQDNYTHVSTRVMGTFGYLAPEYASSGKLTEKSDIFSFGVMLLELITGRRPVDTAGEMEDSLVDWSRPLCVKAMSDGNYDELADSRLQKNYDVQEMACMVACAAACIRHSARRRPKMSQVVRALEGDVSLDDLNDGVKPGQSSYFGSGTSSEYDASSYSADMKRFRKVALDSREYASSDYGGTSEYGLNPSSTSSEMSRKPSRLSSPDAPPSHS 644
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4945963 4951795 - CePI673135_11g004640.1 Cec11g0464 215676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g0464 644 FunFam proline-rich receptor-like protein kinase PERK1 260 357 - -
Cec11g0464 644 MobiDBLite consensus disorder prediction 223 238 - -
Cec11g0464 644 MobiDBLite consensus disorder prediction 174 260 - -
Cec11g0464 644 MobiDBLite consensus disorder prediction 122 141 - -
Cec11g0464 644 SMART serkin_6 282 554 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g0464 644 Gene3D Transferase(Phosphotransferase) domain 1 358 565 - -
Cec11g0464 644 Gene3D Phosphorylase Kinase; domain 1 259 357 - -
Cec11g0464 644 FunFam Proline-rich receptor-like protein kinase PERK1 358 565 - -
Cec11g0464 644 MobiDBLite consensus disorder prediction 1 141 - -
Cec11g0464 644 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 115 598 IPR047117 -
Cec11g0464 644 ProSiteProfiles Protein kinase domain profile. 282 560 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g0464 644 MobiDBLite consensus disorder prediction 562 586 - -
Cec11g0464 644 MobiDBLite consensus disorder prediction 570 586 - -
Cec11g0464 644 ProSitePatterns Serine/Threonine protein kinases active-site signature. 402 414 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec11g0464 644 MobiDBLite consensus disorder prediction 13 120 - -
Cec11g0464 644 Pfam Protein tyrosine and serine/threonine kinase 287 554 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec11g0464 644 SUPERFAMILY Protein kinase-like (PK-like) 257 554 IPR011009 -
Cec11g0464 644 MobiDBLite consensus disorder prediction 607 644 - -
Cec11g0464 644 ProSitePatterns Protein kinases ATP-binding region signature. 288 310 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g0928 Cec-Chr6:12711115 Cec11g0464 Cec-Chr11:4945963 8.30E-158 dispersed
Cec11g0254 Cec-Chr11:2691823 Cec11g0464 Cec-Chr11:4945963 1.30E-161 dispersed
Cec11g0464 Cec-Chr11:4945963 Cec11g0552 Cec-Chr11:6039190 7.50E-122 dispersed
Cec05g2793 Cec-Chr5:38279677 Cec11g0464 Cec-Chr11:4945963 4.30E-54 transposed
Cec07g1003 Cec-Chr7:24464448 Cec11g0464 Cec-Chr11:4945963 1.00E-163 transposed
Cec01g0796 Cec-Chr1:8786590 Cec11g0464 Cec-Chr11:4945963 2.10E-50 transposed
Cec11g0464 Cec-Chr11:4945963 Cec11g1723 Cec-Chr11:31497152 3.30E-59 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72388 PF07714 PK_Tyr_Ser-Thr 1.50E-46 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g0464 - - - 0.0