Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g0476 ATGGCTAAGAAGGACGATTCTGCAAGGCCTCCACTTCAGCGCCCCACCATTACTCTGCCGCCGCGCCCTTCTATGGAGGCTTTTTTCGCTGGCGGACCCACTGGAGTTAGCCCTGGCCCGATGACTCTTCTCTCCAGTTACTTCGCCGACGGTGCCGTTGACTCCCCCTCCTTCTCCCAGCTTCTCGCCGGAGCTATGGCCTCTCCGATGGCTATGGGGTTTTTCGGAACTGGGTCCACACCCAATTATTACGCCAAGGATGGAACCGCCTCGGAATTGGAATTTGGGATGAAACAATCGAAGCCGCTGAATTTAGTGGTAGCTCGGCCTCCTTTGTTCTCGGTCCCGCCGGGGCTTAGTCCTTCTGGGTTGCTTAATTCGCCTGGGTTTTATCCTCCTCAGAGTCCATTCGGAATGTCACACCAGCAAGCATTGGCTCAGGTTACTGCTCAAGCGGCATTGGCAAATTCTCATATGCATATGCAGCAAGCTGAATATCAACATTCTTCGGTACCAGCTCCTACAGAACCGTTGACACGGGATCCATCATTTTCTCTTGATGAAGCATCTCAACTGGCCATATTACCCTCCACTTCAGACACAAAAAGTCTGATTGCAGAACCGACAGAAGTCTCTCACCCTGACAGAAAATATCAACCTCCTCCTCCTCACGTCTCTGATAAACCTGCAGATGATGGCTATAATTGGCGTAAATATGGACAGAAGTTGGTTAAGGGCAGTGAATATCCCCGAAGCTATTACAAATGCACTCATTTGAATTGCCCTGTAAAAAAGAAGATTGAGCGCTCACCTGATGGTCAAATTACTGAAATTATTTACAAAGGACAGCACAACCACGAACCTCCTCCAGCCAACAAACGTGCAAGAGATAATAGTGAACCGAGTGGATGTACAAATTCTTTGATGAAGCCTGAATGTGGTTTGCAAAATCAAGCTGGAATTTTGAACAAGTCAAGTGAAAATGTGCAATTAGGGTCTAGCGACAGTGAAGAACGAGCTGATACAGAGATAACAGATGACAGAGATGAAGATGAGCCAAATCCAAAGAGGCAGAACATTGACGCAGGGACATCTGGTGTTGCCTTGTCACATAAAACACTCACAGAACCAAAAATCATTGTTCAAACAAGAAGTGAGGTTGACCTGTTAGATGACGGTTATAGGTGGCGCAAGTACGGGCAGAAAGTGGTTAAAGGAAATCCTAACCCTAGGAGCTACTACAAATGCACTAGTGCTGGGTGCAACGTCCGAAAGCATGTTGAGAGATCTTCAACAGACTCGAAAGCTGTTGTTACTACATACGAAGGGAAACATAACCATGATGTTCCTGCAGCTAGAAACAGCAGCCACCACACGGTCAACAATACTGTCCCCCAGATCAAACCACACAAAGTTGTAGCTCAGAAACATCCATTACTTAAAGAGATGGAATATGGAACTAATGACCAGAGACCTGCCGTTTTGCGGCTTAAAGAAGAGCAAATCACCGTTCTGTTTGTATTTGAGTCAAAAGAGCTCCATTTGCCTTATGCCTTCTGCAATTTATATCCCAAAACTGTTTTGAATGATGCTGATGCTAAGGGAGATACAAGGAGATGGGTAGTTGATTTGATACAGTTCCATTGGGAAGATGCTATGCCTACATACATCTCTTCTTATTTGGTTGTGAAAAACAATGAAAAAGATCTCGCAGTCCCAAAGGAGGAAGACAAGGTCATTGGTGGTGCCAACAACTTAACCCAAAAATGGCTCTCATTTCTTATGGCCCATTTCCCGATCGGGGTCGATCGCCCTTTCTTCGCGTCGTTTTCTCTGATCGATGCTGTCGGGATTTGGTGGTTCATGGGTTGCATTAGCTCCAAGCACGTAGCTAAGGCGGCAGCATCACCCGTTAGTAATCATCGCACCAGACCCACCAAACCCACCACCACAACCGCCACCGTCGCCGCCGAGAATGGTTCTGCTGTGACTCTGGACCCTTCGTCTAAAGCTCATTCGGTAACGACGCTCGATCATGAGAAGAAAGGGGATGACAAGTCGGAGGATCGGAGTCGAGATATTAAAAAATCGAAAAAAGGGAGTTCCCAAGGTGGGAAAGGTTCTTTCAGATTAGGGTTTTCTCAACGCTACGTCGAAGCTGAGCAAGTTGCCGCCGGCTGGCCTTCCTGGCTTAGTAGTGCTGCCGGCGAGGCCGTTCAGGGATGGGTGCCTCTCCGAGCTGATTCCTTCGAGAAGTTGGAGAAGATTGGACAAGGTACATACAGCAGTGTGTTTCGTGCTCGAGAAGTTGAGACAGGAAGGATGGTAGCATTGAAGAAGGTTCGTTTCGACAATTTTCAACCGGAGAGCATTAGGTTTATGGCACGGGAGATAATGATTTTGCGCAGGCTTGACCACCCAAACATCATGCAATTAGAAGGAATAATTACTTCCAAAATGTCTAGCAGCATTTACCTTGTATTTGAATACATGGAACATGATCTTGCAGGACTAGTGTCTTCTCCTGATGTCAAGTTCAGTGAGGCACAGGTAAAGTGTTATATGAGACAGCTTCTATCTGCAATTGAGCATTGCCACCTTCGGGGTATAATGCATAGGGACATTAAAGCATCCAACATTTTGGTAAACAATGAAGGAATTCTGAAGTTAGCAGATTTCGGATTAGCAAATGTCATAAACTCGAGAAACAAGCAAGCGCTAACAAGTCGAGTGGTGACATTATGGTATCGGCCTCCTGAGCTTCTGATGGGTTCTACAGATTACGGATTAACTGTTGACCTCTGGAGCATAGGATGTGTATTTGCAGAATTGCACTTGGGGAAACCCCTTCTTAAAGGAAGAACCGAGGTTGAACAATTGCACAAAATATTCAAACTTTGCGGCTCCCCACCGGAAGAGTTCTGGAAGAAAACAAAACTTCCTCATGCGGCTATGTTCAGACCCCAACATGCATATGAAAGTTCTCTAAATGAAAAGTGCAAAGAATTTGCACCCTCCGCAGTGAGCCTATTAGAAACTTTTCTTGCCATAGAACCTTACAAGCGCGGAACCGCCTCATCTGCTCTCATGTCTGAGTATTTCAAAACGAAGCCATATGCTTGTGATCCATCTACCTTGCCCAAGTATCCACCAAACAAAGAAATGGATGCCAAAAATCGTGAAGATGCACGACGGAAGAGGGCTAATGCAAGAGCCAAAGAGACGGGGGCAACACAAAGGCCTAGGAGAGTCAGAAGAAATTTCCAAGAATTCAACAGCCATAAAGTGCCAATCAAAGAGGAAGCAGAAGAAAGCATTCAACCTTCTCGACGGAATGGTAGCAATACTGCCAATCCGTCCAAAGAACAAGGTGAAATCTTCCAGAGAGATCCTCAGAAGCAACTATATGATACAACATCAGAGGGTTCCCAGGCCGCGACCGCACCAACTCAGAGAGGAGATAGCGCATTCACAGCCCCAATACCAGTCTCAGCGTCTAGTGGCTTTGCTTGGGTAAAGAAGCGAAAAGAGGAAGCTACATCTACAATATCAGATGGTCTTAAGAGCCAAATAAGTGCTCTGGATCCATCTTTTGCAAATTACACCTTTGAATTAACAAAAAAACAGAATGGACACACAAACATTCCAGTCAGTTCAGGCGTGCAGGACTATGAAATTCGAAACCAGCAAAGAAGAAAACATGATTTCCCCGAGTCTTTTGATGCATCCGAAGCACACCCATTCTTGGATATGTCCAATGAACTATATTCAAAGCCACCATCCAACGCCACAACCAATCTCGACAACGATGATACGGAATCACACATTGAATTCTCAGGACCTCTGTTAACACAACCCCATAGAATAGATGAACTCCTGCAAAGAAATGAAAATCACATCCGACGAGTGGCTCGAAAATCCAGGGCGAAACCCCTCGCTTTGACTGCGAAAGCTATGACAGCAAAGCGGCCATGGAAGCCCTCACCAGAAAGTGATAATATCGGGATGGCATACAAATTCTTAGGCTCACGTTATTACGACGACGAAAAGCTATGGGCTGGAAAGGAGAAGAAGAATGATTCATTGGACAAAACTGAAGGATCTTTTGGATTGTATAGTAGGACCAAAAGGTCAGTGTTTCAGTGCCTTAAAATGGATGTCATCTGCCAGCTTTTGTCGAGCTACTCGAGTCATCACATGTCGTACTGA 4209 45.81 MAKKDDSARPPLQRPTITLPPRPSMEAFFAGGPTGVSPGPMTLLSSYFADGAVDSPSFSQLLAGAMASPMAMGFFGTGSTPNYYAKDGTASELEFGMKQSKPLNLVVARPPLFSVPPGLSPSGLLNSPGFYPPQSPFGMSHQQALAQVTAQAALANSHMHMQQAEYQHSSVPAPTEPLTRDPSFSLDEASQLAILPSTSDTKSLIAEPTEVSHPDRKYQPPPPHVSDKPADDGYNWRKYGQKLVKGSEYPRSYYKCTHLNCPVKKKIERSPDGQITEIIYKGQHNHEPPPANKRARDNSEPSGCTNSLMKPECGLQNQAGILNKSSENVQLGSSDSEERADTEITDDRDEDEPNPKRQNIDAGTSGVALSHKTLTEPKIIVQTRSEVDLLDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCNVRKHVERSSTDSKAVVTTYEGKHNHDVPAARNSSHHTVNNTVPQIKPHKVVAQKHPLLKEMEYGTNDQRPAVLRLKEEQITVLFVFESKELHLPYAFCNLYPKTVLNDADAKGDTRRWVVDLIQFHWEDAMPTYISSYLVVKNNEKDLAVPKEEDKVIGGANNLTQKWLSFLMAHFPIGVDRPFFASFSLIDAVGIWWFMGCISSKHVAKAAASPVSNHRTRPTKPTTTTATVAAENGSAVTLDPSSKAHSVTTLDHEKKGDDKSEDRSRDIKKSKKGSSQGGKGSFRLGFSQRYVEAEQVAAGWPSWLSSAAGEAVQGWVPLRADSFEKLEKIGQGTYSSVFRAREVETGRMVALKKVRFDNFQPESIRFMAREIMILRRLDHPNIMQLEGIITSKMSSSIYLVFEYMEHDLAGLVSSPDVKFSEAQVKCYMRQLLSAIEHCHLRGIMHRDIKASNILVNNEGILKLADFGLANVINSRNKQALTSRVVTLWYRPPELLMGSTDYGLTVDLWSIGCVFAELHLGKPLLKGRTEVEQLHKIFKLCGSPPEEFWKKTKLPHAAMFRPQHAYESSLNEKCKEFAPSAVSLLETFLAIEPYKRGTASSALMSEYFKTKPYACDPSTLPKYPPNKEMDAKNREDARRKRANARAKETGATQRPRRVRRNFQEFNSHKVPIKEEAEESIQPSRRNGSNTANPSKEQGEIFQRDPQKQLYDTTSEGSQAATAPTQRGDSAFTAPIPVSASSGFAWVKKRKEEATSTISDGLKSQISALDPSFANYTFELTKKQNGHTNIPVSSGVQDYEIRNQQRRKHDFPESFDASEAHPFLDMSNELYSKPPSNATTNLDNDDTESHIEFSGPLLTQPHRIDELLQRNENHIRRVARKSRAKPLALTAKAMTAKRPWKPSPESDNIGMAYKFLGSRYYDDEKLWAGKEKKNDSLDKTEGSFGLYSRTKRSVFQCLKMDVICQLLSSYSSHHMSY 1402
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 5119750 5136539 - CePI673135_11g004760.1 Cec11g0476 215688
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cec11g0476 1402 MobiDBLite consensus disorder prediction 1108 1125 - -
Cec11g0476 1402 ProSiteProfiles Protein kinase domain profile. 750 1034 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g0476 1402 SMART WRKY_cls 230 288 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec11g0476 1402 SMART WRKY_cls 390 449 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec11g0476 1402 Coils Coil 1289 1309 - -
Cec11g0476 1402 MobiDBLite consensus disorder prediction 659 707 - -
Cec11g0476 1402 MobiDBLite consensus disorder prediction 1053 1107 - -
Cec11g0476 1402 ProSitePatterns Serine/Threonine protein kinases active-site signature. 870 882 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec11g0476 1402 MobiDBLite consensus disorder prediction 326 369 - -
Cec11g0476 1402 FunFam WRKY transcription factor 57 376 450 - -
Cec11g0476 1402 PANTHER CELL DIVISION PROTEIN KINASE 749 1034 IPR050108 GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER)
Cec11g0476 1402 Gene3D WRKY domain 223 290 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec11g0476 1402 Gene3D WRKY domain 375 451 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec11g0476 1402 FunFam probable serine/threonine-protein kinase At1g54610 833 1074 - -
Cec11g0476 1402 SUPERFAMILY WRKY DNA-binding domain 382 450 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec11g0476 1402 MobiDBLite consensus disorder prediction 673 700 - -
Cec11g0476 1402 FunFam probable serine/threonine-protein kinase At1g54610 737 832 - -
Cec11g0476 1402 SUPERFAMILY WRKY DNA-binding domain 227 289 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec11g0476 1402 SUPERFAMILY Protein kinase-like (PK-like) 744 1040 IPR011009 -
Cec11g0476 1402 CDD STKc_CDK9_like 750 1034 - -
Cec11g0476 1402 Gene3D Phosphorylase Kinase; domain 1 737 832 - -
Cec11g0476 1402 Pfam Protein kinase domain 750 1034 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g0476 1402 ProSiteProfiles WRKY domain profile. 385 450 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec11g0476 1402 MobiDBLite consensus disorder prediction 281 311 - -
Cec11g0476 1402 ProSitePatterns Protein kinases ATP-binding region signature. 756 779 IPR017441 GO:0005524(InterPro)
Cec11g0476 1402 Pfam WRKY DNA -binding domain 391 448 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec11g0476 1402 Pfam WRKY DNA -binding domain 231 287 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec11g0476 1402 Gene3D Transferase(Phosphotransferase) domain 1 833 1074 - -
Cec11g0476 1402 SMART serkin_6 750 1034 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g0476 1402 ProSiteProfiles WRKY domain profile. 225 289 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec11g0476 1402 MobiDBLite consensus disorder prediction 1132 1154 - -
Cec11g0476 1402 MobiDBLite consensus disorder prediction 1044 1159 - -
Cec11g0476 1402 FunFam WRKY transcription factor 221 290 - -
Cec11g0476 1402 MobiDBLite consensus disorder prediction 195 234 - -
Cec11g0476 1402 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g2623 Cec-Chr5:37015293 Cec11g0476 Cec-Chr11:5119750 8.80E-115 dispersed
Cec06g1425 Cec-Chr6:27788348 Cec11g0476 Cec-Chr11:5119750 8.20E-39 dispersed
Cec10g0454 Cec-Chr10:5399467 Cec11g0476 Cec-Chr11:5119750 4.80E-72 dispersed
Cec10g1167 Cec-Chr10:25499238 Cec11g0476 Cec-Chr11:5119750 1.30E-23 dispersed
Cec10g2071 Cec-Chr10:35430145 Cec11g0476 Cec-Chr11:5119750 7.70E-47 dispersed
Cec10g2249 Cec-Chr10:36799289 Cec11g0476 Cec-Chr11:5119750 3.10E-66 dispersed
Cec11g0067 Cec-Chr11:826153 Cec11g0476 Cec-Chr11:5119750 3.40E-147 dispersed
Cec11g0476 Cec-Chr11:5119750 Cec11g1444 Cec-Chr11:28606514 6.50E-62 dispersed
Cec11g0743 Cec-Chr11:8415714 Cec11g0476 Cec-Chr11:5119750 1.30E-16 dispersed
Cec11g0476 Cec-Chr11:5119750 Cec01g1747 Cec-Chr1:32065056 3.60E-185 transposed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30507 PF00069 Pkinase 4.10E-67 CL0016 Cec TF
72389 PF00069 Pkinase 4.10E-67 CL0016 Cec PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g0476 - - - 0.0