Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cec11g0476 | ATGGCTAAGAAGGACGATTCTGCAAGGCCTCCACTTCAGCGCCCCACCATTACTCTGCCGCCGCGCCCTTCTATGGAGGCTTTTTTCGCTGGCGGACCCACTGGAGTTAGCCCTGGCCCGATGACTCTTCTCTCCAGTTACTTCGCCGACGGTGCCGTTGACTCCCCCTCCTTCTCCCAGCTTCTCGCCGGAGCTATGGCCTCTCCGATGGCTATGGGGTTTTTCGGAACTGGGTCCACACCCAATTATTACGCCAAGGATGGAACCGCCTCGGAATTGGAATTTGGGATGAAACAATCGAAGCCGCTGAATTTAGTGGTAGCTCGGCCTCCTTTGTTCTCGGTCCCGCCGGGGCTTAGTCCTTCTGGGTTGCTTAATTCGCCTGGGTTTTATCCTCCTCAGAGTCCATTCGGAATGTCACACCAGCAAGCATTGGCTCAGGTTACTGCTCAAGCGGCATTGGCAAATTCTCATATGCATATGCAGCAAGCTGAATATCAACATTCTTCGGTACCAGCTCCTACAGAACCGTTGACACGGGATCCATCATTTTCTCTTGATGAAGCATCTCAACTGGCCATATTACCCTCCACTTCAGACACAAAAAGTCTGATTGCAGAACCGACAGAAGTCTCTCACCCTGACAGAAAATATCAACCTCCTCCTCCTCACGTCTCTGATAAACCTGCAGATGATGGCTATAATTGGCGTAAATATGGACAGAAGTTGGTTAAGGGCAGTGAATATCCCCGAAGCTATTACAAATGCACTCATTTGAATTGCCCTGTAAAAAAGAAGATTGAGCGCTCACCTGATGGTCAAATTACTGAAATTATTTACAAAGGACAGCACAACCACGAACCTCCTCCAGCCAACAAACGTGCAAGAGATAATAGTGAACCGAGTGGATGTACAAATTCTTTGATGAAGCCTGAATGTGGTTTGCAAAATCAAGCTGGAATTTTGAACAAGTCAAGTGAAAATGTGCAATTAGGGTCTAGCGACAGTGAAGAACGAGCTGATACAGAGATAACAGATGACAGAGATGAAGATGAGCCAAATCCAAAGAGGCAGAACATTGACGCAGGGACATCTGGTGTTGCCTTGTCACATAAAACACTCACAGAACCAAAAATCATTGTTCAAACAAGAAGTGAGGTTGACCTGTTAGATGACGGTTATAGGTGGCGCAAGTACGGGCAGAAAGTGGTTAAAGGAAATCCTAACCCTAGGAGCTACTACAAATGCACTAGTGCTGGGTGCAACGTCCGAAAGCATGTTGAGAGATCTTCAACAGACTCGAAAGCTGTTGTTACTACATACGAAGGGAAACATAACCATGATGTTCCTGCAGCTAGAAACAGCAGCCACCACACGGTCAACAATACTGTCCCCCAGATCAAACCACACAAAGTTGTAGCTCAGAAACATCCATTACTTAAAGAGATGGAATATGGAACTAATGACCAGAGACCTGCCGTTTTGCGGCTTAAAGAAGAGCAAATCACCGTTCTGTTTGTATTTGAGTCAAAAGAGCTCCATTTGCCTTATGCCTTCTGCAATTTATATCCCAAAACTGTTTTGAATGATGCTGATGCTAAGGGAGATACAAGGAGATGGGTAGTTGATTTGATACAGTTCCATTGGGAAGATGCTATGCCTACATACATCTCTTCTTATTTGGTTGTGAAAAACAATGAAAAAGATCTCGCAGTCCCAAAGGAGGAAGACAAGGTCATTGGTGGTGCCAACAACTTAACCCAAAAATGGCTCTCATTTCTTATGGCCCATTTCCCGATCGGGGTCGATCGCCCTTTCTTCGCGTCGTTTTCTCTGATCGATGCTGTCGGGATTTGGTGGTTCATGGGTTGCATTAGCTCCAAGCACGTAGCTAAGGCGGCAGCATCACCCGTTAGTAATCATCGCACCAGACCCACCAAACCCACCACCACAACCGCCACCGTCGCCGCCGAGAATGGTTCTGCTGTGACTCTGGACCCTTCGTCTAAAGCTCATTCGGTAACGACGCTCGATCATGAGAAGAAAGGGGATGACAAGTCGGAGGATCGGAGTCGAGATATTAAAAAATCGAAAAAAGGGAGTTCCCAAGGTGGGAAAGGTTCTTTCAGATTAGGGTTTTCTCAACGCTACGTCGAAGCTGAGCAAGTTGCCGCCGGCTGGCCTTCCTGGCTTAGTAGTGCTGCCGGCGAGGCCGTTCAGGGATGGGTGCCTCTCCGAGCTGATTCCTTCGAGAAGTTGGAGAAGATTGGACAAGGTACATACAGCAGTGTGTTTCGTGCTCGAGAAGTTGAGACAGGAAGGATGGTAGCATTGAAGAAGGTTCGTTTCGACAATTTTCAACCGGAGAGCATTAGGTTTATGGCACGGGAGATAATGATTTTGCGCAGGCTTGACCACCCAAACATCATGCAATTAGAAGGAATAATTACTTCCAAAATGTCTAGCAGCATTTACCTTGTATTTGAATACATGGAACATGATCTTGCAGGACTAGTGTCTTCTCCTGATGTCAAGTTCAGTGAGGCACAGGTAAAGTGTTATATGAGACAGCTTCTATCTGCAATTGAGCATTGCCACCTTCGGGGTATAATGCATAGGGACATTAAAGCATCCAACATTTTGGTAAACAATGAAGGAATTCTGAAGTTAGCAGATTTCGGATTAGCAAATGTCATAAACTCGAGAAACAAGCAAGCGCTAACAAGTCGAGTGGTGACATTATGGTATCGGCCTCCTGAGCTTCTGATGGGTTCTACAGATTACGGATTAACTGTTGACCTCTGGAGCATAGGATGTGTATTTGCAGAATTGCACTTGGGGAAACCCCTTCTTAAAGGAAGAACCGAGGTTGAACAATTGCACAAAATATTCAAACTTTGCGGCTCCCCACCGGAAGAGTTCTGGAAGAAAACAAAACTTCCTCATGCGGCTATGTTCAGACCCCAACATGCATATGAAAGTTCTCTAAATGAAAAGTGCAAAGAATTTGCACCCTCCGCAGTGAGCCTATTAGAAACTTTTCTTGCCATAGAACCTTACAAGCGCGGAACCGCCTCATCTGCTCTCATGTCTGAGTATTTCAAAACGAAGCCATATGCTTGTGATCCATCTACCTTGCCCAAGTATCCACCAAACAAAGAAATGGATGCCAAAAATCGTGAAGATGCACGACGGAAGAGGGCTAATGCAAGAGCCAAAGAGACGGGGGCAACACAAAGGCCTAGGAGAGTCAGAAGAAATTTCCAAGAATTCAACAGCCATAAAGTGCCAATCAAAGAGGAAGCAGAAGAAAGCATTCAACCTTCTCGACGGAATGGTAGCAATACTGCCAATCCGTCCAAAGAACAAGGTGAAATCTTCCAGAGAGATCCTCAGAAGCAACTATATGATACAACATCAGAGGGTTCCCAGGCCGCGACCGCACCAACTCAGAGAGGAGATAGCGCATTCACAGCCCCAATACCAGTCTCAGCGTCTAGTGGCTTTGCTTGGGTAAAGAAGCGAAAAGAGGAAGCTACATCTACAATATCAGATGGTCTTAAGAGCCAAATAAGTGCTCTGGATCCATCTTTTGCAAATTACACCTTTGAATTAACAAAAAAACAGAATGGACACACAAACATTCCAGTCAGTTCAGGCGTGCAGGACTATGAAATTCGAAACCAGCAAAGAAGAAAACATGATTTCCCCGAGTCTTTTGATGCATCCGAAGCACACCCATTCTTGGATATGTCCAATGAACTATATTCAAAGCCACCATCCAACGCCACAACCAATCTCGACAACGATGATACGGAATCACACATTGAATTCTCAGGACCTCTGTTAACACAACCCCATAGAATAGATGAACTCCTGCAAAGAAATGAAAATCACATCCGACGAGTGGCTCGAAAATCCAGGGCGAAACCCCTCGCTTTGACTGCGAAAGCTATGACAGCAAAGCGGCCATGGAAGCCCTCACCAGAAAGTGATAATATCGGGATGGCATACAAATTCTTAGGCTCACGTTATTACGACGACGAAAAGCTATGGGCTGGAAAGGAGAAGAAGAATGATTCATTGGACAAAACTGAAGGATCTTTTGGATTGTATAGTAGGACCAAAAGGTCAGTGTTTCAGTGCCTTAAAATGGATGTCATCTGCCAGCTTTTGTCGAGCTACTCGAGTCATCACATGTCGTACTGA | 4209 | 45.81 | MAKKDDSARPPLQRPTITLPPRPSMEAFFAGGPTGVSPGPMTLLSSYFADGAVDSPSFSQLLAGAMASPMAMGFFGTGSTPNYYAKDGTASELEFGMKQSKPLNLVVARPPLFSVPPGLSPSGLLNSPGFYPPQSPFGMSHQQALAQVTAQAALANSHMHMQQAEYQHSSVPAPTEPLTRDPSFSLDEASQLAILPSTSDTKSLIAEPTEVSHPDRKYQPPPPHVSDKPADDGYNWRKYGQKLVKGSEYPRSYYKCTHLNCPVKKKIERSPDGQITEIIYKGQHNHEPPPANKRARDNSEPSGCTNSLMKPECGLQNQAGILNKSSENVQLGSSDSEERADTEITDDRDEDEPNPKRQNIDAGTSGVALSHKTLTEPKIIVQTRSEVDLLDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCNVRKHVERSSTDSKAVVTTYEGKHNHDVPAARNSSHHTVNNTVPQIKPHKVVAQKHPLLKEMEYGTNDQRPAVLRLKEEQITVLFVFESKELHLPYAFCNLYPKTVLNDADAKGDTRRWVVDLIQFHWEDAMPTYISSYLVVKNNEKDLAVPKEEDKVIGGANNLTQKWLSFLMAHFPIGVDRPFFASFSLIDAVGIWWFMGCISSKHVAKAAASPVSNHRTRPTKPTTTTATVAAENGSAVTLDPSSKAHSVTTLDHEKKGDDKSEDRSRDIKKSKKGSSQGGKGSFRLGFSQRYVEAEQVAAGWPSWLSSAAGEAVQGWVPLRADSFEKLEKIGQGTYSSVFRAREVETGRMVALKKVRFDNFQPESIRFMAREIMILRRLDHPNIMQLEGIITSKMSSSIYLVFEYMEHDLAGLVSSPDVKFSEAQVKCYMRQLLSAIEHCHLRGIMHRDIKASNILVNNEGILKLADFGLANVINSRNKQALTSRVVTLWYRPPELLMGSTDYGLTVDLWSIGCVFAELHLGKPLLKGRTEVEQLHKIFKLCGSPPEEFWKKTKLPHAAMFRPQHAYESSLNEKCKEFAPSAVSLLETFLAIEPYKRGTASSALMSEYFKTKPYACDPSTLPKYPPNKEMDAKNREDARRKRANARAKETGATQRPRRVRRNFQEFNSHKVPIKEEAEESIQPSRRNGSNTANPSKEQGEIFQRDPQKQLYDTTSEGSQAATAPTQRGDSAFTAPIPVSASSGFAWVKKRKEEATSTISDGLKSQISALDPSFANYTFELTKKQNGHTNIPVSSGVQDYEIRNQQRRKHDFPESFDASEAHPFLDMSNELYSKPPSNATTNLDNDDTESHIEFSGPLLTQPHRIDELLQRNENHIRRVARKSRAKPLALTAKAMTAKRPWKPSPESDNIGMAYKFLGSRYYDDEKLWAGKEKKNDSLDKTEGSFGLYSRTKRSVFQCLKMDVICQLLSSYSSHHMSY | 1402 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 5119750 | 5136539 | - | CePI673135_11g004760.1 | Cec11g0476 | 215688 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cec11g0476 | 1402 | MobiDBLite | consensus disorder prediction | 1108 | 1125 | - | - | |
| Cec11g0476 | 1402 | ProSiteProfiles | Protein kinase domain profile. | 750 | 1034 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
| Cec11g0476 | 1402 | SMART | WRKY_cls | 230 | 288 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
| Cec11g0476 | 1402 | SMART | WRKY_cls | 390 | 449 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
| Cec11g0476 | 1402 | Coils | Coil | 1289 | 1309 | - | - | |
| Cec11g0476 | 1402 | MobiDBLite | consensus disorder prediction | 659 | 707 | - | - | |
| Cec11g0476 | 1402 | MobiDBLite | consensus disorder prediction | 1053 | 1107 | - | - | |
| Cec11g0476 | 1402 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 870 | 882 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
| Cec11g0476 | 1402 | MobiDBLite | consensus disorder prediction | 326 | 369 | - | - | |
| Cec11g0476 | 1402 | FunFam | WRKY transcription factor 57 | 376 | 450 | - | - | |
| Cec11g0476 | 1402 | PANTHER | CELL DIVISION PROTEIN KINASE | 749 | 1034 | IPR050108 | GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER) | |
| Cec11g0476 | 1402 | Gene3D | WRKY domain | 223 | 290 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
| Cec11g0476 | 1402 | Gene3D | WRKY domain | 375 | 451 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
| Cec11g0476 | 1402 | FunFam | probable serine/threonine-protein kinase At1g54610 | 833 | 1074 | - | - | |
| Cec11g0476 | 1402 | SUPERFAMILY | WRKY DNA-binding domain | 382 | 450 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
| Cec11g0476 | 1402 | MobiDBLite | consensus disorder prediction | 673 | 700 | - | - | |
| Cec11g0476 | 1402 | FunFam | probable serine/threonine-protein kinase At1g54610 | 737 | 832 | - | - | |
| Cec11g0476 | 1402 | SUPERFAMILY | WRKY DNA-binding domain | 227 | 289 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
| Cec11g0476 | 1402 | SUPERFAMILY | Protein kinase-like (PK-like) | 744 | 1040 | IPR011009 | - | |
| Cec11g0476 | 1402 | CDD | STKc_CDK9_like | 750 | 1034 | - | - | |
| Cec11g0476 | 1402 | Gene3D | Phosphorylase Kinase; domain 1 | 737 | 832 | - | - | |
| Cec11g0476 | 1402 | Pfam | Protein kinase domain | 750 | 1034 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
| Cec11g0476 | 1402 | ProSiteProfiles | WRKY domain profile. | 385 | 450 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
| Cec11g0476 | 1402 | MobiDBLite | consensus disorder prediction | 281 | 311 | - | - | |
| Cec11g0476 | 1402 | ProSitePatterns | Protein kinases ATP-binding region signature. | 756 | 779 | IPR017441 | GO:0005524(InterPro) | |
| Cec11g0476 | 1402 | Pfam | WRKY DNA -binding domain | 391 | 448 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
| Cec11g0476 | 1402 | Pfam | WRKY DNA -binding domain | 231 | 287 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
| Cec11g0476 | 1402 | Gene3D | Transferase(Phosphotransferase) domain 1 | 833 | 1074 | - | - | |
| Cec11g0476 | 1402 | SMART | serkin_6 | 750 | 1034 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
| Cec11g0476 | 1402 | ProSiteProfiles | WRKY domain profile. | 225 | 289 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
| Cec11g0476 | 1402 | MobiDBLite | consensus disorder prediction | 1132 | 1154 | - | - | |
| Cec11g0476 | 1402 | MobiDBLite | consensus disorder prediction | 1044 | 1159 | - | - | |
| Cec11g0476 | 1402 | FunFam | WRKY transcription factor | 221 | 290 | - | - | |
| Cec11g0476 | 1402 | MobiDBLite | consensus disorder prediction | 195 | 234 | - | - | |
| Cec11g0476 | 1402 | MobiDBLite | consensus disorder prediction | 1 | 32 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cec05g2623 | Cec-Chr5:37015293 | Cec11g0476 | Cec-Chr11:5119750 | 8.80E-115 | dispersed | |
| Cec06g1425 | Cec-Chr6:27788348 | Cec11g0476 | Cec-Chr11:5119750 | 8.20E-39 | dispersed | |
| Cec10g0454 | Cec-Chr10:5399467 | Cec11g0476 | Cec-Chr11:5119750 | 4.80E-72 | dispersed | |
| Cec10g1167 | Cec-Chr10:25499238 | Cec11g0476 | Cec-Chr11:5119750 | 1.30E-23 | dispersed | |
| Cec10g2071 | Cec-Chr10:35430145 | Cec11g0476 | Cec-Chr11:5119750 | 7.70E-47 | dispersed | |
| Cec10g2249 | Cec-Chr10:36799289 | Cec11g0476 | Cec-Chr11:5119750 | 3.10E-66 | dispersed | |
| Cec11g0067 | Cec-Chr11:826153 | Cec11g0476 | Cec-Chr11:5119750 | 3.40E-147 | dispersed | |
| Cec11g0476 | Cec-Chr11:5119750 | Cec11g1444 | Cec-Chr11:28606514 | 6.50E-62 | dispersed | |
| Cec11g0743 | Cec-Chr11:8415714 | Cec11g0476 | Cec-Chr11:5119750 | 1.30E-16 | dispersed | |
| Cec11g0476 | Cec-Chr11:5119750 | Cec01g1747 | Cec-Chr1:32065056 | 3.60E-185 | transposed |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 30507 | PF00069 | Pkinase | 4.10E-67 | CL0016 | Cec | TF | |
| 72389 | PF00069 | Pkinase | 4.10E-67 | CL0016 | Cec | PK |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cec11g0476 | - | - | - | 0.0 |