Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec11g0505 | ATGGATTTGTTTTTAATTGCCTTGTTGTTATGCTTCGATTCACCTCGTCGGAACGCCTCCCATCGTTCTCGGCGATTGCAATTGGATTCCCGACTTCTTGGAGTCATCAATGCGTTCTTGATTTGCTTTGCCCACCTTGTTTGTTCGATTCATATAAGGGAGGCCATGAATGCGAATAGTCCGCGATTTCAATCGTTTGGTCAAACTGAGATTAACTGGGACAAGCTTGATAAAGCGAAATTTTATGGCGTAGGAGCTGGTCTCTTTACAGGGATTACAGTTGCACTGTACCCTGTTTCTGTTGTAAAAACGAGGATGCAGGTTGCTGTAAAGGATTCTGCCGAGAAAAATGCCCTGTCTGTTATTAAGGGCTTACTGAAGAATGACGGGGTTCCTGGTCTTTACAGAGGGTTTGGCACAGTAATAACTGGTGCAATTCCTGCCAGGATTATCTTTCTTACTGCTTTGGAGACAACCAAAGTGGGAGCCTATAAACTGGTTGAGCCATTTAAATTTTCTGAACCTACACAGGCTGCTATGGCAAATGGGTTAGCTGGCATGACTGCCTCACTTTTTTCTCAAGCTGTTTTTGTTCCAATTGATGTGATTAGTCAGAAGCTCATGGTTCAAGGATACTCAGGAAATACAAGATATAATGGGGGTTTAGATGTTGCTCGTAAACTGATAAAGTCCAATGGGATCCGGGGATTGTATAAAGGTTTTGGGTTATCTGTTATGACCTACTCTCCATCTAGTGCTGTATGGTGGGCAAGTTATGGTGCAAGTCAACGCGTCATCTGGAGATTCTTAGGTCAAAACTCTGCTTCTGAGAAATTTGCACCCAGCCATACCCAACTTATTTCAGTTCAAGCTGCGGGTGGAATAATTGCAGGTGCAACAGCTTCCTGCATTACAACACCTTTGGACACCATAAAGACTCGCTTACAGGTGATGGGTGATAAAGGGAAGACAGCAAGACAAATTGTTGAAAGCTTGATCGCTGAGGATGGATGGAAAGGTTTATATAGGGGGCTGGGTCCTCGGTTTTTCAGCATGTCGGCCTGGGGAACCTCGATGATATTGGCTTACGAGTACTTGAAGCGGTTGTGTGCAAAAGATGAACAGACTTGA | 1131 | 44.12 | MDLFLIALLLCFDSPRRNASHRSRRLQLDSRLLGVINAFLICFAHLVCSIHIREAMNANSPRFQSFGQTEINWDKLDKAKFYGVGAGLFTGITVALYPVSVVKTRMQVAVKDSAEKNALSVIKGLLKNDGVPGLYRGFGTVITGAIPARIIFLTALETTKVGAYKLVEPFKFSEPTQAAMANGLAGMTASLFSQAVFVPIDVISQKLMVQGYSGNTRYNGGLDVARKLIKSNGIRGLYKGFGLSVMTYSPSSAVWWASYGASQRVIWRFLGQNSASEKFAPSHTQLISVQAAGGIIAGATASCITTPLDTIKTRLQVMGDKGKTARQIVESLIAEDGWKGLYRGLGPRFFSMSAWGTSMILAYEYLKRLCAKDEQT | 376 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 5353691 | 5361510 | - | CePI673135_11g005050.1 | Cec11g0505 | 215717 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec11g0505 | 376 | Gene3D | Mitochondrial carrier domain | 82 | 376 | IPR023395 | - | |
Cec11g0505 | 376 | PRINTS | Mitochondrial carrier protein signature | 294 | 316 | IPR002067 | GO:0055085(InterPro) | |
Cec11g0505 | 376 | PRINTS | Mitochondrial carrier protein signature | 238 | 256 | IPR002067 | GO:0055085(InterPro) | |
Cec11g0505 | 376 | PRINTS | Mitochondrial carrier protein signature | 94 | 108 | IPR002067 | GO:0055085(InterPro) | |
Cec11g0505 | 376 | SUPERFAMILY | Mitochondrial carrier | 74 | 366 | IPR023395 | - | |
Cec11g0505 | 376 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 285 | 369 | IPR018108 | - | |
Cec11g0505 | 376 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 74 | 162 | IPR018108 | - | |
Cec11g0505 | 376 | PANTHER | MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J | 67 | 375 | - | - | |
Cec11g0505 | 376 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 177 | 265 | IPR018108 | - | |
Cec11g0505 | 376 | FunFam | Mitochondrial substrate carrier family protein | 82 | 373 | - | - | |
Cec11g0505 | 376 | Pfam | Mitochondrial carrier protein | 86 | 160 | IPR018108 | - | |
Cec11g0505 | 376 | Pfam | Mitochondrial carrier protein | 179 | 266 | IPR018108 | - | |
Cec11g0505 | 376 | Pfam | Mitochondrial carrier protein | 290 | 372 | IPR018108 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec05g0805 | Cec-Chr5:6795491 | Cec11g0505 | Cec-Chr11:5353691 | 2.60E-86 | dispersed | |
Cec05g1996 | Cec-Chr5:31957681 | Cec11g0505 | Cec-Chr11:5353691 | 3.10E-69 | dispersed | |
Cec09g0176 | Cec-Chr9:1516824 | Cec11g0505 | Cec-Chr11:5353691 | 6.30E-12 | dispersed | |
Cec10g0174 | Cec-Chr10:1696166 | Cec11g0505 | Cec-Chr11:5353691 | 1.70E-10 | dispersed | |
Cec11g0505 | Cec-Chr11:5353691 | Cec09g0081 | Cec-Chr9:712596 | 6.00E-71 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec11g0505 | K15121 | - | csv:101206140 | 613.609 |