Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g0505 ATGGATTTGTTTTTAATTGCCTTGTTGTTATGCTTCGATTCACCTCGTCGGAACGCCTCCCATCGTTCTCGGCGATTGCAATTGGATTCCCGACTTCTTGGAGTCATCAATGCGTTCTTGATTTGCTTTGCCCACCTTGTTTGTTCGATTCATATAAGGGAGGCCATGAATGCGAATAGTCCGCGATTTCAATCGTTTGGTCAAACTGAGATTAACTGGGACAAGCTTGATAAAGCGAAATTTTATGGCGTAGGAGCTGGTCTCTTTACAGGGATTACAGTTGCACTGTACCCTGTTTCTGTTGTAAAAACGAGGATGCAGGTTGCTGTAAAGGATTCTGCCGAGAAAAATGCCCTGTCTGTTATTAAGGGCTTACTGAAGAATGACGGGGTTCCTGGTCTTTACAGAGGGTTTGGCACAGTAATAACTGGTGCAATTCCTGCCAGGATTATCTTTCTTACTGCTTTGGAGACAACCAAAGTGGGAGCCTATAAACTGGTTGAGCCATTTAAATTTTCTGAACCTACACAGGCTGCTATGGCAAATGGGTTAGCTGGCATGACTGCCTCACTTTTTTCTCAAGCTGTTTTTGTTCCAATTGATGTGATTAGTCAGAAGCTCATGGTTCAAGGATACTCAGGAAATACAAGATATAATGGGGGTTTAGATGTTGCTCGTAAACTGATAAAGTCCAATGGGATCCGGGGATTGTATAAAGGTTTTGGGTTATCTGTTATGACCTACTCTCCATCTAGTGCTGTATGGTGGGCAAGTTATGGTGCAAGTCAACGCGTCATCTGGAGATTCTTAGGTCAAAACTCTGCTTCTGAGAAATTTGCACCCAGCCATACCCAACTTATTTCAGTTCAAGCTGCGGGTGGAATAATTGCAGGTGCAACAGCTTCCTGCATTACAACACCTTTGGACACCATAAAGACTCGCTTACAGGTGATGGGTGATAAAGGGAAGACAGCAAGACAAATTGTTGAAAGCTTGATCGCTGAGGATGGATGGAAAGGTTTATATAGGGGGCTGGGTCCTCGGTTTTTCAGCATGTCGGCCTGGGGAACCTCGATGATATTGGCTTACGAGTACTTGAAGCGGTTGTGTGCAAAAGATGAACAGACTTGA 1131 44.12 MDLFLIALLLCFDSPRRNASHRSRRLQLDSRLLGVINAFLICFAHLVCSIHIREAMNANSPRFQSFGQTEINWDKLDKAKFYGVGAGLFTGITVALYPVSVVKTRMQVAVKDSAEKNALSVIKGLLKNDGVPGLYRGFGTVITGAIPARIIFLTALETTKVGAYKLVEPFKFSEPTQAAMANGLAGMTASLFSQAVFVPIDVISQKLMVQGYSGNTRYNGGLDVARKLIKSNGIRGLYKGFGLSVMTYSPSSAVWWASYGASQRVIWRFLGQNSASEKFAPSHTQLISVQAAGGIIAGATASCITTPLDTIKTRLQVMGDKGKTARQIVESLIAEDGWKGLYRGLGPRFFSMSAWGTSMILAYEYLKRLCAKDEQT 376
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5353691 5361510 - CePI673135_11g005050.1 Cec11g0505 215717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g0505 376 Gene3D Mitochondrial carrier domain 82 376 IPR023395 -
Cec11g0505 376 PRINTS Mitochondrial carrier protein signature 294 316 IPR002067 GO:0055085(InterPro)
Cec11g0505 376 PRINTS Mitochondrial carrier protein signature 238 256 IPR002067 GO:0055085(InterPro)
Cec11g0505 376 PRINTS Mitochondrial carrier protein signature 94 108 IPR002067 GO:0055085(InterPro)
Cec11g0505 376 SUPERFAMILY Mitochondrial carrier 74 366 IPR023395 -
Cec11g0505 376 ProSiteProfiles Solute carrier (Solcar) repeat profile. 285 369 IPR018108 -
Cec11g0505 376 ProSiteProfiles Solute carrier (Solcar) repeat profile. 74 162 IPR018108 -
Cec11g0505 376 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 67 375 - -
Cec11g0505 376 ProSiteProfiles Solute carrier (Solcar) repeat profile. 177 265 IPR018108 -
Cec11g0505 376 FunFam Mitochondrial substrate carrier family protein 82 373 - -
Cec11g0505 376 Pfam Mitochondrial carrier protein 86 160 IPR018108 -
Cec11g0505 376 Pfam Mitochondrial carrier protein 179 266 IPR018108 -
Cec11g0505 376 Pfam Mitochondrial carrier protein 290 372 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g0805 Cec-Chr5:6795491 Cec11g0505 Cec-Chr11:5353691 2.60E-86 dispersed
Cec05g1996 Cec-Chr5:31957681 Cec11g0505 Cec-Chr11:5353691 3.10E-69 dispersed
Cec09g0176 Cec-Chr9:1516824 Cec11g0505 Cec-Chr11:5353691 6.30E-12 dispersed
Cec10g0174 Cec-Chr10:1696166 Cec11g0505 Cec-Chr11:5353691 1.70E-10 dispersed
Cec11g0505 Cec-Chr11:5353691 Cec09g0081 Cec-Chr9:712596 6.00E-71 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g0505 K15121 - csv:101206140 613.609