Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g0528 ATGTTGTTCCACCCTAAACTCAAAAGAAAAAGAAAAGAAAAAAGTGAAGGAGATTCAAAGAAAAAGGTTAAAAAGATGAGTGGGGCAGGAGGAAGTGCAAAGGATGATGATGAAGAGAAGAGCAGTATTAGCACTCATTTAATGGGAATGAAGAGAACTGAGGCTACTGTTTCCTGTCTTATGGCTTCTTTATTGTTTTGGGCTTCTGCAATAAATGGCTTGTTATCTCCCAAAGGTGTTAACTATGAAGTTCAAGCTTTGATGGGTATAAAAGCTTCTCTTCAAGATCCCCATGGTGTGCTTGAGAATTGGGATGGGGATTCTGTTGACCCATGTAGTTGGACTATGGTTACTTGCTCTCCTGAGAGCCTTGTCATTGGCTTAGGGACTCCAAGCCAGAACCTATCTGGGACTCTTTCTCCAACCATTGGGAATTTGACAAACCTTCAAATTGTGCTGTTGCAGAACAACAATATAACAGGCCCAATTCCCTCAGAGCTTGGGAGGCTCTCAAAGCTCCAAACACTTGACCTATCAAACAATTTCTTCACAGGGGAAATTCCTTCTCCTTTAGGCCATTTGAGAAGCCTACAGTACTTGAGGCTTAACAACAACAGTCTTTCTGGGGTAATTCCAATGTCTTTAGCTAACATGACACAACTTGCCTTTCTTGATGTGTCTTATAATAATATCAGTGGCCCTCTGCCTAGATTTCCCAGCAAAACATTCAACATTGTTGGGAACCCTCTGATTTGTGCAACTGGGTCCGAGGCCGGTTGCCACGGTACAACTCTAATGCCCATGTCCATGAATTTGAACAGTACACAAACTGGTTTACCTGCTGTGAAATTGAAGAGTCATAAAATGGCCCTTACATTTGGCTTGAGCCTAGCTTGCCTATGTCTGATTGTTCTTGTATTTGGACTGTTCATATGGTGGAGAAAACGAAGCAATCGACCTACATTCTTCGATGTAAAAGACCAACAACATGAGGAAATTTCACTTGGAAATCTGAGAAGGTTCCAATTTAGAGAACTTCAGATAGCAACAAACAATTTCAGCAGCAAGAACATACTAGGAAAGGGAGGTTTTGGAAATGTTTACAAAGGAATTCTTTCGGATGGAATGGTTGTTGCTGTTAAAAGGCTCAAAGATGGCAATGCAAGCAGAGGCGAAATCCAGTTTCAGACTGAAGTTGAGATGATCAGCCTAGCCGTGCACCGTCATCTCCTCAGATTATACGGATTTTGCAACACACCAACTGAAAGGCTTCTTGTTTACCCATATATGTCGAATGGAAGTGTTGCATCACGTCTCAAAGGAAAACCGGTATTAGACTGGGGAACAAGGAAGAGGATTGCTATAGGAGCTGCAAGGGGATTGTTATACCTACATGAACAGTGTGACCCAAAGATAATACATAGAGATGTTAAGGCTGCAAACATATTGCTTGATGACTACTGCGAGGCTGTCGTCGGAGATTTCGGGTTAGCAAAGCTTCTGGATCATCAAGATTCACATGTCACAACTGCTGTGAGAGGCACCGTGGGACATATAGCTCCTGAGTATTTATCCACCGGACAGTCCTCCGAGAAAACGGATGTTTTCGGCTTTGGAATCCTACTCCTTGAACTGATCACAGGGCAGAGAGCCCTTGAGTTTGGCAAAGCAGCTAATCAGAAAGGAGGCATTCTTGACTGGGTGAAGAAGATTCACCTAGAGAAGAAGCTGGAAATGTTAGTGGACAAGGATCTGAAAGCCAACTATGACAGAGTTGAACTAGAGGAGATGGTTCAAGTGGCTTTGTTGTGCACACAATACCTACCAGGACATAGACCAAAGATGTCAGAAGTTGTCAGAATGCTTGAAGGAGAAGGGCTTGCTGTGAGATGGGAAGCTTCTCAGAGAGTTGACTCAACAAAGTGCAAACCCCATGATTTCTCTTCCTCAGACAGATACTCTGATCTCACAGATGATTCATCATTGTTGGTTCAAGCCATGGAGCTCTCTGGTCCAAGGTGA 2022 43.13 MLFHPKLKRKRKEKSEGDSKKKVKKMSGAGGSAKDDDEEKSSISTHLMGMKRTEATVSCLMASLLFWASAINGLLSPKGVNYEVQALMGIKASLQDPHGVLENWDGDSVDPCSWTMVTCSPESLVIGLGTPSQNLSGTLSPTIGNLTNLQIVLLQNNNITGPIPSELGRLSKLQTLDLSNNFFTGEIPSPLGHLRSLQYLRLNNNSLSGVIPMSLANMTQLAFLDVSYNNISGPLPRFPSKTFNIVGNPLICATGSEAGCHGTTLMPMSMNLNSTQTGLPAVKLKSHKMALTFGLSLACLCLIVLVFGLFIWWRKRSNRPTFFDVKDQQHEEISLGNLRRFQFRELQIATNNFSSKNILGKGGFGNVYKGILSDGMVVAVKRLKDGNASRGEIQFQTEVEMISLAVHRHLLRLYGFCNTPTERLLVYPYMSNGSVASRLKGKPVLDWGTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEFGKAANQKGGILDWVKKIHLEKKLEMLVDKDLKANYDRVELEEMVQVALLCTQYLPGHRPKMSEVVRMLEGEGLAVRWEASQRVDSTKCKPHDFSSSDRYSDLTDDSSLLVQAMELSGPR 673
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5619330 5624476 - CePI673135_11g005280.1 Cec11g0528 215740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g0528 673 SMART serkin_6 353 622 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g0528 673 FunFam Somatic embryogenesis receptor-like kinase 1 430 642 - -
Cec11g0528 673 Pfam Leucine rich repeat N-terminal domain 81 120 IPR013210 -
Cec11g0528 673 MobiDBLite consensus disorder prediction 11 41 - -
Cec11g0528 673 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 61 673 - -
Cec11g0528 673 Gene3D Ribonuclease Inhibitor 80 262 IPR032675 -
Cec11g0528 673 FunFam Somatic embryogenesis receptor kinase 1 322 429 - -
Cec11g0528 673 SUPERFAMILY L domain-like 82 352 - -
Cec11g0528 673 ProSitePatterns Protein kinases ATP-binding region signature. 359 381 IPR017441 GO:0005524(InterPro)
Cec11g0528 673 Gene3D Phosphorylase Kinase; domain 1 322 429 - -
Cec11g0528 673 MobiDBLite consensus disorder prediction 1 41 - -
Cec11g0528 673 Gene3D Transferase(Phosphotransferase) domain 1 430 642 - -
Cec11g0528 673 Pfam Protein tyrosine and serine/threonine kinase 356 622 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec11g0528 673 Pfam Leucine Rich Repeat 148 170 IPR001611 GO:0005515(InterPro)
Cec11g0528 673 FunFam Putative LRR receptor-like serine/threonine-protein kinase 80 262 - -
Cec11g0528 673 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec11g0528 673 ProSiteProfiles Protein kinase domain profile. 353 608 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g0528 673 Pfam Leucine rich repeat 172 231 IPR001611 GO:0005515(InterPro)
Cec11g0528 673 SUPERFAMILY Protein kinase-like (PK-like) 329 623 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g2553 Cec-Chr5:36547815 Cec11g0528 Cec-Chr11:5619330 3.60E-230 dispersed
Cec11g0528 Cec-Chr11:5619330 Cec11g0552 Cec-Chr11:6039190 3.90E-73 dispersed
Cec01g0751 Cec-Chr1:8201332 Cec11g0528 Cec-Chr11:5619330 2.40E-218 transposed
Cec06g1457 Cec-Chr6:28075600 Cec11g0528 Cec-Chr11:5619330 4.00E-184 transposed
Cec07g1023 Cec-Chr7:24928270 Cec11g0528 Cec-Chr11:5619330 3.20E-138 transposed
Cec08g1845 Cec-Chr8:29313149 Cec11g0528 Cec-Chr11:5619330 3.20E-194 transposed
Cec09g1638 Cec-Chr9:29586358 Cec11g0528 Cec-Chr11:5619330 1.20E-122 transposed
Cec10g0926 Cec-Chr10:20516035 Cec11g0528 Cec-Chr11:5619330 4.90E-131 transposed
Cec08g0305 Cec-Chr8:6684058 Cec11g0528 Cec-Chr11:5619330 1.00E-137 transposed
Cec11g0528 Cec-Chr11:5619330 Cec11g1765 Cec-Chr11:31850201 1.70E-57 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72392 PF00069 Pkinase 7.90E-44 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g0528 - - - 0.0