Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g0552 ATGGCTTCACCTTCTCCAAGTATTTCTCCTCCTGAGAATCCATCAGATTCCTCAGTTTCTTCACCTCCTTCTCCTTCTTCTCCGGTGGAGTCTGCAACCTCTCCCTCGTCTCCCACATCTTCTGAGCCTAATCAGACTGGTGAACCTCCTTCATCACTTTCTAGTTCTTCAGCTCCACCTCCTCAGTCACCACCAGCTGTTCCTGATGCTCCTCCTCCTTCTCCTCCATTGTCTCCTCCTCCATTGACAGCATCACCACCTGCAACACCAGCATCCCCACCTCCTTCTCCCCCTGCTGGTTCACCACCTTCACCTCCCCAATCTTCGCCCTCGCCGCCATCACCTCCGCCACCTTCAACACCATCCTCCCCACCACCACCACCACCTTCAACATCAACCTCTCCACCACCACCTTCAACAACATCACCACCACCTTCCTCTGCATCACCAACTCCCCCAGAGAGATCAACTACCTCTCCTCCTCCTCAAACTTCACCTCCCCCTCCTGATTTATCACCTCCGCCGCCACCAGCAGCAGCAGATGGTTCTCCACCTCCTGCATCCAATCCTAGACCTCCATCTTCAACGCCCTCTCCCCCTCCCCCTGATACAATTTCACCTTCTCCACCTCCACCAACTAATGTCCCAACACCACCTTCATCAACAGGAGAATCACCTAAGGTATCTCCCCCATCCCACAAGGCTTCTTCTCCTCCTTCTGATTCTCAATCTCCACCTTCAGATAACTCCCCTCCACCAAGATCCACAGTACCATCACCTCCTTCTTCGGTTCCTTCATCGTCTGCTCCTCCTCCAGTTAGTGACCCTGGTTCTCCAACTAATTCTTCTGGTGGAACTCCTGTTACCCCTCCAACTTCTGTTACACCAGAACGACCAATTGCAACAATCAATGGTGGTACCAATGTTACAGCAAATAACTCAACCACTAGCAAGGGGGGTTTCAGCACTGGAGCATCTGTGGCAGTTGGCAGTGTGGTTGGTGTTCTAGTGCTGAGTCTTGTTATCATGGCTCTGTGGTTTGTTCAGAAACGGAAGAGAAGAAAGAGGAATATCCCTTACACCATGGCTTCTCCTTTTTCCTCGCAAAACTCAGATTCCCTTTTCCTAAGGCCCCATTCTTCAGCTCCTGTAGTAGGAAGTCGTACTGACAGTGATTTCAAGTATTCATCATCGGAAGGAGGTGGAGTAGGTAATTCCAGATCGTTTGCTTATGATGACCTACACCAGGCAACAAGTGGGTTTTCATCGAATAATCTTTTGGGGGAAGGTGGATTTGGTTGTGTGTATAAAGGCACCCTTGCAGATGGAAGAGACGTGGCTGTTAAACAACTTAAAGTGGGTGGTGGACAGGGAGAACGAGAGTTCAGAGCCGAAGTTGAGATTATTAGCCGAGTACACCATCGACATTTGGTTTCCCTGGTTGGTTACTGTATCTCTGATTATCAAAGATTGCTTGTCTACGATTATGTTTCAAACAATACCCTTCATTACCATCTACACGGGGAGAACAGGCCAGTTTTGGCTTGGGCTACACGTGTTCGGATTGCTGCTGGTGCAGCTCGTGGAATTGCTTACCTACATGAAGATTGTCATCCACGCATTATTCACAGGGATATTAAATCGTCTAACATTCTGCTTGATATCAACTTTGAAGCTCAGGTCGCAGATTTTGGGCTTGCTAAATTGGCACTGGATTCACATACTCATGTAACAACTCGTGTTATGGGAACCTTTGGATACATGGCCCCAGAGTACGCAACGAGTGGGAAATTGACAGATAAATCTGATGTTTTCTCTTTTGGGGTTGTACTTTTGGAGTTAATTACTGGTCGCAAGCCTGTGGATTCTTCTCAGCCTCTAGGGGATGAGAGCTTAGTTGAATGGGCTCGACCCTTACTTGCACAAGCCATTGAGGATGAGAATTTTGAAGAACTGGTGGATCCAAGGCTAGACAACAATTATGTAGACAGAGAAATGTTCCGGATGATCGAAGCAGCCGCTGCTTGTGTTCGTCATTCGGCAGTAAAGAGGCCAAGAATGAGTCAGGTGGTGAGAGCTCTAGACTCTTTAGATGAAATGTCAGATCTTGCAAATGGGGTGAAACCTGGGCAGAGTGGAGTGTTTGATTCAGCTGAACAATCTGCTCAGATTAGAATGTTTCAGAGAATGGCTTTTGGCAGTCAAGATTATAGTTACGGTTATTCCGAACGAGATCGCAGTCGAAGTTATAGTCAAAGTCATAGTAGCTGGAGTAGAGAATCCAGAGATCAAAGTCCCTCGGCGCCTATGAATCAATCCCGGCAATGGAACATCTGA 2337 48.05 MASPSPSISPPENPSDSSVSSPPSPSSPVESATSPSSPTSSEPNQTGEPPSSLSSSSAPPPQSPPAVPDAPPPSPPLSPPPLTASPPATPASPPPSPPAGSPPSPPQSSPSPPSPPPPSTPSSPPPPPPSTSTSPPPPSTTSPPPSSASPTPPERSTTSPPPQTSPPPPDLSPPPPPAAADGSPPPASNPRPPSSTPSPPPPDTISPSPPPPTNVPTPPSSTGESPKVSPPSHKASSPPSDSQSPPSDNSPPPRSTVPSPPSSVPSSSAPPPVSDPGSPTNSSGGTPVTPPTSVTPERPIATINGGTNVTANNSTTSKGGFSTGASVAVGSVVGVLVLSLVIMALWFVQKRKRRKRNIPYTMASPFSSQNSDSLFLRPHSSAPVVGSRTDSDFKYSSSEGGGVGNSRSFAYDDLHQATSGFSSNNLLGEGGFGCVYKGTLADGRDVAVKQLKVGGGQGEREFRAEVEIISRVHHRHLVSLVGYCISDYQRLLVYDYVSNNTLHYHLHGENRPVLAWATRVRIAAGAARGIAYLHEDCHPRIIHRDIKSSNILLDINFEAQVADFGLAKLALDSHTHVTTRVMGTFGYMAPEYATSGKLTDKSDVFSFGVVLLELITGRKPVDSSQPLGDESLVEWARPLLAQAIEDENFEELVDPRLDNNYVDREMFRMIEAAAACVRHSAVKRPRMSQVVRALDSLDEMSDLANGVKPGQSGVFDSAEQSAQIRMFQRMAFGSQDYSYGYSERDRSRSYSQSHSSWSRESRDQSPSAPMNQSRQWNI 778
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6039190 6045113 + CePI673135_11g005520.1 Cec11g0552 215764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g0552 778 ProSiteProfiles Protein kinase domain profile. 421 682 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g0552 778 FunFam proline-rich receptor-like protein kinase PERK8 497 709 - -
Cec11g0552 778 Pfam Protein tyrosine and serine/threonine kinase 424 694 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec11g0552 778 ProSitePatterns Serine/Threonine protein kinases active-site signature. 541 553 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec11g0552 778 SUPERFAMILY Protein kinase-like (PK-like) 404 694 IPR011009 -
Cec11g0552 778 CDD STKc_IRAK 427 697 - -
Cec11g0552 778 MobiDBLite consensus disorder prediction 278 313 - -
Cec11g0552 778 MobiDBLite consensus disorder prediction 12 53 - -
Cec11g0552 778 FunFam Proline-rich receptor-like protein kinase PERK8 394 496 - -
Cec11g0552 778 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 304 730 IPR047117 -
Cec11g0552 778 MobiDBLite consensus disorder prediction 54 225 - -
Cec11g0552 778 Gene3D Transferase(Phosphotransferase) domain 1 497 709 - -
Cec11g0552 778 SMART serkin_6 421 677 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g0552 778 MobiDBLite consensus disorder prediction 244 277 - -
Cec11g0552 778 MobiDBLite consensus disorder prediction 751 778 - -
Cec11g0552 778 ProSitePatterns Protein kinases ATP-binding region signature. 427 449 IPR017441 GO:0005524(InterPro)
Cec11g0552 778 MobiDBLite consensus disorder prediction 226 243 - -
Cec11g0552 778 Gene3D Phosphorylase Kinase; domain 1 392 496 - -
Cec11g0552 778 MobiDBLite consensus disorder prediction 740 778 - -
Cec11g0552 778 MobiDBLite consensus disorder prediction 1 313 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g2548 Cec-Chr5:36493057 Cec11g0552 Cec-Chr11:6039190 2.00E-147 dispersed
Cec06g0327 Cec-Chr6:3789801 Cec11g0552 Cec-Chr11:6039190 2.40E-65 dispersed
Cec06g1496 Cec-Chr6:28524751 Cec11g0552 Cec-Chr11:6039190 1.70E-76 dispersed
Cec09g2350 Cec-Chr9:40323737 Cec11g0552 Cec-Chr11:6039190 8.40E-79 dispersed
Cec10g2293 Cec-Chr10:37101359 Cec11g0552 Cec-Chr11:6039190 2.60E-70 dispersed
Cec11g0097 Cec-Chr11:1197317 Cec11g0552 Cec-Chr11:6039190 6.70E-73 dispersed
Cec11g0464 Cec-Chr11:4945963 Cec11g0552 Cec-Chr11:6039190 7.50E-122 dispersed
Cec11g0528 Cec-Chr11:5619330 Cec11g0552 Cec-Chr11:6039190 3.90E-73 dispersed
Cec11g1270 Cec-Chr11:26631269 Cec11g0552 Cec-Chr11:6039190 2.40E-69 dispersed
Cec11g1349 Cec-Chr11:27740528 Cec11g0552 Cec-Chr11:6039190 2.80E-65 dispersed
Cec05g2763 Cec-Chr5:38083316 Cec11g0552 Cec-Chr11:6039190 1.30E-139 transposed
Cec11g0552 Cec-Chr11:6039190 Cec11g1779 Cec-Chr11:31966794 1.10E-66 wgd
Cec11g0552 Cec-Chr11:6039190 Cec07g1741 Cec-Chr7:32960766 2.10E-58 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72393 PF07714 PK_Tyr_Ser-Thr 1.40E-45 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g0552 - - - 0.0