Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec11g0552 | ATGGCTTCACCTTCTCCAAGTATTTCTCCTCCTGAGAATCCATCAGATTCCTCAGTTTCTTCACCTCCTTCTCCTTCTTCTCCGGTGGAGTCTGCAACCTCTCCCTCGTCTCCCACATCTTCTGAGCCTAATCAGACTGGTGAACCTCCTTCATCACTTTCTAGTTCTTCAGCTCCACCTCCTCAGTCACCACCAGCTGTTCCTGATGCTCCTCCTCCTTCTCCTCCATTGTCTCCTCCTCCATTGACAGCATCACCACCTGCAACACCAGCATCCCCACCTCCTTCTCCCCCTGCTGGTTCACCACCTTCACCTCCCCAATCTTCGCCCTCGCCGCCATCACCTCCGCCACCTTCAACACCATCCTCCCCACCACCACCACCACCTTCAACATCAACCTCTCCACCACCACCTTCAACAACATCACCACCACCTTCCTCTGCATCACCAACTCCCCCAGAGAGATCAACTACCTCTCCTCCTCCTCAAACTTCACCTCCCCCTCCTGATTTATCACCTCCGCCGCCACCAGCAGCAGCAGATGGTTCTCCACCTCCTGCATCCAATCCTAGACCTCCATCTTCAACGCCCTCTCCCCCTCCCCCTGATACAATTTCACCTTCTCCACCTCCACCAACTAATGTCCCAACACCACCTTCATCAACAGGAGAATCACCTAAGGTATCTCCCCCATCCCACAAGGCTTCTTCTCCTCCTTCTGATTCTCAATCTCCACCTTCAGATAACTCCCCTCCACCAAGATCCACAGTACCATCACCTCCTTCTTCGGTTCCTTCATCGTCTGCTCCTCCTCCAGTTAGTGACCCTGGTTCTCCAACTAATTCTTCTGGTGGAACTCCTGTTACCCCTCCAACTTCTGTTACACCAGAACGACCAATTGCAACAATCAATGGTGGTACCAATGTTACAGCAAATAACTCAACCACTAGCAAGGGGGGTTTCAGCACTGGAGCATCTGTGGCAGTTGGCAGTGTGGTTGGTGTTCTAGTGCTGAGTCTTGTTATCATGGCTCTGTGGTTTGTTCAGAAACGGAAGAGAAGAAAGAGGAATATCCCTTACACCATGGCTTCTCCTTTTTCCTCGCAAAACTCAGATTCCCTTTTCCTAAGGCCCCATTCTTCAGCTCCTGTAGTAGGAAGTCGTACTGACAGTGATTTCAAGTATTCATCATCGGAAGGAGGTGGAGTAGGTAATTCCAGATCGTTTGCTTATGATGACCTACACCAGGCAACAAGTGGGTTTTCATCGAATAATCTTTTGGGGGAAGGTGGATTTGGTTGTGTGTATAAAGGCACCCTTGCAGATGGAAGAGACGTGGCTGTTAAACAACTTAAAGTGGGTGGTGGACAGGGAGAACGAGAGTTCAGAGCCGAAGTTGAGATTATTAGCCGAGTACACCATCGACATTTGGTTTCCCTGGTTGGTTACTGTATCTCTGATTATCAAAGATTGCTTGTCTACGATTATGTTTCAAACAATACCCTTCATTACCATCTACACGGGGAGAACAGGCCAGTTTTGGCTTGGGCTACACGTGTTCGGATTGCTGCTGGTGCAGCTCGTGGAATTGCTTACCTACATGAAGATTGTCATCCACGCATTATTCACAGGGATATTAAATCGTCTAACATTCTGCTTGATATCAACTTTGAAGCTCAGGTCGCAGATTTTGGGCTTGCTAAATTGGCACTGGATTCACATACTCATGTAACAACTCGTGTTATGGGAACCTTTGGATACATGGCCCCAGAGTACGCAACGAGTGGGAAATTGACAGATAAATCTGATGTTTTCTCTTTTGGGGTTGTACTTTTGGAGTTAATTACTGGTCGCAAGCCTGTGGATTCTTCTCAGCCTCTAGGGGATGAGAGCTTAGTTGAATGGGCTCGACCCTTACTTGCACAAGCCATTGAGGATGAGAATTTTGAAGAACTGGTGGATCCAAGGCTAGACAACAATTATGTAGACAGAGAAATGTTCCGGATGATCGAAGCAGCCGCTGCTTGTGTTCGTCATTCGGCAGTAAAGAGGCCAAGAATGAGTCAGGTGGTGAGAGCTCTAGACTCTTTAGATGAAATGTCAGATCTTGCAAATGGGGTGAAACCTGGGCAGAGTGGAGTGTTTGATTCAGCTGAACAATCTGCTCAGATTAGAATGTTTCAGAGAATGGCTTTTGGCAGTCAAGATTATAGTTACGGTTATTCCGAACGAGATCGCAGTCGAAGTTATAGTCAAAGTCATAGTAGCTGGAGTAGAGAATCCAGAGATCAAAGTCCCTCGGCGCCTATGAATCAATCCCGGCAATGGAACATCTGA | 2337 | 48.05 | MASPSPSISPPENPSDSSVSSPPSPSSPVESATSPSSPTSSEPNQTGEPPSSLSSSSAPPPQSPPAVPDAPPPSPPLSPPPLTASPPATPASPPPSPPAGSPPSPPQSSPSPPSPPPPSTPSSPPPPPPSTSTSPPPPSTTSPPPSSASPTPPERSTTSPPPQTSPPPPDLSPPPPPAAADGSPPPASNPRPPSSTPSPPPPDTISPSPPPPTNVPTPPSSTGESPKVSPPSHKASSPPSDSQSPPSDNSPPPRSTVPSPPSSVPSSSAPPPVSDPGSPTNSSGGTPVTPPTSVTPERPIATINGGTNVTANNSTTSKGGFSTGASVAVGSVVGVLVLSLVIMALWFVQKRKRRKRNIPYTMASPFSSQNSDSLFLRPHSSAPVVGSRTDSDFKYSSSEGGGVGNSRSFAYDDLHQATSGFSSNNLLGEGGFGCVYKGTLADGRDVAVKQLKVGGGQGEREFRAEVEIISRVHHRHLVSLVGYCISDYQRLLVYDYVSNNTLHYHLHGENRPVLAWATRVRIAAGAARGIAYLHEDCHPRIIHRDIKSSNILLDINFEAQVADFGLAKLALDSHTHVTTRVMGTFGYMAPEYATSGKLTDKSDVFSFGVVLLELITGRKPVDSSQPLGDESLVEWARPLLAQAIEDENFEELVDPRLDNNYVDREMFRMIEAAAACVRHSAVKRPRMSQVVRALDSLDEMSDLANGVKPGQSGVFDSAEQSAQIRMFQRMAFGSQDYSYGYSERDRSRSYSQSHSSWSRESRDQSPSAPMNQSRQWNI | 778 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 6039190 | 6045113 | + | CePI673135_11g005520.1 | Cec11g0552 | 215764 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec11g0552 | 778 | ProSiteProfiles | Protein kinase domain profile. | 421 | 682 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec11g0552 | 778 | FunFam | proline-rich receptor-like protein kinase PERK8 | 497 | 709 | - | - | |
Cec11g0552 | 778 | Pfam | Protein tyrosine and serine/threonine kinase | 424 | 694 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec11g0552 | 778 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 541 | 553 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec11g0552 | 778 | SUPERFAMILY | Protein kinase-like (PK-like) | 404 | 694 | IPR011009 | - | |
Cec11g0552 | 778 | CDD | STKc_IRAK | 427 | 697 | - | - | |
Cec11g0552 | 778 | MobiDBLite | consensus disorder prediction | 278 | 313 | - | - | |
Cec11g0552 | 778 | MobiDBLite | consensus disorder prediction | 12 | 53 | - | - | |
Cec11g0552 | 778 | FunFam | Proline-rich receptor-like protein kinase PERK8 | 394 | 496 | - | - | |
Cec11g0552 | 778 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 | 304 | 730 | IPR047117 | - | |
Cec11g0552 | 778 | MobiDBLite | consensus disorder prediction | 54 | 225 | - | - | |
Cec11g0552 | 778 | Gene3D | Transferase(Phosphotransferase) domain 1 | 497 | 709 | - | - | |
Cec11g0552 | 778 | SMART | serkin_6 | 421 | 677 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec11g0552 | 778 | MobiDBLite | consensus disorder prediction | 244 | 277 | - | - | |
Cec11g0552 | 778 | MobiDBLite | consensus disorder prediction | 751 | 778 | - | - | |
Cec11g0552 | 778 | ProSitePatterns | Protein kinases ATP-binding region signature. | 427 | 449 | IPR017441 | GO:0005524(InterPro) | |
Cec11g0552 | 778 | MobiDBLite | consensus disorder prediction | 226 | 243 | - | - | |
Cec11g0552 | 778 | Gene3D | Phosphorylase Kinase; domain 1 | 392 | 496 | - | - | |
Cec11g0552 | 778 | MobiDBLite | consensus disorder prediction | 740 | 778 | - | - | |
Cec11g0552 | 778 | MobiDBLite | consensus disorder prediction | 1 | 313 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec05g2548 | Cec-Chr5:36493057 | Cec11g0552 | Cec-Chr11:6039190 | 2.00E-147 | dispersed | |
Cec06g0327 | Cec-Chr6:3789801 | Cec11g0552 | Cec-Chr11:6039190 | 2.40E-65 | dispersed | |
Cec06g1496 | Cec-Chr6:28524751 | Cec11g0552 | Cec-Chr11:6039190 | 1.70E-76 | dispersed | |
Cec09g2350 | Cec-Chr9:40323737 | Cec11g0552 | Cec-Chr11:6039190 | 8.40E-79 | dispersed | |
Cec10g2293 | Cec-Chr10:37101359 | Cec11g0552 | Cec-Chr11:6039190 | 2.60E-70 | dispersed | |
Cec11g0097 | Cec-Chr11:1197317 | Cec11g0552 | Cec-Chr11:6039190 | 6.70E-73 | dispersed | |
Cec11g0464 | Cec-Chr11:4945963 | Cec11g0552 | Cec-Chr11:6039190 | 7.50E-122 | dispersed | |
Cec11g0528 | Cec-Chr11:5619330 | Cec11g0552 | Cec-Chr11:6039190 | 3.90E-73 | dispersed | |
Cec11g1270 | Cec-Chr11:26631269 | Cec11g0552 | Cec-Chr11:6039190 | 2.40E-69 | dispersed | |
Cec11g1349 | Cec-Chr11:27740528 | Cec11g0552 | Cec-Chr11:6039190 | 2.80E-65 | dispersed | |
Cec05g2763 | Cec-Chr5:38083316 | Cec11g0552 | Cec-Chr11:6039190 | 1.30E-139 | transposed | |
Cec11g0552 | Cec-Chr11:6039190 | Cec11g1779 | Cec-Chr11:31966794 | 1.10E-66 | wgd | |
Cec11g0552 | Cec-Chr11:6039190 | Cec07g1741 | Cec-Chr7:32960766 | 2.10E-58 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72393 | PF07714 | PK_Tyr_Ser-Thr | 1.40E-45 | CL0016 | Cec | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec11g0552 | - | - | - | 0.0 |