Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g0556 ATGGCGGTTCCCCTGGTTCAGTTCCCGATCTTCATGGCTGTCAGAGTCCTCGGGATGCTTGTGGCAGCTCTTCTGTTCATTTGGACTTTGCACTTCCGTGGAGGATTAGCACTTATCTCAGAAAACAAGGATCACATCTTCAATGTCCATCCTGTTCTTATGGTGATTGGACTTATTCTTCTTAATGGTGAAGCAATGTTAGCATACAAGACAGTTTCAGGAACCAAGAACTTTAGAAAACTAGTTCATCTTGCACTCCAATTTGTTGCATTCTTTTTAAGCCTGATTGGCATATGGGCTGCCCTGAAGTTCCACAATGACAAAGGAATCGACAACTTTTACAGTCTACATTCATGGTTGGGCTTAGTTTCTATCTTTCTGTTTGGCATCCAGTGGTCTGCAGGTTTTGTAAACTTTTGGTACCCAGGTGGCTCTAGAAACAGCAGAGCTACTCTGTTGCCATGGCACGTTTTCTTTGGCATTTACATATATGGCCTTTCAATTGCTACAACTGTTACTGGATTGTTAGAAAAAGCTACATTCCTTCAAACCAGCAAGGTAATATTGCGCTATTCGAATGAGGCCTTGCTGATAAATTCATTGGGTGTCCTCATTGTTCTCTTGGGTGGTCTCGTGATTCTGGCGGTTATCGCTCCGTCGAACGCCAAAGGTGATGTTAACAGAGGACTAGCAGAATAG 699 43.35 MAVPLVQFPIFMAVRVLGMLVAALLFIWTLHFRGGLALISENKDHIFNVHPVLMVIGLILLNGEAMLAYKTVSGTKNFRKLVHLALQFVAFFLSLIGIWAALKFHNDKGIDNFYSLHSWLGLVSIFLFGIQWSAGFVNFWYPGGSRNSRATLLPWHVFFGIYIYGLSIATTVTGLLEKATFLQTSKVILRYSNEALLINSLGVLIVLLGGLVILAVIAPSNAKGDVNRGLAE 232
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 6087148 6089245 + CePI673135_11g005560.1 Cec11g0556 215768
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cec11g0556 232 PANTHER CYTOCHROME B561-RELATED 1 221 IPR043205 GO:0016491(PANTHER)|GO:0016491(InterPro)
Cec11g0556 232 Pfam Eukaryotic cytochrome b561 49 181 IPR006593 -
Cec11g0556 232 Gene3D - 2 229 - -
Cec11g0556 232 ProSiteProfiles Cytochrome b561 domain profile. 13 217 IPR006593 -
Cec11g0556 232 FunFam Cytochrome b reductase 1 4 225 - -
Cec11g0556 232 SMART 561_7 49 175 IPR006593 -
Cec11g0556 232 CDD Cyt_b561_ACYB-1_like 40 183 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec09g1347 Cec-Chr9:16962880 Cec11g0556 Cec-Chr11:6087148 4.50E-53 dispersed
Cec11g0556 Cec-Chr11:6087148 Cec05g2535 Cec-Chr5:36360908 3.80E-44 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g0556 K08360 - csv:101212633 413.69