Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g0586 ATGGCGGTCGCTTTCCATGATGTCAAGTCTGCAGCCGGTTTGAAAAAACTCGATGAATACTTGCTTAGTCGTAGCTACATTTCCGGGTATCAGCCTTCAAAGGATGATGTTACCGTTTATGAAGCGATCTCCAAACCCGTTTCCAGTGAATATGTTAACGTGTCTAGGTGGAGTAATCACATTGAAGCACTCTTGAGAGTTTCCGCTGTTTTTGGAGAGGGTTCTGGTGTTAAGTTCGATGCGGCTGCAACCCCACCAGCTGCAGATGCAAAGGCTGCCGATGACGATGACGATGATGACATGGACCTATTTGGTGAAGAGACTGAAGAGGAAAAGAAGGCTGCTGAAGAGCGTGCAGCTGCCATTAAGGCTTCTGCAAAGAAGAAAGAGAGTGGCAAATCATCAGTTCTGATGGACATCAAACCTTGGGATGACGAAACTGACATGAAGAAACTTGAAGAGGCTGTAAGAAGCGTTCAGATGGAAGGCTTGCTTTGGGGAGCATCGAAACTCGTCCCTGTTGGATATGGTATTAAGAAATTGCAGATAATGCTCACAATTGTTGATGACCTTGTAGCTGTGACATCGTGGCCTTCAACAAAATATAATTTCTGTTCGTCAGAACCAAAGGCACCTGGTTTCAAAGATGTTGCTGAGTCTGAGGAAGATGTTTAG 675 45.19 MAVAFHDVKSAAGLKKLDEYLLSRSYISGYQPSKDDVTVYEAISKPVSSEYVNVSRWSNHIEALLRVSAVFGEGSGVKFDAAATPPAADAKAADDDDDDDMDLFGEETEEEKKAAEERAAAIKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVAVTSWPSTKYNFCSSEPKAPGFKDVAESEEDV 224
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6443872 6445647 + CePI673135_11g005860.1 Cec11g0586 215798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g0586 224 FunFam Elongation factor 1-delta 1 3 78 - -
Cec11g0586 224 MobiDBLite consensus disorder prediction 82 110 - -
Cec11g0586 224 FunFam Elongation factor 1-beta 1 like 127 204 - -
Cec11g0586 224 SMART EF1_GNE_2 133 223 IPR014038 GO:0003746(InterPro)|GO:0006414(InterPro)
Cec11g0586 224 Pfam EF-1 guanine nucleotide exchange domain 135 194 IPR014038 GO:0003746(InterPro)|GO:0006414(InterPro)
Cec11g0586 224 Gene3D - 126 208 IPR014717 -
Cec11g0586 224 Gene3D - 3 75 - -
Cec11g0586 224 CDD EF1B 131 192 IPR014038 GO:0003746(InterPro)|GO:0006414(InterPro)
Cec11g0586 224 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 1. 97 105 IPR001326 GO:0003746(InterPro)|GO:0006414(InterPro)
Cec11g0586 224 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 1 194 IPR049720 GO:0003746(InterPro)|GO:0005085(PANTHER)|GO:0005829(PANTHER)|GO:0005853(InterPro)|GO:0006414(PANTHER)
Cec11g0586 224 Coils Coil 105 125 - -
Cec11g0586 224 SUPERFAMILY eEF-1beta-like 130 195 IPR036219 -
Cec11g0586 224 MobiDBLite consensus disorder prediction 92 106 - -
Cec11g0586 224 SUPERFAMILY GST C-terminal domain-like 9 69 IPR036282 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g0586 K03232 - csv:101215827 286.574