Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g0592 ATGAAAAGGCTACTGGGGTTGTTCTTCTTGTTCGTTGTGGTTCCAGTGTTGGTGAGATCTCTGAACCCACCTCTGAACGACGACGTTTTGGGGCTGATTGTGTTCAAGGCTGACATTGAAGATCCTAAAGGGAAACTTGCTTCGTGGAATGAAGATGACGATAACCCATGTAATTGGGTTGGTGTAAAATGCAACCCCAGATCCAATAGAGTTGTTGAGCTCAATCTTGATGGCTTTTCTCTCAATGGCAGGCTTGGCCGTGGTCTTCTTCAGTTGCAGTTTCTTCGTAAACTCTCTCTTTCGAACAATAATCTTACTGGAAATTTAAGTCCTAATAATGCTCGCTTTGAAAATCTTCGAGTGGTCGATTTAAGCGGCAACGGTTTTCATGGGATGATTCCGGATGATTTCTTCCGGCAATGTGGGTCGCTGAGAGTAATCTCTTTGGCTAAGAACAAATTTTCAGGGAAAATCCCGGAAAGTTTGGGCTCTTGTTCCAGTCTTGCTGCTGTTAATTTGTCTTCTAATCAGTTTTCAGGTTCATTGCCTTCTGGGATTTGGTCCTTGACCGGGCTTCGATCTTTGGATTTGTCTGATAATGTGTTAGAAGGTGAAATTCCACCGGAAGTGAAGGGTATGAATAATTTGCGAGCTATTAATTTGGGGAAGAATCGGTTTTCTGGACAGATCCCCGATGGGATTGGGAGTTGTTTGCTCTTGAGGTCTGTTGATCTCAGTGAGAATTCTTTCTCTGGCGACGTTCCGGCGACAATGCAGAAGCTTAGTTTATGCAGTACTCTTAATTTAAGAAGAAACTCATTTGAAGGGAAGGTTCCTGAATGGATTGGTGGAATGGATGGCCTTGAAATCTTGGACCTTTCTGGGAATAGATTTTCTGGTCCGGTTCCAAGTTCATTTGGGAATCTTCAAAAACTGAAGGTTTTGAATTTTTCTGAAAATGGTTTAACTGGTAGCTTGGCTGAATCCATACTTCCTTCTCAAAACCTTTCAGCCATGGAGCCCGGCCGTGGTTCTCTCACTGGTGTTCTTCCGGCCTGGATTCTGAAGCTGGGTTCGCAAAATGTATTGCCTTCTGATATCAAAAGAAGCTCTCTTTCTACAACTGTGGGAAAAGCTCTTGTTAATCTTCAAGTTTTAGATTTGTCTCACAATGCAATTTCTGGTGAAATTTCACCTGATATTGGGATATTAAGTAACTTGCAGGTGTTAAACCTGTGTAAGAACTCATTTGTTGGGACTGTTCCAGAGAGTATTGGAGGCTTGAAGGCCTTGGTTTTTCTTGACTTGAGTGAGAACCAGTTGAATGGGACCATTCCCGAAACACTCGGCGGAGACATATCATTGAAAGAAGTGAGACTGGAGAAGAACTTGCTGGAGGGTGAAGTTCCAAAATCAATTGGGAACTGTTCTTCACTTGTAACTTTGGACATATCAGAAAACAGATTAACTGGCTCCATACCAGCAGAATTGTCTCAACTGATCAATCTTCAAATTGTGGACTTGTCAACAAACAATCTCAGTGGTGCACTGCCAAAACAGTTGGCCAATCTTCCTAACCTTCTTTTGTTTAACATTTCTCACAACAATCTGCAAGGCGAACTGCCTGCAGGTGGCTTTTTCAATACAATCTCTCCTTCCTCTGTGGCTGGAAATCCTTCCATTTGTGGTTCTATTGTCAAGAAGTCTTGCCCTGGCGTCCTTCCAAAGCCTATTGTTCTCAATCCCAACTCATCTTCTGACTCTGGTTCTCCTTCATTACCTTCAACTCTTGGTCACAAAAGAATCATCCTCAGCATCTCTGCACTCATTGCTATTGGTGCAGCTGCTGTTATCCTCGTCGGTGTAGTTGCAATCACCGTCATTAACCTCCATGTTCGATCGTCTGCAAATCGTCCTGAAGCAGCCATCACGTTCTCAGGAGGGGATGACTTCAGCCACTCCCCAACTACGGATGCTAATTCTGGCAAGCTCGTCATGTTCTCGGGAGAGCCTGACTTTAGTACCGGTGCACATGCCCTCCTTAACAAGGATTGCGAGCTTGGCCGTGGGGGATTTGGAGCGGTTTACCAGACTGTTCTTCGTGATGGGCATCCGGTTGCAATAAAAAAGCTCACCGTTTCAAGTCTTGTCAAATCTCGAGAAGAGTTTGAAAGGGAGGTTAAGAAGTTGGGGAAGGTTAGGCACCAAAATCTTGTGGCTCTAGAAGGTTATTACTGGACACCATCTCTACAGCTCCTCATATATGAATTTGTTTCTGGAGGGAGTTTGTATAAACAGCTTCATGAAGGATTGGGTGGAAACATCCTCTCATGGAATGAAAGGTTCAACATAATCCTTGGAACTGCGAAAAGCTTGGCACATTTGCACCAAATGAACATCATCCACTACAATATAAAATCAAGCAATGTCCTGATTGATAGTTCAGGCGAACCTAAAGTTGGAGATTTTGGCCTAGCAAGATTGTTACCAATGCTTGATCGGTACGTGTTGAGCAGCAAGATACAGAGCGCACTCGGATACATGGCACCCGAGTTTGCCTGCAAAACAGTTAAGATAACAGAGAAATGTGATGTGTATGGGTTTGGAGTTCTGGTTCTTGAGGTGGTAACTGGGAAGAGACCTGTAGAGTACATGGAAGACGATGTGGTGGTACTCTGCGACATGGTTCGACGGGCGCTGGAAGAAGGTCGGGTAGAGGAATGCATTGATGGGAGGCTCCAGAGGAATTTTCCATCAGAGGAGGCCATACCAGTAGTGAAACTAGGCTTGATTTGCACTTCTCAGGTGCCATCAAACCGACCTGATATGGCAGAGGTTGTTAATATATTAGAGCTTATCAGATGTCCATCAGAAGGCCAAGAAGAATTGGGATAA 2895 44.15 MKRLLGLFFLFVVVPVLVRSLNPPLNDDVLGLIVFKADIEDPKGKLASWNEDDDNPCNWVGVKCNPRSNRVVELNLDGFSLNGRLGRGLLQLQFLRKLSLSNNNLTGNLSPNNARFENLRVVDLSGNGFHGMIPDDFFRQCGSLRVISLAKNKFSGKIPESLGSCSSLAAVNLSSNQFSGSLPSGIWSLTGLRSLDLSDNVLEGEIPPEVKGMNNLRAINLGKNRFSGQIPDGIGSCLLLRSVDLSENSFSGDVPATMQKLSLCSTLNLRRNSFEGKVPEWIGGMDGLEILDLSGNRFSGPVPSSFGNLQKLKVLNFSENGLTGSLAESILPSQNLSAMEPGRGSLTGVLPAWILKLGSQNVLPSDIKRSSLSTTVGKALVNLQVLDLSHNAISGEISPDIGILSNLQVLNLCKNSFVGTVPESIGGLKALVFLDLSENQLNGTIPETLGGDISLKEVRLEKNLLEGEVPKSIGNCSSLVTLDISENRLTGSIPAELSQLINLQIVDLSTNNLSGALPKQLANLPNLLLFNISHNNLQGELPAGGFFNTISPSSVAGNPSICGSIVKKSCPGVLPKPIVLNPNSSSDSGSPSLPSTLGHKRIILSISALIAIGAAAVILVGVVAITVINLHVRSSANRPEAAITFSGGDDFSHSPTTDANSGKLVMFSGEPDFSTGAHALLNKDCELGRGGFGAVYQTVLRDGHPVAIKKLTVSSLVKSREEFEREVKKLGKVRHQNLVALEGYYWTPSLQLLIYEFVSGGSLYKQLHEGLGGNILSWNERFNIILGTAKSLAHLHQMNIIHYNIKSSNVLIDSSGEPKVGDFGLARLLPMLDRYVLSSKIQSALGYMAPEFACKTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRRALEEGRVEECIDGRLQRNFPSEEAIPVVKLGLICTSQVPSNRPDMAEVVNILELIRCPSEGQEELG 964
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6499016 6502131 + CePI673135_11g005920.1 Cec11g0592 215804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g0592 964 Pfam Leucine rich repeat 382 441 IPR001611 GO:0005515(InterPro)
Cec11g0592 964 Pfam Leucine rich repeat 240 298 IPR001611 GO:0005515(InterPro)
Cec11g0592 964 Pfam Leucine rich repeat 118 178 IPR001611 GO:0005515(InterPro)
Cec11g0592 964 SUPERFAMILY RNI-like 267 548 - -
Cec11g0592 964 ProSiteProfiles Protein kinase domain profile. 681 953 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g0592 964 SMART LRR_typ_2 428 452 IPR003591 -
Cec11g0592 964 SMART LRR_typ_2 213 237 IPR003591 -
Cec11g0592 964 SMART LRR_typ_2 500 523 IPR003591 -
Cec11g0592 964 SMART LRR_typ_2 189 212 IPR003591 -
Cec11g0592 964 SMART LRR_typ_2 285 308 IPR003591 -
Cec11g0592 964 SMART LRR_typ_2 116 140 IPR003591 -
Cec11g0592 964 SMART LRR_typ_2 309 333 IPR003591 -
Cec11g0592 964 SMART LRR_typ_2 524 548 IPR003591 -
Cec11g0592 964 SMART LRR_typ_2 380 404 IPR003591 -
Cec11g0592 964 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 26 304 - -
Cec11g0592 964 Gene3D Ribonuclease Inhibitor 26 182 IPR032675 -
Cec11g0592 964 Pfam Leucine Rich Repeat 192 212 IPR001611 GO:0005515(InterPro)
Cec11g0592 964 Pfam Leucine Rich Repeat 215 237 IPR001611 GO:0005515(InterPro)
Cec11g0592 964 Pfam Leucine Rich Repeat 502 524 IPR001611 GO:0005515(InterPro)
Cec11g0592 964 Pfam Leucine Rich Repeat 478 500 IPR001611 GO:0005515(InterPro)
Cec11g0592 964 Pfam Leucine Rich Repeat 95 111 IPR001611 GO:0005515(InterPro)
Cec11g0592 964 ProSitePatterns Protein kinases ATP-binding region signature. 687 710 IPR017441 GO:0005524(InterPro)
Cec11g0592 964 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 758 959 - -
Cec11g0592 964 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 279 953 IPR051564 GO:0016020(PANTHER)
Cec11g0592 964 Pfam Leucine rich repeat N-terminal domain 25 65 IPR013210 -
Cec11g0592 964 SUPERFAMILY L domain-like 44 355 - -
Cec11g0592 964 Gene3D Ribonuclease Inhibitor 286 573 IPR032675 -
Cec11g0592 964 ProSiteProfiles Leucine-rich repeat profile. 382 404 IPR001611 GO:0005515(InterPro)
Cec11g0592 964 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 675 757 - -
Cec11g0592 964 Pfam Protein tyrosine and serine/threonine kinase 683 949 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec11g0592 964 SUPERFAMILY Protein kinase-like (PK-like) 684 954 IPR011009 -
Cec11g0592 964 CDD STKc_IRAK 687 953 - -
Cec11g0592 964 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 305 574 - -
Cec11g0592 964 Gene3D Phosphorylase Kinase; domain 1 674 757 - -
Cec11g0592 964 Gene3D Ribonuclease Inhibitor 183 281 IPR032675 -
Cec11g0592 964 Gene3D Transferase(Phosphotransferase) domain 1 758 962 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec11g0592 Cec-Chr11:6499016 Cec05g0161 Cec-Chr5:1373772 1.50E-49 dispersed
Cec10g0341 Cec-Chr10:4089807 Cec11g0592 Cec-Chr11:6499016 4.10E-86 transposed
Cec07g1694 Cec-Chr7:32530773 Cec11g0592 Cec-Chr11:6499016 8.10E-30 transposed
Cec10g2282 Cec-Chr10:36997328 Cec11g0592 Cec-Chr11:6499016 5.20E-185 wgd
Cec11g0592 Cec-Chr11:6499016 Cec07g0576 Cec-Chr7:7295543 7.90E-192 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72394 PF07714 PK_Tyr_Ser-Thr 4.70E-41 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g0592 - - - 0.0