Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec11g0606 | ATGTCAAGAGAAAGCAGAGAATTGCAACAGGTCGATGAGACCGGGAAGAAAATAAAGAGGGAAATTGATCAAAGTTTTTATGATCCATTAATGGGAAGAAGACATATTTTAAGTCCAAGTACTGGGACGACATTGAATACAATAACGCCATGTGCAGCTTGTAAGCTTTTAAGAAGAAGATGTGCTCAAGAATGTCCATTTTCTCCATATTTTTCTCCACATGAACCCCAAAAATTTGCTTCGGTTCATAAGGTTTTTGGTGCAAGCAACGTGGCTAAGATGCTAATGGAGGTACCGGAGAGTCAAAGAGCGGACGCAGCAAACAGCCTTGTTTATGAAGCAAATCTAAGGCTAAGAGATCCTGTGTATGGTTGCATGGGAGTCATTTCTGCTCTCCAACACCAACTTCATACTTTACAATCTGACCTCAATTCCATCAGAACTCAGATTTTCAACTTCAAATTTACACAACATAATAATTCACACATTCCTAATTTCATTTCCGCCGCCGCTGCAACCCCGCCTGCAGCCCCGCCGACTCCGCCACATTCTCAGCCGCCTCCCCTCTCTCTTCCGCCCCCTCTTCCTTCCTCCTCTTCCATCTTTTCATCTCCTATTATCACTACTACTACTGCTGCCCCTGAATTAATTAACCCCATCTCAACAACTCAACATATTTCCTACTTTGGTTAA | 693 | 42.86 | MSRESRELQQVDETGKKIKREIDQSFYDPLMGRRHILSPSTGTTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVAKMLMEVPESQRADAANSLVYEANLRLRDPVYGCMGVISALQHQLHTLQSDLNSIRTQIFNFKFTQHNNSHIPNFISAAAATPPAAPPTPPHSQPPPLSLPPPLPSSSSIFSSPIITTTTAAPELINPISTTQHISYFG | 230 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 6664733 | 6667199 | + | CePI673135_11g006060.1 | Cec11g0606 | 215818 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec11g0606 | 230 | ProSiteProfiles | LOB domain profile. | 49 | 150 | IPR004883 | - | |
Cec11g0606 | 230 | Pfam | Lateral organ boundaries (LOB) domain | 50 | 146 | IPR004883 | - | |
Cec11g0606 | 230 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 48 | 175 | - | - | |
Cec11g0606 | 230 | MobiDBLite | consensus disorder prediction | 171 | 195 | - | - | |
Cec11g0606 | 230 | MobiDBLite | consensus disorder prediction | 174 | 195 | - | - | |
Cec11g0606 | 230 | Coils | Coil | 129 | 149 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec09g2144 | Cec-Chr9:38382852 | Cec11g0606 | Cec-Chr11:6664733 | 2.40E-27 | dispersed | |
Cec10g1403 | Cec-Chr10:28374804 | Cec11g0606 | Cec-Chr11:6664733 | 2.80E-32 | dispersed | |
Cec11g0606 | Cec-Chr11:6664733 | Cec11g1157 | Cec-Chr11:23600517 | 7.20E-35 | dispersed | |
Cec11g0606 | Cec-Chr11:6664733 | Cec07g0553 | Cec-Chr7:6641470 | 5.30E-54 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
30513 | PF03195 | LOB | 1.90E-40 | No_clan | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec11g0606 | - | - | - | 0.0 |