Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g0629 ATGAGAGGTTGGCATGAGACTCGTTCTTCTTCTTCTTGTGCAGCCTGCAAATTGCTGAAAAGAAGATGCATTCCCACTTGTATATTTGCTCCTTATTTTAGGTCTGATGAGCCAAAGAAATTTGCCAAAGTTCATAAGGTTTTTGGGGCAAGTAATGTGAGTAAAATTCTGACTGAGGTTCCTGAGGAGCAGAGAGAAGACACTGTCAATTCTTTGGCTTATGAAGCTGAGGCCAGGCTGAGGGATCCTGTTTATGGCTGCATCGGCGCCATAGCTTTGTTGCAAACAAAAATGGTGGAGCTTCAACATGATCTTGCCCTTGCCAAAGCTCGTCTTGCTCGTTATGCTAATACTTCTTCTTCTTCTTCTTCTTTAGAAAATTGTGTTGTTAATATGTCTTATGGTGGATTCAGTATCTCTTCAGGCCAGAGCTCTTCTGATATCACCCAATATGGATATTTATGTGACTTCTCTCATTTTCCTTGTCCATTTAAAGCTTGA 501 41.12 MRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYANTSSSSSSLENCVVNMSYGGFSISSGQSSSDITQYGYLCDFSHFPCPFKA 166
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6922287 6922787 + CePI673135_11g006290.1 Cec11g0629 215841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g0629 166 ProSiteProfiles LOB domain profile. 11 112 IPR004883 -
Cec11g0629 166 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 11 120 - -
Cec11g0629 166 Pfam Lateral organ boundaries (LOB) domain 12 109 IPR004883 -
Cec11g0629 166 Coils Coil 91 118 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec11g0629 Cec-Chr11:6922287 Cec11g1157 Cec-Chr11:23600517 1.90E-37 dispersed
Cec11g0629 Cec-Chr11:6922287 Cec10g1403 Cec-Chr10:28374804 5.00E-38 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30515 PF03195 LOB 1.20E-38 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g0629 - - - 0.0