Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g0642 ATGCCCTCAGAAATGACAAGCTATTATGATATTGATGACATTCTAGCAGAGGAAGAGCTTGTCTCAGTTGTGTTCCAAAAGGCAGTTACTGGAGTTGGAATTGATCCCAGTTCTGAAACAGATTCTGTTGAATCTGGATCCAAAGTAGAGCTACCCTTCTGGCTTGCACAAGAGCTGCATCTTAGACAAGTGGCGGTTATGGGCTTACCTTCCTGTTTTAACCAAAGAACACGGCTGGAAATTCAGGCTGATGCTGCATTTGTTGATCTACGATCTAGATGCCCATTCTTCTATGAATTTGGATGCAAGATTGCACCTCTGGTTGGCGATAGAACGATTGGTTCTTGGCTTTTTTCAACGTTCAAGAGTAGGTACAAGGAAGTTCTTACCAAGGCTCACACTGCAGTATTTGCTGCAAGTTCTAAATATTTGGCACTTCTGTCAAAAGAAGAAACCAAGATGTATGAAGCAGCTCAATCCTCTATGACAGCCTTCAAAAAATGGCGAATGGGTGGGCCTAGATTCCAGAAAGCATCCTTTCTAAGCAGGAAGAGGAAGTCATCTGAGTAG 570 42.98 MPSEMTSYYDIDDILAEEELVSVVFQKAVTGVGIDPSSETDSVESGSKVELPFWLAQELHLRQVAVMGLPSCFNQRTRLEIQADAAFVDLRSRCPFFYEFGCKIAPLVGDRTIGSWLFSTFKSRYKEVLTKAHTAVFAASSKYLALLSKEETKMYEAAQSSMTAFKKWRMGGPRFQKASFLSRKRKSSE 189
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7052236 7054625 - CePI673135_11g006420.1 Cec11g0642 215854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g0642 189 Gene3D - 2 171 IPR038437 -
Cec11g0642 189 SUPERFAMILY GINS helical bundle-like 69 170 IPR036224 -
Cec11g0642 189 CDD GINS_A_psf3 69 171 - -
Cec11g0642 189 PANTHER UNCHARACTERIZED 5 187 IPR010492 GO:0000811(PANTHER)|GO:1902975(PANTHER)
Cec11g0642 189 Pfam GINS/PriA/YqbF domain 9 59 - -
Cec11g0642 189 Pfam GINS complex protein helical bundle domain 70 169 IPR021151 -
Cec11g0642 189 SUPERFAMILY PriA/YqbF domain 3 70 - -
Cec11g0642 189 CDD GINS_B_Psf3 8 70 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g0642 K10734 - csv:101203869 356.295