Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g0696 ATGGCGGATAGATGTTGGGGTGGAATTGGGAATCTTGCACACACAGAACAAGAACATGGTACTAAGAATGAAGATGAGGATGGAATTAAAACCAAGAGACGGCCACGAGGGAGACCACCAGGCTCAAAAAACAAGCCAAAGCCACCCATTGTTATCACTAAACACACTCCCAATGCCTTTCAAACCCACGTTTTCGAAATCACCACCGCCACCGACATTGCCCACTCCATTTCCACTTTCGCCCACCGCCGCCACCGTGGGGTTTCCATTCTCAGCGCCACCGGCCTCGTCGCTGACGTCACTCTCCGACAACCCCCCGGCGTCATTACCCTCCACGAACGCTTCGAGATTTTATCTCTCTCTGGCGCTTTCCTCCCCACACCCTCCCCCCACGGGGCTACCGCCTTGACCGTCTATCTCGCCGGCGGCCAAGGCCGGGTCGTTGGAGGCCTCGTCGCCGGTCCCCTCATCGCCGCTGGCCCCGTCATTGTAGTTGCAGCTTCATTTACCAACGCTATGTATGAAAAATTACCGATTGAAGAAGATGAAGAGAATGCAGAGGAGAAGAAATTAGAAGAAGAAAATATTAATGGAAATAATTCAGTGGGAGAATCATCATCAGTAGCAGCAGCAGCAACAACTTCTTTGCCAGTTTATAATTTGATTCCTAATACTCAAATTTCACAAGAAATGTTTTGGGCTCCTCTTCCTCTTCCTCCTCCATCTTATTAA 732 50.14 MADRCWGGIGNLAHTEQEHGTKNEDEDGIKTKRRPRGRPPGSKNKPKPPIVITKHTPNAFQTHVFEITTATDIAHSISTFAHRRHRGVSILSATGLVADVTLRQPPGVITLHERFEILSLSGAFLPTPSPHGATALTVYLAGGQGRVVGGLVAGPLIAAGPVIVVAASFTNAMYEKLPIEEDEENAEEKKLEEENINGNNSVGESSSVAAAATTSLPVYNLIPNTQISQEMFWAPLPLPPPSY 243
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7692374 7693105 + CePI673135_11g006960.1 Cec11g0696 215908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g0696 243 MobiDBLite consensus disorder prediction 1 53 - -
Cec11g0696 243 Gene3D - 61 190 - -
Cec11g0696 243 Coils Coil 179 199 - -
Cec11g0696 243 PIRSF ESCAROLA 9 234 IPR014476 GO:0003680(InterPro)
Cec11g0696 243 CDD DUF296 61 169 IPR005175 -
Cec11g0696 243 ProSiteProfiles PPC domain profile profile. 57 192 IPR005175 -
Cec11g0696 243 SUPERFAMILY AF0104/ALDC/Ptd012-like 57 183 - -
Cec11g0696 243 MobiDBLite consensus disorder prediction 180 204 - -
Cec11g0696 243 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 17 234 IPR014476 GO:0003680(InterPro)|GO:0003680(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)
Cec11g0696 243 MobiDBLite consensus disorder prediction 17 34 - -
Cec11g0696 243 Pfam Plants and Prokaryotes Conserved (PCC) domain 61 170 IPR005175 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec09g1211 Cec-Chr9:12651514 Cec11g0696 Cec-Chr11:7692374 3.20E-50 dispersed
Cec10g0179 Cec-Chr10:1756956 Cec11g0696 Cec-Chr11:7692374 3.70E-48 dispersed
Cec11g0696 Cec-Chr11:7692374 Cec11g1507 Cec-Chr11:29283205 3.50E-32 dispersed
Cec11g0696 Cec-Chr11:7692374 Cec07g0387 Cec-Chr7:3952144 7.80E-56 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g0696 - - - 0.0