Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g0786 ATGGCTAAGTCACCGGAAAATTTATTGCCTAAAAATACATGTTTGGCCCTGTTTTGCTTGTTCCCAATTCATTTTACTCTTATGATTGGTCAACAGAGTATGAGCTCTTCATCAACTCAACTCTGTGCTTCAAGGATGGGCATCTATGAGCCATTTCACCAGATCAACTCATGGGCAAATGCATTCGGTAGTCGACTAGATACGAGCATATCACCTATTATAAAAGTGGATGGCCGTGTAGACATTAAACCCGAGTTTGTTCCTTTTGAATCAATGGATCATCTCGAGAGCAGTCAAGAAATGAACAAGCCAATCGATGATAAGGTACAAAGACGTTTAGCCCAAAATCGGGAAGCAGCTCGTAAAAGCCGTATGAGGAAAAAGGTTTATGTGCAGCAGTTAGAAACTAGCCGTTTGAAGCTGCGACTGTTGGAGCAGGAGCTAGAAAGAACTAAGCAACAGAAGGGTACCAGCTGCTTAGTAGATACCAGCCACTTCGGATTCAGCGGATTTGTAAACCCAGGGATTGCTGCATTTGAGATGGAATACAATCACTGGGTTGAAGAGCAACAGAGACAGATTACCGAACTCAGAAAGGCGTTGCAAGTTCATACAACTGATATAGAACTCCAAATTTTAGTGGAGAGCAGCCTAAACCATTACCACAATCTGTTTTGCATGAAAGCCAATGCTGCGAAGGCTGATGTTTTCTATATAATGTCTGGTGTTTGGAGAACATCGGCAGAGCGTTTTTTCCACTGGATAGGAGGATTTCGCCCATCAGAGCTGCTAAACGTTCTGAAGCCATACTTTGAGCCATTAAATGAACAACAAAGAGCCGATATCCACAAGTTGCAACAGTCGTCTCGGCAAGCTGAAGATGCGCTCACACAGGGAATGGAAAAACTGCACCAGAATCTATCCCTCAGCATTGCCAGTGATCCTATAGGAAGCTATATTTCTCAGATGGGTGATGGAATGGAGAATCTAGAAGCACTGGAGAGCTTCGTAAGCCAGGCAGACCATCTCAGGCAACAAACTTTGAAGAGAATGTCTCACATCCTAACCACCAAACAGGCAGCACAAGGCTTGCTCGCTTTGGGCGAGTACTTCCACCGTCTCCGCATCCTCAGTTCGCTCTGGGCTACTCGACCTTGTGAACCTGCCTAG 1170 44.87 MAKSPENLLPKNTCLALFCLFPIHFTLMIGQQSMSSSSTQLCASRMGIYEPFHQINSWANAFGSRLDTSISPIIKVDGRVDIKPEFVPFESMDHLESSQEMNKPIDDKVQRRLAQNREAARKSRMRKKVYVQQLETSRLKLRLLEQELERTKQQKGTSCLVDTSHFGFSGFVNPGIAAFEMEYNHWVEEQQRQITELRKALQVHTTDIELQILVESSLNHYHNLFCMKANAAKADVFYIMSGVWRTSAERFFHWIGGFRPSELLNVLKPYFEPLNEQQRADIHKLQQSSRQAEDALTQGMEKLHQNLSLSIASDPIGSYISQMGDGMENLEALESFVSQADHLRQQTLKRMSHILTTKQAAQGLLALGEYFHRLRILSSLWATRPCEPA 389
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9252329 9256498 + CePI673135_11g007860.1 Cec11g0786 215998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g0786 389 Coils Coil 275 295 - -
Cec11g0786 389 Gene3D - 107 159 - -
Cec11g0786 389 FunFam BZIP family transcription factor 107 157 - -
Cec11g0786 389 Coils Coil 187 207 - -
Cec11g0786 389 Pfam Seed dormancy control 193 268 IPR025422 GO:0006351(InterPro)|GO:0043565(InterPro)
Cec11g0786 389 Coils Coil 134 154 - -
Cec11g0786 389 SMART brlzneu 104 157 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec11g0786 389 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 106 150 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec11g0786 389 PANTHER TRANSCRIPTION FACTOR TGA9 34 388 - -
Cec11g0786 389 SUPERFAMILY Leucine zipper domain 108 149 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec11g0786 389 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 111 126 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec11g0786 389 ProSiteProfiles DOG1 domain profile. 176 384 IPR025422 GO:0006351(InterPro)|GO:0043565(InterPro)
Cec11g0786 389 Pfam bZIP transcription factor 107 138 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec07g1028 Cec-Chr7:24978782 Cec11g0786 Cec-Chr11:9252329 3.20E-98 dispersed
Cec10g1751 Cec-Chr10:32194494 Cec11g0786 Cec-Chr11:9252329 6.10E-66 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30525 PF14144 DOG1 2.50E-28 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g0786 K14431 - csv:101217648 645.58