Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g0896 ATGGGGCTATTGATAAGTTGCTCTTGGTTCTACATCGGCTTCAAGAGATGGAAGCTCATAAAACTCAGAGAATATTTCTTCCGACAAAATGGAGGATTAATGTTTGAGCAACAACTTTCCATCCGAGACGACGCCGCACAAACCGCTAAACTTTTCACAGCTGAGGAATTACGGAAAGCCACTAACAACTACTCTGACGACCGAATCGTCGGCAAAGGCGGCTTCGGAACAGTCTACAAAGGCATCCTCCCTACCGGCGCCGCCGTCGCCATCAAGAAATCCAAGATCGTCGATAAAACTCAGAACAAACAGTTCATCAACGAAGTCATTGTCCTCTCACAGATCAATCATCGAAACACAGTCAAACTCTTAGGCTGTTGCTTGGAAGAAGAAGTTCCTCTTCTCGTCTACGAATTCGTCTCCAATGGCACGCTCTTCGATCACATTCACAAGAGAAAATCACAGCGCTCTATTCCTTGGAAGAACCGCCTCAAAATCGCATCCGAAACCGCCGGAGTCCTCTCCTATCTTCACTCCTCCGCCACTATTCCGATCATTCACAGAGATGTCAAATCCACAAACATTCTCCTCGACGAAAATTTCACTGCGAAGGTCTCCGATTTTGGTGCTTCCAAACTAGTTCCTTTAGATCAGGTCGATTTGAACACGATCGTGCAAGGAACTCTGGGATACCTAGATCCAGAGTATTTGCAAACTAGTCAATTGACGGAGAAGAGTGACGTGTACAGTTTCGGCGTTGTTTTGGTCGAATTGATGACCGGAAAAGCTCCTCTGTCCTTCAGCCGATCGGAGGAAGAACGGAATCTATCAATGCATTTTCTAATCGCTCTGAAACAGAATCGGCTTGGAGAAATTGTGGACAGAAGTTTAGGCGGCGATGTGGATGTGGAGCAACTGAAGGAAGTTGCGAACCTTGCGAAGAGGTGTTTGAGAGTGAAGGGAGAAGAAAGGCCGACGATGAAGGAGGTTGCTGCAGAGCTTGAAGGATTATGTCAAATGGCGTTCGGTCATCCATGGAATGTTGATAAATCTTCGTCTGTTGAAGGAGGAGAGCTTTTGGTTAATGAAGAAGATAAAAATGAAGTTCCATTTGATAGTTTGCTTTTCCCCATCAACCAAATGATACCAAACGCACGTTCTGCCAG 1166 45.8 MGLLISCSWFYIGFKRWKLIKLREYFFRQNGGLMFEQQLSIRDDAAQTAKLFTAEELRKATNNYSDDRIVGKGGFGTVYKGILPTGAAVAIKKSKIVDKTQNKQFINEVIVLSQINHRNTVKLLGCCLEEEVPLLVYEFVSNGTLFDHIHKRKSQRSIPWKNRLKIASETAGVLSYLHSSATIPIIHRDVKSTNILLDENFTAKVSDFGASKLVPLDQVDLNTIVQGTLGYLDPEYLQTSQLTEKSDVYSFGVVLVELMTGKAPLSFSRSEEERNLSMHFLIALKQNRLGEIVDRSLGGDVDVEQLKEVANLAKRCLRVKGEERPTMKEVAAELEGLCQMAFGHPWNVDKSSSVEGGELLVNEEDKNEVPFDSLLFPINQMIPNARSA 388
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 12041589 12042754 - CePI673135_11g008960.1 Cec11g0896 216108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g0896 388 Pfam Protein kinase domain 64 331 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g0896 388 SMART serkin_6 64 342 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g0896 388 Gene3D Transferase(Phosphotransferase) domain 1 140 345 - -
Cec11g0896 388 FunFam Wall-associated receptor kinase 2 34 139 - -
Cec11g0896 388 ProSiteProfiles Protein kinase domain profile. 64 347 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g0896 388 SUPERFAMILY Protein kinase-like (PK-like) 48 336 IPR011009 -
Cec11g0896 388 ProSitePatterns Protein kinases ATP-binding region signature. 70 93 IPR017441 GO:0005524(InterPro)
Cec11g0896 388 Gene3D Phosphorylase Kinase; domain 1 33 139 - -
Cec11g0896 388 CDD STKc_IRAK 70 337 - -
Cec11g0896 388 ProSitePatterns Serine/Threonine protein kinases active-site signature. 185 197 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec11g0896 388 FunFam Wall-associated receptor kinase 2 140 356 - -
Cec11g0896 388 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 4 338 IPR045274 GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)|GO:0007166(PANTHER)|GO:0007166(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec08g0650 Cec-Chr8:18257321 Cec11g0896 Cec-Chr11:12041589 4.50E-110 dispersed
Cec11g0690 Cec-Chr11:7627726 Cec11g0896 Cec-Chr11:12041589 1.90E-77 dispersed
Cec11g0896 Cec-Chr11:12041589 Cec02g1439 Cec-Chr2:31729023 1.40E-59 dispersed
Cec11g0896 Cec-Chr11:12041589 Cec11g1957 Cec-Chr11:33629984 2.10E-119 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72404 PF00069 Pkinase 1.30E-51 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g0896 - - - 0.0