Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g0922 ATGGGTTCAATCAATTGGCTTGGCTTCTCTCTCTCCCCTCAACACCAACCCTCCGACCACCCTCCCGCCGCCGCCCCCTTCACCTCCGACCAAATCTCCCCCTCCGACGTCTCCGCCGTCTGCTTTGACAACCTTCCTTCTTCATATGGTGTTTATGAACCCTTCAACCGCAATAATCACTCTCAAGATTGGAATAGTATGAAGGGTTTAGGGTCGACTCAAAGTTTGGATTTTTCTGCTTTAATCGAAACCCAACACCAACCAAAGCTTGAAAATTTCCTCGGTCACCACTCTTTCACCGACCACGACCACGCCGCCGCCGTCTACACCAATGCATCCGCCAACTACATGTTCCAAAATTGTTCTTTGGAGCTTCCATCTGAGGCTGGCGGCGGCGGCGGCGGTGGAAGACCCAACGCCGGTAATGGAAACACCAACAACACTAGCTCTATTGGGTTATCTATGATTAAGACATGGCTAAGAAATCAACCGGCGCCGCCGCAAGCGGTGACCAAGAGTGGCGGAGATCACGACGGTGTAGTTGGAATAGGTAATAATATTACAAGCGCACATACTTTATCACTGTCGATGAACACTGGTCCCCCACCGCAGTCGCAGTCCTCCGGCTCGGCGGCTCTACCACTTCTCACGGCCAACGGCGGCGAAAGCTCTTCCTCCGATAACAAACAAGGCAAATCTTCCGCTGCCGAGCTGGACGCTGAAAACGGCGCCATTGAAGCTGTCCCTAGAAAATCTGTCGATACATTCGGACAAAGAACTTCCATCTACCGCGGAGTAACCAGGCATAGATGGACAGGAAGATATGAAGCTCATCTCTGGGACAATAGTTGCAGAAGAGAAGGACAGACTAGAAAAGGAAGACAAGGAGGTTATGACAAAGAAGAAAAGGCTGCTAGAGCTTACGATTTAGCGGCACTGAAATACTGGGGTACCACAACCACGACAAACTTTCCAATTAGTGATTACGAAAAAGAGTTGGAAGACATGAAGCACATGACTCGGCAAGAGTTTGTTGCGTCTCTAAGAAGGAAGAGTAGTGGGTTTTCTCGAGGAGCTTCAATTTACCGCGGAGTTACAAGACACCACCAGCATGGGAGATGGCAAGCAAGAATAGGGAGAGTTGCGGGGAATAAAGACCTCTACTTGGGAACTTTCAGTACACAAGAAGAAGCAGCTGAAGCATATGATATAGCCGCTATAAAGTTTAGGGGACTAAACGCAGTGACAAACTTTGACATGAGCCGTTACGATGTAAAAGCCATTCTTGAAAGCAACACATTACCTATCGGCGGCGCAGCCAAGCGCTTAAAAGACATCGACCACTCCGACATCCCTCTGGACCCCCAACGAACAGACGACACCATAACGTCACACCTCTCTGATGGAATAATAACCACCACCACTGCTCCCTACAGCGGTGGTGGATGGCCCACTCTCACCTTCCACCACCATCCCTACGCCTTCCACTACCCGTATGCTACCCCACAACAACGGTTGTGGTGCAAGCAAGAACATGACACTACTGCCATCGCCGCCGACAACTTCTTCCCACATGGTGGGGCTATGGACTCGATGGACCACAGCTCGGGGTCGAGCTCCGTGGTTTACAGCAGTGGTAACGGAGATGGGTACAGCGGGAACTTCTTGATCCCAATGGGAGCGGGAGGGGCGGAAGGGAGCAGCAGCAACAACAACAACAATAGCGGATTGGGAGACATGGGAGAAGTGAATTTATTTGGTAGTTGTTCTAACGTGGATGATCCATACAATGCAACAAGAACGACCAATTTGTATAATTATCATAACCCCTCTCATCAGCTGCAACCACCGCCGCTGTCGTCGGGGTTGCAAGGTTCTAGCTGCAACAACTGGCTTCCTCCGGCAAGGTCGGTTTGTCACGGGGGAGCTCCGCCGCCTTTCACCATTTGGAATGACACTTAG 1962 50.82 MGSINWLGFSLSPQHQPSDHPPAAAPFTSDQISPSDVSAVCFDNLPSSYGVYEPFNRNNHSQDWNSMKGLGSTQSLDFSALIETQHQPKLENFLGHHSFTDHDHAAAVYTNASANYMFQNCSLELPSEAGGGGGGGRPNAGNGNTNNTSSIGLSMIKTWLRNQPAPPQAVTKSGGDHDGVVGIGNNITSAHTLSLSMNTGPPPQSQSSGSAALPLLTANGGESSSSDNKQGKSSAAELDAENGAIEAVPRKSVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQGGYDKEEKAARAYDLAALKYWGTTTTTNFPISDYEKELEDMKHMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKAILESNTLPIGGAAKRLKDIDHSDIPLDPQRTDDTITSHLSDGIITTTTAPYSGGGWPTLTFHHHPYAFHYPYATPQQRLWCKQEHDTTAIAADNFFPHGGAMDSMDHSSGSSSVVYSSGNGDGYSGNFLIPMGAGGAEGSSSNNNNNSGLGDMGEVNLFGSCSNVDDPYNATRTTNLYNYHNPSHQLQPPPLSSGLQGSSCNNWLPPARSVCHGGAPPPFTIWNDT 653
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 14235145 14239365 + CePI673135_11g009220.1 Cec11g0922 216134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g0922 653 SUPERFAMILY DNA-binding domain 261 327 IPR016177 GO:0003677(InterPro)
Cec11g0922 653 ProSiteProfiles AP2/ERF domain profile. 361 419 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec11g0922 653 SMART rav1_2 361 425 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec11g0922 653 SMART rav1_2 262 331 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec11g0922 653 Pfam AP2 domain 362 411 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec11g0922 653 ProSiteProfiles AP2/ERF domain profile. 262 325 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec11g0922 653 MobiDBLite consensus disorder prediction 129 150 - -
Cec11g0922 653 FunFam AP2-like ethylene-responsive transcription factor ANT 261 327 - -
Cec11g0922 653 SUPERFAMILY DNA-binding domain 360 421 IPR016177 GO:0003677(InterPro)
Cec11g0922 653 CDD AP2 261 327 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec11g0922 653 MobiDBLite consensus disorder prediction 185 235 - -
Cec11g0922 653 MobiDBLite consensus disorder prediction 164 243 - -
Cec11g0922 653 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 205 454 - -
Cec11g0922 653 Gene3D AP2/ERF domain 361 421 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec11g0922 653 Gene3D AP2/ERF domain 262 327 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec11g0922 653 FunFam AP2-like ethylene-responsive transcription factor 360 421 - -
Cec11g0922 653 PRINTS Ethylene responsive element binding protein signature 401 421 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec11g0922 653 PRINTS Ethylene responsive element binding protein signature 263 274 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec11g0922 653 CDD AP2 360 421 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g2445 Cec-Chr2:41663069 Cec11g0922 Cec-Chr11:14235145 2.00E-105 dispersed
Cec06g1541 Cec-Chr6:28928123 Cec11g0922 Cec-Chr11:14235145 1.30E-99 dispersed
Cec07g1525 Cec-Chr7:30873012 Cec11g0922 Cec-Chr11:14235145 2.50E-94 dispersed
Cec10g0760 Cec-Chr10:11464649 Cec11g0922 Cec-Chr11:14235145 4.90E-100 dispersed
Cec10g1500 Cec-Chr10:29363872 Cec11g0922 Cec-Chr11:14235145 1.50E-64 dispersed
Cec10g1594 Cec-Chr10:30322942 Cec11g0922 Cec-Chr11:14235145 1.00E-42 dispersed
Cec10g2067 Cec-Chr10:35404544 Cec11g0922 Cec-Chr11:14235145 3.20E-39 dispersed
Cec11g0922 Cec-Chr11:14235145 Cec05g1176 Cec-Chr5:10717636 3.60E-07 dispersed
Cec11g0922 Cec-Chr11:14235145 Cec08g1733 Cec-Chr8:28445373 4.30E-93 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30529 PF00847 AP2 3.40E-09 CL0081 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g0922 K09285 - csv:101219473 1045.42