Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g0935 ATGGCGGCAATAGGCAGCAGATATTGGCAAATTCCAAACCTTGTCCGAAATGCAAACGTCCTATTGAGAAAAATCAAGGGTGCATGCATATTACTTGCACACCACCTTGTAAATTTGAGTTCTGCTGGCTTTGCCTTGGTCCATGGTCTGATCATGGAGAGAGGACAGGAGGATTTTATGCATTATGATGATGCTGAAAAGCGTAGAGAGATGGCCAAGAATTCTCTGGAGAGATATACTCATTATTATGAAAGATGGGCTACCAACCAATCGTCTAGGCAAAAGGCACTTGCGGATCTCCATCAAATGCAAACCGTGCATCTCGAAAAGTTAAGTGACATTCAGTGCCAACCTGAGTCACAGCTAAAGTTCATAAGCGAAGCATGGCTACAGATTGTCGAGTGTAGGCGAGTTCTTAAATGGACTTATGCCTATGGATATTATCTACCTGAGCGTGAACATGCTAAGAGACAATTCTTTGAATACTTGCAAGGTGAGGCTGAGTCTGGGTTGGAACGACTCCACCAATGTGCAGAAAAGGAGTTGCATGCTTACCTAAATGCTGCTGATGGTCCTTCAAAAGATTTCAATGAGTTCCGTACCAAACTTGCTGGACTAACCAGTGTAACTCGGAATTACTTCGAGAATTTAGTACGTGCGCTTGAGAATGGTCTGTCAGATGTGGATTCCCATGGTACCTGCAGCAAAACAGTAAGCTCAAAGAGTACTAGTGGCTGTAGGAGTAAAGGTGGGAAAGGCAAGATGAGTGCATTCAGAGCTAGCGGTTCGAGTCGAAACATTGATGATACTGACCATTGGTCTTGTGAACATTGCACCTTTGCGAATGTTAAATCAGCTACCTTCTGCCAGATGTGCCAGCAACGGCGATAA 891 44.22 MAAIGSRYWQIPNLVRNANVLLRKIKGACILLAHHLVNLSSAGFALVHGLIMERGQEDFMHYDDAEKRREMAKNSLERYTHYYERWATNQSSRQKALADLHQMQTVHLEKLSDIQCQPESQLKFISEAWLQIVECRRVLKWTYAYGYYLPEREHAKRQFFEYLQGEAESGLERLHQCAEKELHAYLNAADGPSKDFNEFRTKLAGLTSVTRNYFENLVRALENGLSDVDSHGTCSKTVSSKSTSGCRSKGGKGKMSAFRASGSSRNIDDTDHWSCEHCTFANVKSATFCQMCQQRR 296
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 14790344 14805796 + CePI673135_11g009350.1 Cec11g0935 216147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g0935 296 Gene3D - 51 228 - -
Cec11g0935 296 ProSitePatterns Zinc finger RanBP2-type signature. 273 292 IPR001876 -
Cec11g0935 296 MobiDBLite consensus disorder prediction 240 265 - -
Cec11g0935 296 Pfam Ariadne domain 63 227 IPR045840 -
Cec11g0935 296 ProSiteProfiles Zinc finger RanBP2 type profile. 269 296 IPR001876 -
Cec11g0935 296 Gene3D - 262 296 - -
Cec11g0935 296 SMART zf_4 271 295 IPR001876 -
Cec11g0935 296 SUPERFAMILY Ran binding protein zinc finger-like 269 296 IPR036443 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec08g0471 Cec-Chr8:13803545 Cec11g0935 Cec-Chr11:14790344 2.20E-99 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g0935 K11968 - csv:101218052 468.003