Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g0977 ATGCTCACTGATTTTGATCTCTCCTTGAAGTGTGAGGATTCGACGGCGACCCCACAGGTTATCAATGCTAAATATCTGACAAACGGCACCGCCCCGCTAAAGGACTACCAAATTGATGCCCCTCCTTTCACATCATCCTCCTGCATTCTTCCAAACTGTATAGTCCCGGCTGTGTCATGTTTCAACCCAAAACGCAAGCGCAAGAAGAAGTCTGGTCACCGTAACGGACCCGAGTTTGTCGCTGAACCGGTTGACGTCCGGTCAATGTCATTTGTTGGCACCCACGAGTACTTGGCCCCGGAGATCGTCTCTGGTGAGGGCCATGGAAGCGCGGTGGACTGGTGGACTCTAGGAGTGTTTGTGTTTGAGTTGTTTTATGGAGTGGCACCCTTTAGAGGCATGGACAGTGAGCTCACCTTGGCCAACATAGTGGCTAGAGCTCTTGAGTTCCCTAAAGAACCAGCGGTGCCAACGGCAGCGAAGGACCTCATCTCTCAGTTATTGATCAAAGACCCGGCGAGACAGTTGGGATCGACGACTGGGTCGTCGGCAATCAAGCACCATTCATTTTTCAAGGAAAGCCGCCTCTTTCCTGTGCTTCCCATGGTACACTGTCATCCGTTCCCTGCCTTGGTGTCATCAGAGATGTACAGGGCTTGCCACGGCAAAGTAGCTGGCAATGGCTGA 687 52.26 MLTDFDLSLKCEDSTATPQVINAKYLTNGTAPLKDYQIDAPPFTSSSCILPNCIVPAVSCFNPKRKRKKKSGHRNGPEFVAEPVDVRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGVFVFELFYGVAPFRGMDSELTLANIVARALEFPKEPAVPTAAKDLISQLLIKDPARQLGSTTGSSAIKHHSFFKESRLFPVLPMVHCHPFPALVSSEMYRACHGKVAGNG 228
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 16173631 16175085 - CePI673135_11g009770.1 Cec11g0977 216189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g0977 228 PANTHER FLIPPASE KINASE 1-RELATED 1 195 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Cec11g0977 228 ProSiteProfiles Protein kinase domain profile. 1 191 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g0977 228 SUPERFAMILY Protein kinase-like (PK-like) 84 216 IPR011009 -
Cec11g0977 228 Pfam Protein kinase domain 88 190 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g0977 228 Gene3D Transferase(Phosphotransferase) domain 1 87 196 - -
Cec11g0977 228 SMART serkin_6 5 191 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g0977 228 FunFam - 88 130 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g2312 Cec-Chr2:40445581 Cec11g0977 Cec-Chr11:16173631 7.40E-118 dispersed
Cec11g0297 Cec-Chr11:3207869 Cec11g0977 Cec-Chr11:16173631 8.50E-36 dispersed
Cec11g0977 Cec-Chr11:16173631 Cec11g1559 Cec-Chr11:29869735 7.40E-16 dispersed
Cec11g0977 Cec-Chr11:16173631 Cec02g1120 Cec-Chr2:24727069 4.60E-34 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72405 PF00069 Pkinase 1.50E-17 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g0977 K08286 - csv:101207262 377.096