Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g0982 ATGGGGTCCTGCTTGTCTTCGGAGAGCAGGAGCCCCATTCCTGGTTCCCCAACTTCTCCGGCTAAGCATCATCGGAGCAAGAACAGTTCCAAGAGGCGATATGGTTCTAGGAATTCCTCCTTTGGGGATCTCTCACTTCATCGGATCCCCGGCAGGCTCTTCGCTAATGGCTTCACTGATGTGGCCTCTCTGTTCACCCAGCAGGGCAAGAAAGGGACCAATCAGGATGCCATGATTGTTTGGGAGAATTTCGGCTCTAGAACTGATACGATCTTCTGTGGGGTTTTTGATGGCCATGGTCCCTATGGTCATATGGTTGCAAAGAAAGTGAGGGATTCTCTTCCTCTGAGGTTGAGTGCACATTGGGAGGTTAACTTGACCACGGATGATGTTCATAGAGAGATCAATCTTAATACAGGAAGTATGAACTCGGATGAAGCTACTTCCTTTTTATCTGCTGAAGAAGAGTCAAGGGCCTCCACTGATGTTGATGGAACGGAAAAGCAACCTGAAATTTTCCATACTCTGAAGGAGTCATTTCTTAAGGCTTTTAGAGTTATGGACTGGGAACTCAGAATGCACCAAACTATAGATAGCTTCTGTAGTGGGACTACAGCAGTGACTATTGTTAAACAGGGTCAGGATCTTGTCATTGGAAATGTTGGGGACTCCCGAGCTGTTTTGGGTATGAGAGATAAAGATGACTCGCTTGTTGCCATTCAATTGACTGTGGATCTCAAGCCAAATCTTCCAGCTGAAGCAGAGAGAATCCGTAGGTGTAGAGGTCGTGTGTTTGCTCTCCAAGATGAACCTGATGTAGCTCGAGTTTGGCTTCCAAACAGCAACTCTCCTGGACTTGCCATGGCACGGGCATTTGGAGATTTCTGCCTCAAAGACTTTGGTCTTATCTCTGTACCAGAAATATCATATCGACGGCTCACTGAAAAAGACGAATTCATTGTTCTGGCTACAGATGGAATATGGGATGTTCTGTCAAACAAAGAGGTTGTAGATATTGTTGCATCAGCTCCAAAACGTACTACTGCAGCTCGAACTCTGGTCGAAACTGCCATTAAAGCATGGAAACATAAATACCCAACTTCCAAAATTGATGACTGTGCGGTCGTTTGCCTTTTTCTTGACTCAAACTCGAGCAATCTATCATCTGCTTCCAATACCAAACCGGAAGAGCAACAAAGTTTAACAGAACAAGTCAGCACTGCAGTTGAGAATGAAAATTTCTCTGTCCCAAATGGTCTGAATCGTTCAGGAACTGTCCGAACCACCAGCAAGGAGATTTTGCAGGATGGAAGTGATGAAGAAGAAGATGAATCGAAGGAGGAAGAACATTCAGAAATGGGAATAGAATGGTCTGCCCTGGAAGGAGTGTCGCGCGTAAACACTTTGGTAACCCTGCCAAGATTCGATCCTGGAAAAGAAGATAAGAAAGGGCGGAAGAGAAGAAAAGTTATAAAAATTGAAGTTGAGAGAGGTCGGCCCAGCCTTATTAGTGCGTCTGGGGAATTGTTGACACTCTCGTATCGGTAG 1548 45.41 MGSCLSSESRSPIPGSPTSPAKHHRSKNSSKRRYGSRNSSFGDLSLHRIPGRLFANGFTDVASLFTQQGKKGTNQDAMIVWENFGSRTDTIFCGVFDGHGPYGHMVAKKVRDSLPLRLSAHWEVNLTTDDVHREINLNTGSMNSDEATSFLSAEEESRASTDVDGTEKQPEIFHTLKESFLKAFRVMDWELRMHQTIDSFCSGTTAVTIVKQGQDLVIGNVGDSRAVLGMRDKDDSLVAIQLTVDLKPNLPAEAERIRRCRGRVFALQDEPDVARVWLPNSNSPGLAMARAFGDFCLKDFGLISVPEISYRRLTEKDEFIVLATDGIWDVLSNKEVVDIVASAPKRTTAARTLVETAIKAWKHKYPTSKIDDCAVVCLFLDSNSSNLSSASNTKPEEQQSLTEQVSTAVENENFSVPNGLNRSGTVRTTSKEILQDGSDEEEDESKEEEHSEMGIEWSALEGVSRVNTLVTLPRFDPGKEDKKGRKRRKVIKIEVERGRPSLISASGELLTLSYR 515
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 16328819 16331926 + CePI673135_11g009820.1 Cec11g0982 216194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g0982 515 MobiDBLite consensus disorder prediction 146 166 - -
Cec11g0982 515 CDD PP2Cc 61 380 IPR001932 -
Cec11g0982 515 MobiDBLite consensus disorder prediction 1 16 - -
Cec11g0982 515 PANTHER PROTEIN PHOSPHATASE 35 379 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cec11g0982 515 Pfam Protein phosphatase 2C 130 359 IPR001932 -
Cec11g0982 515 SMART PP2C_4 52 378 IPR001932 -
Cec11g0982 515 MobiDBLite consensus disorder prediction 1 39 - -
Cec11g0982 515 ProSiteProfiles PPM-type phosphatase domain profile. 61 380 IPR001932 -
Cec11g0982 515 FunFam probable protein phosphatase 2C 33 56 383 - -
Cec11g0982 515 MobiDBLite consensus disorder prediction 386 432 - -
Cec11g0982 515 Gene3D - 59 383 IPR036457 -
Cec11g0982 515 MobiDBLite consensus disorder prediction 386 454 - -
Cec11g0982 515 SUPERFAMILY PP2C-like 61 381 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1605 Cec-Chr2:33619241 Cec11g0982 Cec-Chr11:16328819 7.60E-95 dispersed
Cec03g1062 Cec-Chr3:21930953 Cec11g0982 Cec-Chr11:16328819 7.40E-144 dispersed
Cec04g0794 Cec-Chr4:27591968 Cec11g0982 Cec-Chr11:16328819 2.10E-94 dispersed
Cec06g0567 Cec-Chr6:6278687 Cec11g0982 Cec-Chr11:16328819 7.40E-26 dispersed
Cec08g0461 Cec-Chr8:13581212 Cec11g0982 Cec-Chr11:16328819 2.20E-134 dispersed
Cec10g0367 Cec-Chr10:4408085 Cec11g0982 Cec-Chr11:16328819 5.60E-131 dispersed
Cec11g0982 Cec-Chr11:16328819 Cec11g1838 Cec-Chr11:32569232 8.00E-18 dispersed
Cec11g0982 Cec-Chr11:16328819 Cec02g1820 Cec-Chr2:36009078 1.70E-108 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g0982 - - - 0.0