Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec11g0982 | ATGGGGTCCTGCTTGTCTTCGGAGAGCAGGAGCCCCATTCCTGGTTCCCCAACTTCTCCGGCTAAGCATCATCGGAGCAAGAACAGTTCCAAGAGGCGATATGGTTCTAGGAATTCCTCCTTTGGGGATCTCTCACTTCATCGGATCCCCGGCAGGCTCTTCGCTAATGGCTTCACTGATGTGGCCTCTCTGTTCACCCAGCAGGGCAAGAAAGGGACCAATCAGGATGCCATGATTGTTTGGGAGAATTTCGGCTCTAGAACTGATACGATCTTCTGTGGGGTTTTTGATGGCCATGGTCCCTATGGTCATATGGTTGCAAAGAAAGTGAGGGATTCTCTTCCTCTGAGGTTGAGTGCACATTGGGAGGTTAACTTGACCACGGATGATGTTCATAGAGAGATCAATCTTAATACAGGAAGTATGAACTCGGATGAAGCTACTTCCTTTTTATCTGCTGAAGAAGAGTCAAGGGCCTCCACTGATGTTGATGGAACGGAAAAGCAACCTGAAATTTTCCATACTCTGAAGGAGTCATTTCTTAAGGCTTTTAGAGTTATGGACTGGGAACTCAGAATGCACCAAACTATAGATAGCTTCTGTAGTGGGACTACAGCAGTGACTATTGTTAAACAGGGTCAGGATCTTGTCATTGGAAATGTTGGGGACTCCCGAGCTGTTTTGGGTATGAGAGATAAAGATGACTCGCTTGTTGCCATTCAATTGACTGTGGATCTCAAGCCAAATCTTCCAGCTGAAGCAGAGAGAATCCGTAGGTGTAGAGGTCGTGTGTTTGCTCTCCAAGATGAACCTGATGTAGCTCGAGTTTGGCTTCCAAACAGCAACTCTCCTGGACTTGCCATGGCACGGGCATTTGGAGATTTCTGCCTCAAAGACTTTGGTCTTATCTCTGTACCAGAAATATCATATCGACGGCTCACTGAAAAAGACGAATTCATTGTTCTGGCTACAGATGGAATATGGGATGTTCTGTCAAACAAAGAGGTTGTAGATATTGTTGCATCAGCTCCAAAACGTACTACTGCAGCTCGAACTCTGGTCGAAACTGCCATTAAAGCATGGAAACATAAATACCCAACTTCCAAAATTGATGACTGTGCGGTCGTTTGCCTTTTTCTTGACTCAAACTCGAGCAATCTATCATCTGCTTCCAATACCAAACCGGAAGAGCAACAAAGTTTAACAGAACAAGTCAGCACTGCAGTTGAGAATGAAAATTTCTCTGTCCCAAATGGTCTGAATCGTTCAGGAACTGTCCGAACCACCAGCAAGGAGATTTTGCAGGATGGAAGTGATGAAGAAGAAGATGAATCGAAGGAGGAAGAACATTCAGAAATGGGAATAGAATGGTCTGCCCTGGAAGGAGTGTCGCGCGTAAACACTTTGGTAACCCTGCCAAGATTCGATCCTGGAAAAGAAGATAAGAAAGGGCGGAAGAGAAGAAAAGTTATAAAAATTGAAGTTGAGAGAGGTCGGCCCAGCCTTATTAGTGCGTCTGGGGAATTGTTGACACTCTCGTATCGGTAG | 1548 | 45.41 | MGSCLSSESRSPIPGSPTSPAKHHRSKNSSKRRYGSRNSSFGDLSLHRIPGRLFANGFTDVASLFTQQGKKGTNQDAMIVWENFGSRTDTIFCGVFDGHGPYGHMVAKKVRDSLPLRLSAHWEVNLTTDDVHREINLNTGSMNSDEATSFLSAEEESRASTDVDGTEKQPEIFHTLKESFLKAFRVMDWELRMHQTIDSFCSGTTAVTIVKQGQDLVIGNVGDSRAVLGMRDKDDSLVAIQLTVDLKPNLPAEAERIRRCRGRVFALQDEPDVARVWLPNSNSPGLAMARAFGDFCLKDFGLISVPEISYRRLTEKDEFIVLATDGIWDVLSNKEVVDIVASAPKRTTAARTLVETAIKAWKHKYPTSKIDDCAVVCLFLDSNSSNLSSASNTKPEEQQSLTEQVSTAVENENFSVPNGLNRSGTVRTTSKEILQDGSDEEEDESKEEEHSEMGIEWSALEGVSRVNTLVTLPRFDPGKEDKKGRKRRKVIKIEVERGRPSLISASGELLTLSYR | 515 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 16328819 | 16331926 | + | CePI673135_11g009820.1 | Cec11g0982 | 216194 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec11g0982 | 515 | MobiDBLite | consensus disorder prediction | 146 | 166 | - | - | |
Cec11g0982 | 515 | CDD | PP2Cc | 61 | 380 | IPR001932 | - | |
Cec11g0982 | 515 | MobiDBLite | consensus disorder prediction | 1 | 16 | - | - | |
Cec11g0982 | 515 | PANTHER | PROTEIN PHOSPHATASE | 35 | 379 | IPR015655 | GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Cec11g0982 | 515 | Pfam | Protein phosphatase 2C | 130 | 359 | IPR001932 | - | |
Cec11g0982 | 515 | SMART | PP2C_4 | 52 | 378 | IPR001932 | - | |
Cec11g0982 | 515 | MobiDBLite | consensus disorder prediction | 1 | 39 | - | - | |
Cec11g0982 | 515 | ProSiteProfiles | PPM-type phosphatase domain profile. | 61 | 380 | IPR001932 | - | |
Cec11g0982 | 515 | FunFam | probable protein phosphatase 2C 33 | 56 | 383 | - | - | |
Cec11g0982 | 515 | MobiDBLite | consensus disorder prediction | 386 | 432 | - | - | |
Cec11g0982 | 515 | Gene3D | - | 59 | 383 | IPR036457 | - | |
Cec11g0982 | 515 | MobiDBLite | consensus disorder prediction | 386 | 454 | - | - | |
Cec11g0982 | 515 | SUPERFAMILY | PP2C-like | 61 | 381 | IPR036457 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec02g1605 | Cec-Chr2:33619241 | Cec11g0982 | Cec-Chr11:16328819 | 7.60E-95 | dispersed | |
Cec03g1062 | Cec-Chr3:21930953 | Cec11g0982 | Cec-Chr11:16328819 | 7.40E-144 | dispersed | |
Cec04g0794 | Cec-Chr4:27591968 | Cec11g0982 | Cec-Chr11:16328819 | 2.10E-94 | dispersed | |
Cec06g0567 | Cec-Chr6:6278687 | Cec11g0982 | Cec-Chr11:16328819 | 7.40E-26 | dispersed | |
Cec08g0461 | Cec-Chr8:13581212 | Cec11g0982 | Cec-Chr11:16328819 | 2.20E-134 | dispersed | |
Cec10g0367 | Cec-Chr10:4408085 | Cec11g0982 | Cec-Chr11:16328819 | 5.60E-131 | dispersed | |
Cec11g0982 | Cec-Chr11:16328819 | Cec11g1838 | Cec-Chr11:32569232 | 8.00E-18 | dispersed | |
Cec11g0982 | Cec-Chr11:16328819 | Cec02g1820 | Cec-Chr2:36009078 | 1.70E-108 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec11g0982 | - | - | - | 0.0 |