Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec11g1164 | ATGTTGGAGGGTGGTCAAAAATTCACTGGAATGATCGATTTAAACGAGCATGCATATGATCTATCGCAAGGGTTTTACCATAAACTTGGTGAGGGAACCAACATGTCTATTGACAGCTTTGCAAGCTTGCAAACGAGCAATGATGGAGGGTCAGTTGCCATGTCTTTAGATAACAGCAGTGTAGGATCAAATGAGTCTCATACTCGGATCTTAAATCACCAAGGCTTGCGACGGCGTGCAAATGACAACCATACTTTTCAACATAGTGTTAACCGCCGCGGAAGAGTTACCCATCACCTGAGTGATGATGCACTAGCCCGAGCTTTATTTGATAGTAATACACCCACCCAGGGTCTTGAAAATTTTGAGAAGTGGACACTTGATTTAAGGAAGCTTAATATGGGGGAGGCTTTTGCTCAAGGTGCCTTTGGGAAACTCTACAGAGGTACTTATGATGGTGAAGATGTTGCTATCAAGATCTTGGAGAGGCCAGAGAATGACCTGGAAAAGGCTCAGTTAATGGAGCAGCAATATCAGCAGGAGGTGATGATGCTTGCTACACTGAAGCACCCAAATATTGTCCGGTTTATTGGATCATGCCATAAGCCGATGGTTTGGTGCATTGTTACTGAGTATGCGAAGGGTGGTTCAGTTAGGCAGTTCTTGATGAAGCGACAAAGTCGTTCTGTCCCACTGAAATTAGCTGTCAAACAAGCTTTGGATGTTGCCAGGGGGATGGAATATGTTCATGGCCTTGGGTTGATTCATAGGGACTTGAAATCGGACAACCTTCTGATTTTTGCAGACAAGTCTATCAAAGTTGCTGACTTTGGAGTGGCCCGGATTGAGGTGCAGACAGAAGGAATGACACCTGAGACTGGAACCTACCGCTGGATGGCTCCGGAGATGATCCAACACAGGCCTTACACCCAAAAGGTGGACCTCTATAGCTTTGGTATCGTTCTGTGGGAGCTCATAACTGGAATGCTTCCATTCCAGAACATGACAGCTGTTCAGGCCGCCTTTGCAGTCGTAAACAAAGGAGTCCGTCCTATCATTCCCAATGATTGCTTACCTGTATTGAGCGACATCATGACCCGGTGCTGGGACGCCAACCCTGATGTTAGGCCGTCATTTACCGAGGTGGTCAGAATGCTTGAGAATGCGCAGACTGAGATCATGACGACGGTTCGTAAGGCTCGTTTCAGGTGTTGCATTATGCAGCCGATGACAACAGACTGA | 1242 | 46.54 | MLEGGQKFTGMIDLNEHAYDLSQGFYHKLGEGTNMSIDSFASLQTSNDGGSVAMSLDNSSVGSNESHTRILNHQGLRRRANDNHTFQHSVNRRGRVTHHLSDDALARALFDSNTPTQGLENFEKWTLDLRKLNMGEAFAQGAFGKLYRGTYDGEDVAIKILERPENDLEKAQLMEQQYQQEVMMLATLKHPNIVRFIGSCHKPMVWCIVTEYAKGGSVRQFLMKRQSRSVPLKLAVKQALDVARGMEYVHGLGLIHRDLKSDNLLIFADKSIKVADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDLYSFGIVLWELITGMLPFQNMTAVQAAFAVVNKGVRPIIPNDCLPVLSDIMTRCWDANPDVRPSFTEVVRMLENAQTEIMTTVRKARFRCCIMQPMTTD | 413 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 23849824 | 23857138 | + | CePI673135_11g011640.1 | Cec11g1164 | 216376 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec11g1164 | 413 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 254 | 266 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec11g1164 | 413 | FunFam | Serine/threonine-protein kinase isoform 1 | 122 | 214 | - | - | |
Cec11g1164 | 413 | SMART | serkin_6 | 132 | 394 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec11g1164 | 413 | Pfam | Protein tyrosine and serine/threonine kinase | 133 | 386 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec11g1164 | 413 | PRINTS | Tyrosine kinase catalytic domain signature | 210 | 223 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec11g1164 | 413 | PRINTS | Tyrosine kinase catalytic domain signature | 357 | 379 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec11g1164 | 413 | PRINTS | Tyrosine kinase catalytic domain signature | 248 | 266 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec11g1164 | 413 | PRINTS | Tyrosine kinase catalytic domain signature | 313 | 335 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec11g1164 | 413 | PRINTS | Tyrosine kinase catalytic domain signature | 294 | 304 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec11g1164 | 413 | FunFam | serine/threonine-protein kinase HT1 | 215 | 408 | - | - | |
Cec11g1164 | 413 | Gene3D | Transferase(Phosphotransferase) domain 1 | 215 | 408 | - | - | |
Cec11g1164 | 413 | ProSiteProfiles | Protein kinase domain profile. | 132 | 393 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec11g1164 | 413 | CDD | STKc_MAP3K-like | 139 | 386 | - | - | |
Cec11g1164 | 413 | Gene3D | Phosphorylase Kinase; domain 1 | 121 | 214 | - | - | |
Cec11g1164 | 413 | SUPERFAMILY | Protein kinase-like (PK-like) | 117 | 386 | IPR011009 | - | |
Cec11g1164 | 413 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 75 | 388 | IPR050167 | GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec04g2011 | Cec-Chr4:38272286 | Cec11g1164 | Cec-Chr11:23849824 | 8.70E-79 | dispersed | |
Cec05g0136 | Cec-Chr5:1175491 | Cec11g1164 | Cec-Chr11:23849824 | 4.00E-25 | dispersed | |
Cec06g1938 | Cec-Chr6:32730833 | Cec11g1164 | Cec-Chr11:23849824 | 2.40E-61 | dispersed | |
Cec10g0042 | Cec-Chr10:495079 | Cec11g1164 | Cec-Chr11:23849824 | 2.70E-70 | dispersed | |
Cec10g1438 | Cec-Chr10:28745843 | Cec11g1164 | Cec-Chr11:23849824 | 6.30E-60 | dispersed | |
Cec10g1656 | Cec-Chr10:31038629 | Cec11g1164 | Cec-Chr11:23849824 | 2.30E-30 | dispersed | |
Cec10g1954 | Cec-Chr10:34337981 | Cec11g1164 | Cec-Chr11:23849824 | 2.90E-45 | dispersed | |
Cec10g2271 | Cec-Chr10:36947823 | Cec11g1164 | Cec-Chr11:23849824 | 8.40E-65 | dispersed | |
Cec11g1164 | Cec-Chr11:23849824 | Cec11g1517 | Cec-Chr11:29376439 | 4.90E-42 | dispersed | |
Cec11g1164 | Cec-Chr11:23849824 | Cec01g1470 | Cec-Chr1:29367565 | 2.30E-79 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72407 | PF07714 | PK_Tyr_Ser-Thr | 2.90E-65 | CL0016 | Cec | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec11g1164 | - | - | - | 0.0 |