Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g1164 ATGTTGGAGGGTGGTCAAAAATTCACTGGAATGATCGATTTAAACGAGCATGCATATGATCTATCGCAAGGGTTTTACCATAAACTTGGTGAGGGAACCAACATGTCTATTGACAGCTTTGCAAGCTTGCAAACGAGCAATGATGGAGGGTCAGTTGCCATGTCTTTAGATAACAGCAGTGTAGGATCAAATGAGTCTCATACTCGGATCTTAAATCACCAAGGCTTGCGACGGCGTGCAAATGACAACCATACTTTTCAACATAGTGTTAACCGCCGCGGAAGAGTTACCCATCACCTGAGTGATGATGCACTAGCCCGAGCTTTATTTGATAGTAATACACCCACCCAGGGTCTTGAAAATTTTGAGAAGTGGACACTTGATTTAAGGAAGCTTAATATGGGGGAGGCTTTTGCTCAAGGTGCCTTTGGGAAACTCTACAGAGGTACTTATGATGGTGAAGATGTTGCTATCAAGATCTTGGAGAGGCCAGAGAATGACCTGGAAAAGGCTCAGTTAATGGAGCAGCAATATCAGCAGGAGGTGATGATGCTTGCTACACTGAAGCACCCAAATATTGTCCGGTTTATTGGATCATGCCATAAGCCGATGGTTTGGTGCATTGTTACTGAGTATGCGAAGGGTGGTTCAGTTAGGCAGTTCTTGATGAAGCGACAAAGTCGTTCTGTCCCACTGAAATTAGCTGTCAAACAAGCTTTGGATGTTGCCAGGGGGATGGAATATGTTCATGGCCTTGGGTTGATTCATAGGGACTTGAAATCGGACAACCTTCTGATTTTTGCAGACAAGTCTATCAAAGTTGCTGACTTTGGAGTGGCCCGGATTGAGGTGCAGACAGAAGGAATGACACCTGAGACTGGAACCTACCGCTGGATGGCTCCGGAGATGATCCAACACAGGCCTTACACCCAAAAGGTGGACCTCTATAGCTTTGGTATCGTTCTGTGGGAGCTCATAACTGGAATGCTTCCATTCCAGAACATGACAGCTGTTCAGGCCGCCTTTGCAGTCGTAAACAAAGGAGTCCGTCCTATCATTCCCAATGATTGCTTACCTGTATTGAGCGACATCATGACCCGGTGCTGGGACGCCAACCCTGATGTTAGGCCGTCATTTACCGAGGTGGTCAGAATGCTTGAGAATGCGCAGACTGAGATCATGACGACGGTTCGTAAGGCTCGTTTCAGGTGTTGCATTATGCAGCCGATGACAACAGACTGA 1242 46.54 MLEGGQKFTGMIDLNEHAYDLSQGFYHKLGEGTNMSIDSFASLQTSNDGGSVAMSLDNSSVGSNESHTRILNHQGLRRRANDNHTFQHSVNRRGRVTHHLSDDALARALFDSNTPTQGLENFEKWTLDLRKLNMGEAFAQGAFGKLYRGTYDGEDVAIKILERPENDLEKAQLMEQQYQQEVMMLATLKHPNIVRFIGSCHKPMVWCIVTEYAKGGSVRQFLMKRQSRSVPLKLAVKQALDVARGMEYVHGLGLIHRDLKSDNLLIFADKSIKVADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDLYSFGIVLWELITGMLPFQNMTAVQAAFAVVNKGVRPIIPNDCLPVLSDIMTRCWDANPDVRPSFTEVVRMLENAQTEIMTTVRKARFRCCIMQPMTTD 413
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 23849824 23857138 + CePI673135_11g011640.1 Cec11g1164 216376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g1164 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec11g1164 413 FunFam Serine/threonine-protein kinase isoform 1 122 214 - -
Cec11g1164 413 SMART serkin_6 132 394 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g1164 413 Pfam Protein tyrosine and serine/threonine kinase 133 386 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec11g1164 413 PRINTS Tyrosine kinase catalytic domain signature 210 223 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec11g1164 413 PRINTS Tyrosine kinase catalytic domain signature 357 379 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec11g1164 413 PRINTS Tyrosine kinase catalytic domain signature 248 266 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec11g1164 413 PRINTS Tyrosine kinase catalytic domain signature 313 335 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec11g1164 413 PRINTS Tyrosine kinase catalytic domain signature 294 304 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec11g1164 413 FunFam serine/threonine-protein kinase HT1 215 408 - -
Cec11g1164 413 Gene3D Transferase(Phosphotransferase) domain 1 215 408 - -
Cec11g1164 413 ProSiteProfiles Protein kinase domain profile. 132 393 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g1164 413 CDD STKc_MAP3K-like 139 386 - -
Cec11g1164 413 Gene3D Phosphorylase Kinase; domain 1 121 214 - -
Cec11g1164 413 SUPERFAMILY Protein kinase-like (PK-like) 117 386 IPR011009 -
Cec11g1164 413 PANTHER SERINE-THREONINE PROTEIN KINASE 75 388 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g2011 Cec-Chr4:38272286 Cec11g1164 Cec-Chr11:23849824 8.70E-79 dispersed
Cec05g0136 Cec-Chr5:1175491 Cec11g1164 Cec-Chr11:23849824 4.00E-25 dispersed
Cec06g1938 Cec-Chr6:32730833 Cec11g1164 Cec-Chr11:23849824 2.40E-61 dispersed
Cec10g0042 Cec-Chr10:495079 Cec11g1164 Cec-Chr11:23849824 2.70E-70 dispersed
Cec10g1438 Cec-Chr10:28745843 Cec11g1164 Cec-Chr11:23849824 6.30E-60 dispersed
Cec10g1656 Cec-Chr10:31038629 Cec11g1164 Cec-Chr11:23849824 2.30E-30 dispersed
Cec10g1954 Cec-Chr10:34337981 Cec11g1164 Cec-Chr11:23849824 2.90E-45 dispersed
Cec10g2271 Cec-Chr10:36947823 Cec11g1164 Cec-Chr11:23849824 8.40E-65 dispersed
Cec11g1164 Cec-Chr11:23849824 Cec11g1517 Cec-Chr11:29376439 4.90E-42 dispersed
Cec11g1164 Cec-Chr11:23849824 Cec01g1470 Cec-Chr1:29367565 2.30E-79 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72407 PF07714 PK_Tyr_Ser-Thr 2.90E-65 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g1164 - - - 0.0