Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g1173 ATGGCAAAAGGAGGAGCTCAGAAGAAAGATGTGGCGGTGGCGATCGACAAAGACAAATGTAGTCAACAAGCTTTGAAATGGACAATCGAACGCCTTCTTAGCAGAGGCCAAGTGGTTACTCTGCTTCATGTTAAGCAGAAACCGTCGTCCTCTGCACATTCGATGACGAATATGAGTGCGGATTCGGATCTGGATGAGGCCGCTTTGTATAAACAACAGCTTGATAGTCATGCCAGAGACCAGTTCTTCCTCCCTTTTCGTTGCATTTGCACAAGAAACAATATACCATGCAATGAGGTGATGTTGGATGAAGGAGAGATTCCAAAGACATTAATAAATTATGTCTCCAAAAATGTTATAGACATTTTAGTACTTGGTTCCCCTACAAGATCAATTTACAAGAGATTCAAATCAGATGTTCCAAGCAGTGTATCAAAAGGAGCACCAGACTTCTGCACTGTTTACACTATTGGCAACAAAGGCAAGGTTTCAGTGAGACAATCCACAGCTCCACCGCCAGCAAAGCCCGTTGCTCCGCCGCGCACCCAACTGCAGCCCGCCCCACCCCGCCCTCAGCTGCTACATCAGCTCACCAATGCCTCGGAAGTTGCGGCCGAGCCGAACCAGCCACGCTCCCAAGCAGCTAAATCTTTAGATACTCAAAACAGCATAAATACTCCTCCTCGTGCCGTTCAAGAAGATTGGGACATCAAGTCACCATTTACAAGGCCAGGTTCAAGGGCTTCAATGAGCAAAGTGATGGAACCATCGACGGCGGATTCCGACATATCGTACGTCAGCAGCGGGAGGCGGAGCGTGGACCGTGGCTTCCAAGGGGCGTGGAACTCCAGCACTTGCACCGACTCGTATCGCCTTTCTAACGTCTCTGAATTTGAAGTTTCCAGCCCCGGTCCGGCTTCGCCTATGCTGGAAATGGGAGGAGGAACCAACAAATCATCCATTGATAATACTATCAATGATGATGATGATAATAACAACAATAGCAATATCTCTTCTTACCCTCAAGATATGTCATTTTGCTCTTTACAAAGTGAAACATTCTCTTGGCCTTCCAATTCCCACGCTCAGGATGATGTTGAAGCTGAGATGAGAAGACTGAAATTAGAGCTCAAACAAACCATGGACATGTACAGTACAGCCTGCAAAGAAGCCCTAAACGCCAAGCAGAAGGCGATGGAGCTCCATCGCTGGAAAGTGGAAGAAGAGCAAAGGTTAGAAGAGGCGAGAATGGGGGGGGAAGCAGCATTAGCAATGGCGGAGAAGGAGAAGATGAAATGCAAAGCAGCGATGGAGGCAGCTGAAGCTGCACAAAAGATCGCAGTACTTGAGGCGAGGAAAAGAGCGAACGCGGAGAAAATGGTGGACATGGAAGCGCAAGAAACTAAAAGAACACTTTCGCTTTCAGGATTCGGCCATGGAGAAATCGGTTACAGAAGGTACACAATCCAGGAAATCGAAACTGCCACGAAAGGCTTCTCTGATTCTCTAAAGATCGGTGAAGGCGGTTACGGTCCAGTCTTCCGTGGAGAACTTGACCACACACCGGTGGCGATCAAGGTTCTCCGGCCGGATGCTGCTCACGGACGATCACAATTTCAGCAAGAGGTTGAAGTTCTAAGTTGTATTCGTCATCCAAACATGGTTCTCCTTCTTGGAGCGTGTCCTGAAAACGGTTGTTTAGTTTACGAATTCATGGCGAATGGAAGCTTAGAAGACTGTCTCTTTCGAAAAGCGAATGATCCAATTCTTTCATGGCAGTTACGATTCCGAATCGCGGCGGAGATCGCAACCGGACTTCTCTTCCTACACCAGACCAGACCAGAACCGATTGTACACCGCGATCTGAAACCAGGGAACATTTTGCTAGATAGGAACTACGTGAGCAAAATCAGTGACGTCGGACTGGCGAGGCTGGTTCCTCCATCAGTGGCCGATTCAGTGACTCAATATCGGATGACAGCAACGGCAGGGACATTCTTCTACATCGATCCAGAGTATCAGCAAACAGGATTGCTAGGGATTAAATCGGACATTTACTCGTTGGGCGTGATGCTTCTGCAAATAATCACAGCCAGGCCCCCAATCGGACTGGCGCACGCTGTCGAAAGGGCGATTGAGAAGGGGACATTTGCAGAGATGCTTGATCCAGATGTGAAGGACTGGCCGGTTGAAGACGCGTTGAAGTTTGCGAAACTTTCAATTAAGTGCGCAGAAATGAGGAAGAGAGATCGACCAGATCTTGGGAAGGTGGTGCTGCCGGAGCTTAATCGGTTGAGAACAATGGCGGAGGAGAGTATGGGACTTCGGTCGTTCAGCGGTTGTAGTACATGTTCATCGCCATATGCAAGCCAAACTTCTCAGGAAATGATAAGTAGTGTAAATCTGGAGCATTGTGGAGCATGGGTTGAGAGCTCAAGCAGCCAATCAGATAGCAGCATGTCATCATACTCAGGCAAAAGACCTTATTGGCTGGACTAG 2499 48.22 MAKGGAQKKDVAVAIDKDKCSQQALKWTIERLLSRGQVVTLLHVKQKPSSSAHSMTNMSADSDLDEAALYKQQLDSHARDQFFLPFRCICTRNNIPCNEVMLDEGEIPKTLINYVSKNVIDILVLGSPTRSIYKRFKSDVPSSVSKGAPDFCTVYTIGNKGKVSVRQSTAPPPAKPVAPPRTQLQPAPPRPQLLHQLTNASEVAAEPNQPRSQAAKSLDTQNSINTPPRAVQEDWDIKSPFTRPGSRASMSKVMEPSTADSDISYVSSGRRSVDRGFQGAWNSSTCTDSYRLSNVSEFEVSSPGPASPMLEMGGGTNKSSIDNTINDDDDNNNNSNISSYPQDMSFCSLQSETFSWPSNSHAQDDVEAEMRRLKLELKQTMDMYSTACKEALNAKQKAMELHRWKVEEEQRLEEARMGGEAALAMAEKEKMKCKAAMEAAEAAQKIAVLEARKRANAEKMVDMEAQETKRTLSLSGFGHGEIGYRRYTIQEIETATKGFSDSLKIGEGGYGPVFRGELDHTPVAIKVLRPDAAHGRSQFQQEVEVLSCIRHPNMVLLLGACPENGCLVYEFMANGSLEDCLFRKANDPILSWQLRFRIAAEIATGLLFLHQTRPEPIVHRDLKPGNILLDRNYVSKISDVGLARLVPPSVADSVTQYRMTATAGTFFYIDPEYQQTGLLGIKSDIYSLGVMLLQIITARPPIGLAHAVERAIEKGTFAEMLDPDVKDWPVEDALKFAKLSIKCAEMRKRDRPDLGKVVLPELNRLRTMAEESMGLRSFSGCSTCSSPYASQTSQEMISSVNLEHCGAWVESSSSQSDSSMSSYSGKRPYWLD 832
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 24038135 24045431 + CePI673135_11g011730.1 Cec11g1173 216385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g1173 832 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec11g1173 832 ProSiteProfiles Protein kinase domain profile. 499 762 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g1173 832 Gene3D HUPs 9 157 IPR014729 -
Cec11g1173 832 MobiDBLite consensus disorder prediction 812 832 - -
Cec11g1173 832 PANTHER OS02G0152300 PROTEIN 11 792 IPR051348 -
Cec11g1173 832 MobiDBLite consensus disorder prediction 313 338 - -
Cec11g1173 832 MobiDBLite consensus disorder prediction 192 229 - -
Cec11g1173 832 MobiDBLite consensus disorder prediction 172 187 - -
Cec11g1173 832 Pfam Universal stress protein family 10 136 IPR006016 -
Cec11g1173 832 Gene3D Transferase(Phosphotransferase) domain 1 572 777 - -
Cec11g1173 832 MobiDBLite consensus disorder prediction 298 338 - -
Cec11g1173 832 CDD STK_N 11 161 - -
Cec11g1173 832 SUPERFAMILY Protein kinase-like (PK-like) 478 758 IPR011009 -
Cec11g1173 832 Coils Coil 423 443 - -
Cec11g1173 832 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 9 137 - -
Cec11g1173 832 FunFam U-box domain-containing protein 51 572 772 - -
Cec11g1173 832 Gene3D Phosphorylase Kinase; domain 1 481 571 - -
Cec11g1173 832 MobiDBLite consensus disorder prediction 163 232 - -
Cec11g1173 832 Pfam Protein kinase domain 502 753 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g1173 832 Coils Coil 363 383 - -
Cec11g1173 832 SMART serkin_6 499 762 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g1173 832 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 477 571 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec08g1293 Cec-Chr8:24916312 Cec11g1173 Cec-Chr11:24038135 4.90E-216 dispersed
Cec09g0078 Cec-Chr9:638457 Cec11g1173 Cec-Chr11:24038135 4.90E-155 dispersed
Cec11g0176 Cec-Chr11:1932542 Cec11g1173 Cec-Chr11:24038135 6.50E-104 dispersed
Cec11g1173 Cec-Chr11:24038135 Cec03g0003 Cec-Chr3:62714 5.20E-51 dispersed
Cec11g1173 Cec-Chr11:24038135 Cec08g1030 Cec-Chr8:22233607 2.60E-183 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72409 PF07714 PK_Tyr_Ser-Thr 5.00E-37 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g1173 - - - 0.0