Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g1180 ATGGCTTTCTTTGCTACAAAGTCTAGTGTTTTCTTTTCTCTCTTTTCAATACTTGTTGTTTCTCTTGTTACTAAGTTCATATTCCCCATGTCTCCACTTGCTTTCGGAGTCACAATCTTCATTGTTCCTCTCTTTACTTATATCATCTCTTCCATGGCCTTCTCCTCCAAGCTTCCTCCTGGCCCTCTCTCCATTCCCATCTTTGGCAATTGGCTCCAAGTTGGCAATGATCTCAACCATCGCCTTCTTGCTTCCTTGTGCAAGAGATTTGGCTCCATATTCCTCTTAAAGCTTGGCTCCAAGAACCTCGTTGTTGTGTCTGATGCCGAGCTTGCTAGTCAAGTTCTCCATGCTCAAGGCGTCGAGTTTGGCTCTCGCCCTCGAAATGTCGTGTTTGATATCTTCACTGGAAATGGTCAAGATATGGTGTTTACCGTTTATGGAGACCATTGGCGTAAGATGCGTAGAATCATGACATTGCCGTTTTTTACAAACAAAGTGGTGCACAACTACAGTGACATGTGGGAAGATGAGATGGATTCTGTGGTTCGTGACCTTAAGAGTAACAAGAAGTTTCAATCAGAAGGGATAGTCATTAGAAAGCGTTTGCAATTGATGTTGTACAATATCATGTATAGAATGATGTTTGATGCAAAGTTTGAGTCCCAAGATGATCCTTTGTTCATTGAAGCAACCCGATTCAACTCAGAAAGGAGTCGATTGGCACAAAGCTTTGAGTACAACTACGGAGATTTCATTCCTTTACTCAGACCCTTCTTGCGAGGTTACTTGAACAAGTGTAGAGATTTGCAGAGTAGGAGGTTGAACTTTTTCAACAAAAACTATGTTGAGAAAAGAAGGAAGATAATGGTTGCGAATGGAGATAAGCACAAGATAAGTTGCGCCATGGATCATATTATAGACGCTCAATTGAAAGGTGAGATAAGTGAAGAGAATGTGATTTACATCGTGGAGAACATCAACGTGGCTGCTATCGAAACGACATTGTGGTCGATGGAATGGGCGATAGCTGAGCTAGTGAATCATCCAGAAATCCAACGCAAGATTCGGGAGGAGATTAGTAATGTCCTAAAAGGAAAGGAAGTGACTGAATCTAACCTTCATGAACTACCATACTTGCAAGCAACAGTAAAAGAAACACTAAGGTTGCACACTCCAATTCCATTGTTGGTGCCACATATGAACTTGGAAGAGGCAAAGCTCGGAGGGTACACCATTCCAAAGGAATCTAAGGTGGTAGTGAATGCATGGTGGCTGGCTAATAACCCTGAGTGGTGGAAAAATCCAGAGGAGTTTAGGCCAGAGAGGTTCTTTGAAGAAGAAAGTGGAACAGAGGCTGTTGCTGCAGGAAAAGTGGATTATCGATTCTTACCATTTGGAGTTGGAAGAAGGAGTTGCCCTGGAATTGTTTTGGCAATGCCAATCTTAGGACTCATTGTTGCCAAGTTGGTTTCAAAGTTTGAAATGAAACCTCCTAATGGATTGGAGAAGATTGATGTCGCAGAAAAAGGAGGACAATTCAGTCTGCATATCTCCAACCACTCAACGTCAGACACTTGTAGGTTGTCATCGATCAAGCCACGAGTTGGATTGAGTTTTCCACGTCGCTATCGGTGTACAAGCCAAACCACTTGTGAATCCTCTGCCATTCGCCACCGTCTGCGTGTAGACCTCGTCACTGTCATGCGAATCTTGTTTTCTCTTGGATTTGACCGCCGATTGTCGCGCGTTGAGGTTCAAGCTTTGGTCGCTGCTCATCGTAGCCCGTCGTCGCTGTGGGTTCACTACCGCTAG 1815 43.69 MAFFATKSSVFFSLFSILVVSLVTKFIFPMSPLAFGVTIFIVPLFTYIISSMAFSSKLPPGPLSIPIFGNWLQVGNDLNHRLLASLCKRFGSIFLLKLGSKNLVVVSDAELASQVLHAQGVEFGSRPRNVVFDIFTGNGQDMVFTVYGDHWRKMRRIMTLPFFTNKVVHNYSDMWEDEMDSVVRDLKSNKKFQSEGIVIRKRLQLMLYNIMYRMMFDAKFESQDDPLFIEATRFNSERSRLAQSFEYNYGDFIPLLRPFLRGYLNKCRDLQSRRLNFFNKNYVEKRRKIMVANGDKHKISCAMDHIIDAQLKGEISEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEIQRKIREEISNVLKGKEVTESNLHELPYLQATVKETLRLHTPIPLLVPHMNLEEAKLGGYTIPKESKVVVNAWWLANNPEWWKNPEEFRPERFFEEESGTEAVAAGKVDYRFLPFGVGRRSCPGIVLAMPILGLIVAKLVSKFEMKPPNGLEKIDVAEKGGQFSLHISNHSTSDTCRLSSIKPRVGLSFPRRYRCTSQTTCESSAIRHRLRVDLVTVMRILFSLGFDRRLSRVEVQALVAAHRSPSSLWVHYR 604
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 24178202 24180721 + CePI673135_11g011800.1 Cec11g1180 216392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g1180 604 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 466 475 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cec11g1180 604 Pfam Cytochrome P450 59 521 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec11g1180 604 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 39 523 - GO:0004497(PANTHER)
Cec11g1180 604 Gene3D Cytochrome P450 53 528 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec11g1180 604 PRINTS E-class P450 group I signature 339 365 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec11g1180 604 PRINTS E-class P450 group I signature 463 473 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec11g1180 604 PRINTS E-class P450 group I signature 206 224 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec11g1180 604 PRINTS E-class P450 group I signature 422 446 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec11g1180 604 PRINTS E-class P450 group I signature 319 336 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec11g1180 604 PRINTS E-class P450 group I signature 111 132 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec11g1180 604 PRINTS E-class P450 group I signature 87 106 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec11g1180 604 PRINTS E-class P450 group I signature 473 496 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec11g1180 604 PRINTS E-class P450 group I signature 381 399 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec11g1180 604 PRINTS P450 superfamily signature 464 473 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec11g1180 604 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec11g1180 604 PRINTS P450 superfamily signature 330 347 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec11g1180 604 SUPERFAMILY Cytochrome P450 59 510 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec11g1180 604 FunFam Trans-cinnamate 4-monooxygenase 49 523 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec11g1180 Cec-Chr11:24178202 Cec03g0310 Cec-Chr3:3522663 1.00E-59 dispersed
Cec11g1180 Cec-Chr11:24178202 Cec11g1183 Cec-Chr11:24195778 5.50E-252 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g1180 K00487 - csv:101204747 991.49