Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g1193 ATGCCATCGCTTAAGGGCTCTCCGTACGCTAGACGGAGTGATGTGGAGTCCGGTAGCAGCAATTCCGGCGACGCGGAGGAGGAGGATTTATCTAATCCTTTTGAAATTCACACCACTAAGCATGCTTCTGTTGACAGACTCCGCCGCTGGAGACAAGCTGCGCTAGTGTTAAATGCTTCTCGTCGTTTTCGGTATACTTTAGACTTGAAAAAGGAAGAAGAGAAGAAAGAAGCTTTGAGAAAGATTAGAGCACATGCACAAGCCATACGAGCTGCATATCTCTTTAAAGAGGCTGGGGATCGTGTAACAGGACCAGGGCCTGCAGCAGCAGAAGCTCCAAATGGTGATTTTTCAGTTGGACCAGAGCAACTGGCTGTGTTGGTAAAGGATCGTAATGTTGAAGCTCTGGAGCAGTATGGAGGGGTTAAAGGGGTAGCAGATATGTTACAATCAAATTTAGAGAAGGGGATAATTGGTGATGATTCTGATTTATTGAAACGGAGAAACACGTATGGTTCAAACACATATCCCCAGAAACCGGGAAGGAGTTTTTGGAGGTTTCTCTGGGAAGCTTGGCAAGATCTTACATTGATCATATTGATGATCGCTGCTGTTGCTTCGTTGGTGCTAGGCATAAAGACTGAGGGAATCAAGGAAGGCTGGTATGATGGTGGAAGCATTGCTTTTGCAGTTATTCTTGTCATTGTCGTAACAGCTATTAGTGACTATCGACAATCTCTTCAATTTCAGAACTTGAATAAGGAGAAGAGGAACATACAATTGGAGGTTGTTAGGGGTGGCCGTCGAATTGAGGTCTCAATTTATGACATCGTTGTTGGTGATGTTATACCGCTCAATATTGGTGATCAGGTCCCTGCTGATGGCATCCTAATTTCTGGACACTCACTTGCTATTGATGAATCAAGCATGACTGGAGAGAGCAAGATTGTTCAAAAGCATAGTAAGGAACCGTTCCTGATGTCTGGATGCAAAGTAGCTGATGGTAGTGGCACCATGCTGGTTACAAGTGTTGGAGTTAATACTGAATGGGGTTTGCTTATGGCAAGTATTTCTGAAGACAACGGCGAGGAAACTCCTTTGCAGGTGCGTTTAAATGGTGTGGCAACTTTAATTGGTATTGTTGGACTCACAGTAGCTTTTGCTGTCTTGATTGTGCTCCTTACAAGGTATTTCACTGGTCACACCAAAAATCCAGATGGAAGCCGTCAGTTTATTCCAGGCCAGACAAAAGTTGGTCGTGCCGTTGACGGGGCCATCAAAATTGTCACTATTGCGGTGACCATTGTTGTGGTTGCTGTGCCGGAAGGGCTTCCACTAGCTGTAACCTTAACTCTTGCTTACTCAATGAGAAAGATGATGGCAGACAAGGCATTGGTGCGGAGGCTATCAGCATGTGAGACGATGGGGTCTGCTACAACTATTTGTAGTGATAAGACTGGAACCTTAACTTTAAATCAGATGACCATTGTTGAGGCTTATGCTGGTGGGAAGAAGATTGATCCGCCAGAGAAGAAGTCAGAGTTGTCTCCTATGTTACACTCTACACTTATTGAAGGCATTGCTCTAAACTCAAATGGCAGTGTATATATGCCTGAGAGTGGTGGAGAGGTGGAGGTTACAGGATCACCAACAGAGAAGGCTATTCTTAATTGGGGTATCAAGCTGGGAATGAACTTTGAAGCACTTCGATCAGAATCTGCAATTCTTCACGTCTTCCCCTTCAGCTCAGATAAAAAACGTGGTGGTGTTGCAGGTCAACGGGATGATCAAGTCCGTGTACACTGGAAAGGTGCTGCTGAGATAGTCTTAGCATCGTGCACACACTATATGGATGAACATGATCAATCTGTTCAATTAGATGAAGATAAGATGAAGTATTTTAAAAGGGCTATCGAAGATATGGCTTCACGTAGTTTACGTTGTGTTGCAATTGCATATAGACCTGTTGAACCTGAGAATGTTCCTGATGGCGAAGAACAATTGAGTAAGTGGGCTCTACCAGAAGACGACCTTGTGTTGTTGGCTATAGTTGGTTTGAAGGACCCCTGCCGACCAGGAGTAAAAGATGCAGTAAGACTTTGCCAAAAGGCTGGTGTTAAGGTGCGCATGGTCACTGGTGATAATGTTCAAACTGCTAGAGCTATTGCATTGGAATGTGGAATACTTGGTTCAGATTCAGATGCTACTGAGCCAAATCTTATTGAAGGAAAAGTATTCCGTGCCCTATCTGATGCCCAAAGAGAAGAAGTTGCTGAGAAAATATCAGTGATGGGCCGATCCTCCCCCAATGATAAGCTTCTCCTTGTGCAAGCGTTGAGAAAGAAAGGACATGTAGTTGCTGTTACTGGAGATGGTACAAATGATGCTCCTGCATTGCATGAGGCAGATATTGGTCTTGCAATGGGAATTCAGGGGACAGAAGTTGCCAAAGAAAGCTCCGATATTATTATTTTAGATGACAACTTTGCTTCTGTTGTGAAGGTTGTAAGGTGGGGCCGATCAGTATATGCAAATATTCAGAAATTCATTCAGTTTCAGCTTACTGTTAATGTTGCAGCACTCATTATAAATGTCGTGGCAGCAGTATCCTCTGGTGATGTCCCACTAAATGCTGTGCAGCTTTTGTGGGTTAATCTTATCATGGACACTCTCGGAGCATTAGCTTTGGCTACTGAACCACCAACCAATCACCTTATGGACAGATCGCCTGTTGGAAGAAGAGAACCTCTCATAACAAATATCATGTGGAGGAACCTCCTGATACAGGCATTTTATCAAGTCACTGTGTTGCTCGTCCTCAATTTTCGTGGTCGGAGTTTGCTTCATTTGAACCACTCTAATTTAGAAGCTATCAAAGTGAAGAATACGTTGATTTTCAATGCATTTGTACTTTGTCAAATTTTCAATGAGTTTAATGCTCGAAAACCTGATGAGAAGAATATATTCAAAGGAGTCACTAAAAATTATCTCTTCATCGGGATCATTGCAATTACTGTCATCCTCCAGGTGATAATAATCGAGTTTCTTGGGAAATTCACATCCACGGTAAGGCTAAATTGGAAATATTGGATTATTTCCATAATCATTGGCGTTATCAGTTGGCCTCTTGCTCTTCTTGGGAAATTCATACCTGTTCCTGAAACTCCCTTCCATGTGCTCATTATCAGAATGTTCCGTAAACGACAACCTGGGGGAGGTTAA 3222 43.23 MPSLKGSPYARRSDVESGSSNSGDAEEEDLSNPFEIHTTKHASVDRLRRWRQAALVLNASRRFRYTLDLKKEEEKKEALRKIRAHAQAIRAAYLFKEAGDRVTGPGPAAAEAPNGDFSVGPEQLAVLVKDRNVEALEQYGGVKGVADMLQSNLEKGIIGDDSDLLKRRNTYGSNTYPQKPGRSFWRFLWEAWQDLTLIILMIAAVASLVLGIKTEGIKEGWYDGGSIAFAVILVIVVTAISDYRQSLQFQNLNKEKRNIQLEVVRGGRRIEVSIYDIVVGDVIPLNIGDQVPADGILISGHSLAIDESSMTGESKIVQKHSKEPFLMSGCKVADGSGTMLVTSVGVNTEWGLLMASISEDNGEETPLQVRLNGVATLIGIVGLTVAFAVLIVLLTRYFTGHTKNPDGSRQFIPGQTKVGRAVDGAIKIVTIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTIVEAYAGGKKIDPPEKKSELSPMLHSTLIEGIALNSNGSVYMPESGGEVEVTGSPTEKAILNWGIKLGMNFEALRSESAILHVFPFSSDKKRGGVAGQRDDQVRVHWKGAAEIVLASCTHYMDEHDQSVQLDEDKMKYFKRAIEDMASRSLRCVAIAYRPVEPENVPDGEEQLSKWALPEDDLVLLAIVGLKDPCRPGVKDAVRLCQKAGVKVRMVTGDNVQTARAIALECGILGSDSDATEPNLIEGKVFRALSDAQREEVAEKISVMGRSSPNDKLLLVQALRKKGHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALIINVVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTNHLMDRSPVGRREPLITNIMWRNLLIQAFYQVTVLLVLNFRGRSLLHLNHSNLEAIKVKNTLIFNAFVLCQIFNEFNARKPDEKNIFKGVTKNYLFIGIIAITVILQVIIIEFLGKFTSTVRLNWKYWIISIIIGVISWPLALLGKFIPVPETPFHVLIIRMFRKRQPGGG 1073
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 24541914 24562118 - CePI673135_11g011930.1 Cec11g1193 216405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g1193 1073 PRINTS P-type cation-transporting ATPase superfamily signature 704 714 - -
Cec11g1193 1073 PRINTS P-type cation-transporting ATPase superfamily signature 813 825 - -
Cec11g1193 1073 PRINTS P-type cation-transporting ATPase superfamily signature 789 808 - -
Cec11g1193 1073 PRINTS P-type cation-transporting ATPase superfamily signature 482 496 - -
Cec11g1193 1073 PRINTS P-type cation-transporting ATPase superfamily signature 682 693 - -
Cec11g1193 1073 PRINTS P-type cation-transporting ATPase superfamily signature 306 320 - -
Cec11g1193 1073 FunFam Calcium-transporting ATPase 237 358 - -
Cec11g1193 1073 FunFam Calcium-transporting ATPase 190 247 - -
Cec11g1193 1073 Gene3D - 42 98 - -
Cec11g1193 1073 Pfam haloacid dehalogenase-like hydrolase 480 803 - -
Cec11g1193 1073 NCBIfam HAD-IC family P-type ATPase 756 869 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cec11g1193 1073 NCBIfam HAD-IC family P-type ATPase 227 399 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cec11g1193 1073 NCBIfam HAD-IC family P-type ATPase 422 505 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cec11g1193 1073 Pfam Cation transporter/ATPase, N-terminus 139 207 IPR004014 -
Cec11g1193 1073 PANTHER CATION TRANSPORTING ATPASE 91 1052 - GO:0005388(PANTHER)|GO:0005887(PANTHER)|GO:0019829(PANTHER)|GO:0043231(PANTHER)
Cec11g1193 1073 SMART Cation_ATPase_N_a_2 138 212 IPR004014 -
Cec11g1193 1073 NCBIfam calcium-translocating P-type ATPase, PMCA-type 132 1052 IPR006408 GO:0005388(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0070588(InterPro)
Cec11g1193 1073 SUPERFAMILY HAD-like 480 894 IPR036412 -
Cec11g1193 1073 Pfam Ca2+-ATPase N terminal autoinhibitory domain 31 74 IPR024750 GO:0005516(InterPro)
Cec11g1193 1073 Pfam E1-E2 ATPase 260 460 - -
Cec11g1193 1073 Gene3D - 479 834 IPR023214 -
Cec11g1193 1073 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 489 686 IPR023299 GO:0000166(InterPro)
Cec11g1193 1073 Gene3D - 190 1041 - -
Cec11g1193 1073 FunFam Calcium-transporting ATPase 806 1054 - -
Cec11g1193 1073 CDD P-type_ATPase_Ca_PMCA-like 164 922 - -
Cec11g1193 1073 FunFam Calcium-transporting ATPase 9 plasma membrane-type 336 506 - -
Cec11g1193 1073 MobiDBLite consensus disorder prediction 1 36 - -
Cec11g1193 1073 FunFam Calcium-transporting ATPase 683 834 - -
Cec11g1193 1073 SUPERFAMILY Calcium ATPase, transmembrane domain M 139 1052 IPR023298 -
Cec11g1193 1073 Gene3D - 492 689 IPR023299 GO:0000166(InterPro)
Cec11g1193 1073 FunFam Calcium-transporting ATPase 42 98 - -
Cec11g1193 1073 FunFam Calcium-transporting ATPase 492 689 - -
Cec11g1193 1073 SFLD Haloacid Dehalogenase 464 841 - -
Cec11g1193 1073 Gene3D - 164 358 - -
Cec11g1193 1073 SFLD p-type atpase 464 841 IPR044492 -
Cec11g1193 1073 MobiDBLite consensus disorder prediction 13 27 - -
Cec11g1193 1073 Coils Coil 69 89 - -
Cec11g1193 1073 ProSitePatterns E1-E2 ATPases phosphorylation site. 484 490 IPR018303 -
Cec11g1193 1073 PRINTS Sodium/potassium-transporting ATPase signature 475 496 - -
Cec11g1193 1073 PRINTS Sodium/potassium-transporting ATPase signature 225 245 - -
Cec11g1193 1073 PRINTS Sodium/potassium-transporting ATPase signature 600 618 - -
Cec11g1193 1073 SUPERFAMILY Calcium ATPase, transduction domain A 260 355 IPR008250 -
Cec11g1193 1073 Pfam Cation transporting ATPase, C-terminus 874 1050 IPR006068 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1733 Cec-Chr2:35090283 Cec11g1193 Cec-Chr11:24541914 1.70E-285 dispersed
Cec03g0176 Cec-Chr3:1818080 Cec11g1193 Cec-Chr11:24541914 1.10E-96 dispersed
Cec08g1722 Cec-Chr8:28321518 Cec11g1193 Cec-Chr11:24541914 3.70E-84 dispersed
Cec09g0158 Cec-Chr9:1375200 Cec11g1193 Cec-Chr11:24541914 0.00E+00 dispersed
Cec10g1586 Cec-Chr10:30251384 Cec11g1193 Cec-Chr11:24541914 9.90E-259 dispersed
Cec11g0369 Cec-Chr11:3877999 Cec11g1193 Cec-Chr11:24541914 2.80E-42 dispersed
Cec11g1193 Cec-Chr11:24541914 Cec11g1242 Cec-Chr11:25962783 3.70E-41 dispersed
Cec11g1193 Cec-Chr11:24541914 Cec09g0715 Cec-Chr9:6449927 1.30E-288 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g1193 K01537 - csv:101211703 1939.47