Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g1200 ATGGATCCCCCAACCTCCAACCGTAGTCGTAGAACTACCAACAAATATGATCTCTACTCCACAGTTGTCATCCATTCCAATTCTGATTCCGACTCCGATAACAATCCCGACGATCGGAATCTTCACCGTCGACGAAGGCCGCCGAGCGAAGGACAAGACCTTTACGCCACAATACTCCATAAGGACGTTGATAAGCCCCGTGACGACGATGATGACGATGATTCCTCTCTCCCTCCTCTCCTCAAACGCCTTCCCAAGGATTTCGGTGGCGGAGCTCCAATTGACTACGAGGATGACCATGCTTTTGATTTCGATCACGATACTGAAGACTTCGGTACCATGATCGTCAAGACGGATAGGAATCGTCCTCGAAATCGCTCTGTGTCTTCATCAGTTTCGACCATGCCCCGGAAGAGAGCTGGCAGTGAAGAAGGCGACGACAGCGAGGAAGATGATGGTGATGGGTATTCTACGTTTGTGGTGAGGTCCACGGCCAGGTCGCGGAACAGGGAATCGGTTAGTGGAACTGTTGTTCGAAGGCCCGCTGGTAGTCGCAGTGGTTCCAGAGATGGAGGCGGAGGACTTGAGGGGTCCACAATGGGCAGAGCGGTCGCGAGTATGCAAGGTATGGGAGAGTTAGGGTTTGGGAAGCAGAGGAAGGGGAATGGATCACCGAGGAGTGAGGAAGGCGGTGGTCTGATACGCAGTAAGGTATCCTCGAGTTCGATTCCGGAAAGCATCACCAGGGAAGATCCACATTCTAAGTATGAATTGCTCAACGAACTTGGAAAGGGGTCCTATGGGGCTGTATATAAAGCAAGGGATATTAAGACCTCTGAGCTGGTTGCTATCAAGGTCATTTCTTTGTGTGAAGGGGAGGAAGGATATGAAGAAATTCGTGGTGAAATTGAGATGTTGCAGCAATGCAGTCATCCGAATGTTGTCCGCTATCTTGGGAGCTATCAAGGAGAAGAGTATCTATGGATAGTAATGGAGTACTGTGGGGGTGGCAGTGTTGCTGACTTGATGAATGTTACCGAGGAAGCTCTAGAGGAATATCAGATTGCATATATCTGTAGGGAGGCATTGAAGGGCCTCACTTATCTTCATTCAATATTCAAAGTTCACAGAGATATCAAGGGCGGTAATATTTTGTTAACTGAGCAAGGAGATGTCAAGTTGGGCGATTTTGGAGTTGCAGCCCAGCTGACTAGGACCATGTCAAAGCGCAATACATTCATTGGCACTCCACATTGGATGGCTCCAGAAGTTATTCAGGAAAGTCGATATGATGGAAAGGTGGATGTGTGGGCTCTTGGTGTCTCTGCTATTGAAATGGCCGAGGGGCTTCCTCCAAGATCGGCAGTGCATCCAATGAGGGTTTTATTCATGATATCGATTGAGCCAGCTCCAATGCTTGAAGACAAAGAAAAATGGTCCTTGCTGTTCCACGATTTTGTTGCAAAGTGTCTGACAAAAGATCCCCGTTCACGTCCTGCTGCTTCTGAAATGTTGAAGCACAAATTCATTGAGAAATGCAGATGTGGGGCATCGGCAATGTTGCCCAAGATTGAAAAAGCTAGGAAAATCAGGACTTTAATGGCTCAGGAAGCACATAGTATTGCTCCAGATGCATCCGGAGATGGTACAATAGTAGCTGCAAATTTGAATCAAGATTATGGAGATACTGTTCCTTCAAAGCCTCAGAATAGTGGACTTCAGGTAGCAAATGAAATGGCAGCTAGTGGCACTTGGAGGAAGCAAGAGCAATCGGGCGCTGAACTTGTAGCAGAAGGTAATTTTGGCACTGTAATAGTCCATGATGGAGATGAGAATGATAAGGTGGCCTCTCAACTGGATATTGGCACTGCTGAACCACCAACTGGTTCCTTACACAATGAGAGCCTATCCATTAGTGTAACTAGAGTCGACTCTAGTGTGCTGGATCGTACCAGAGGTATTGTGCGTAATATTCTTGATGGAAAATCGGATTCCACAATGCATGCATCTTCACCTTCATTTTTGGGTATTCATGAGCATAGCACGTTGAAGAATGAAACTGTCAGCCGGAAATCATTTGCTCTGCAGGACAAGCTTTGGTCCATTTATGCAGCGGGTAACACTGTACCCATTCCGTTTTTGAGGGCTACTGACATATCCCCTATTGCTTTGTTATCTGACAATGTCCTTGGAGGCATGCAGCACGACCATAGGGGTACTGTAGCTGTCGAAACGCTTCAGGAACTTTTCACTGGTGATGGACAATCAAAAAAGGGTCGTAGGGGTCAAAATGAGATGCCCCTTCCACCCAGTGTTTATCAAAGACTTACTTCAAGTCCAACACTATTGAACCTTGCCCAGGCTTTAGCTTACCACAGAATGTGTTACGAAGATATGCCGCTTCAGGAGTTGCAGGCAACTCAAGAACAACAAACAATTCAAAATCTTTGTGATACACTTAGAACTATCCTCCGATTGTAG 2481 46.8 MDPPTSNRSRRTTNKYDLYSTVVIHSNSDSDSDNNPDDRNLHRRRRPPSEGQDLYATILHKDVDKPRDDDDDDDSSLPPLLKRLPKDFGGGAPIDYEDDHAFDFDHDTEDFGTMIVKTDRNRPRNRSVSSSVSTMPRKRAGSEEGDDSEEDDGDGYSTFVVRSTARSRNRESVSGTVVRRPAGSRSGSRDGGGGLEGSTMGRAVASMQGMGELGFGKQRKGNGSPRSEEGGGLIRSKVSSSSIPESITREDPHSKYELLNELGKGSYGAVYKARDIKTSELVAIKVISLCEGEEGYEEIRGEIEMLQQCSHPNVVRYLGSYQGEEYLWIVMEYCGGGSVADLMNVTEEALEEYQIAYICREALKGLTYLHSIFKVHRDIKGGNILLTEQGDVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKVDVWALGVSAIEMAEGLPPRSAVHPMRVLFMISIEPAPMLEDKEKWSLLFHDFVAKCLTKDPRSRPAASEMLKHKFIEKCRCGASAMLPKIEKARKIRTLMAQEAHSIAPDASGDGTIVAANLNQDYGDTVPSKPQNSGLQVANEMAASGTWRKQEQSGAELVAEGNFGTVIVHDGDENDKVASQLDIGTAEPPTGSLHNESLSISVTRVDSSVLDRTRGIVRNILDGKSDSTMHASSPSFLGIHEHSTLKNETVSRKSFALQDKLWSIYAAGNTVPIPFLRATDISPIALLSDNVLGGMQHDHRGTVAVETLQELFTGDGQSKKGRRGQNEMPLPPSVYQRLTSSPTLLNLAQALAYHRMCYEDMPLQELQATQEQQTIQNLCDTLRTILRL 826
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 24899978 24915018 + CePI673135_11g012000.1 Cec11g1200 216412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g1200 826 CDD STKc_MAP4K3_like 255 510 - -
Cec11g1200 826 ProSitePatterns Protein kinases ATP-binding region signature. 262 285 IPR017441 GO:0005524(InterPro)
Cec11g1200 826 MobiDBLite consensus disorder prediction 160 174 - -
Cec11g1200 826 Pfam Protein kinase domain 256 510 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g1200 826 MobiDBLite consensus disorder prediction 24 94 - -
Cec11g1200 826 MobiDBLite consensus disorder prediction 115 200 - -
Cec11g1200 826 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 231 788 IPR050285 GO:0006468(PANTHER)|GO:0035556(PANTHER)|GO:0043408(PANTHER)
Cec11g1200 826 MobiDBLite consensus disorder prediction 31 50 - -
Cec11g1200 826 SUPERFAMILY Protein kinase-like (PK-like) 253 511 IPR011009 -
Cec11g1200 826 MobiDBLite consensus disorder prediction 213 252 - -
Cec11g1200 826 FunFam Aurora kinase A 248 337 - -
Cec11g1200 826 ProSiteProfiles Protein kinase domain profile. 256 510 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g1200 826 SMART serkin_6 256 510 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g1200 826 Gene3D Transferase(Phosphotransferase) domain 1 252 544 - -
Cec11g1200 826 FunFam serine/threonine-protein kinase dst1 isoform X1 253 543 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec07g0761 Cec-Chr7:15446773 Cec11g1200 Cec-Chr11:24899978 5.50E-171 dispersed
Cec07g0762 Cec-Chr7:15458882 Cec11g1200 Cec-Chr11:24899978 3.00E-269 dispersed
Cec11g1200 Cec-Chr11:24899978 Cec11g1834 Cec-Chr11:32501675 1.30E-70 dispersed
Cec11g1200 Cec-Chr11:24899978 Cec03g1594 Cec-Chr3:34045737 7.80E-39 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72410 PF00069 Pkinase 7.40E-68 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g1200 - - - 0.0