Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec11g1209 | ATGGAGAACATTCTGGACGAGTATGGGTATTACTGGGAAACGAATATGTTTCTGCAGACGCAAGAGTTCGACAGTTGGGGATTGGATGAAGCATTTTACGGTTCTTACGACTCGAGCTCGCCCGACGGAACGCTGTCGTCGTTAGAGGCGTCCAAGAACATCTTATCGGAGAGGAATCGGAGGAAGAAGCTCAACGATAGGCTTCTTGCTCTCAGAGCTGTGGTCCCTAATATCACCAAAATGGACAAGGCGTCGATAATAAAAGACGCGATCGAGTACATCCAAGAGCTGCGAGCGCAAGAGAAGAGAATCGAATCGGAGATTTCAGATCTGGAATCAGGCAAAATCGAGAACAGAACAACAAATGAAGAAGACGACGACCATAACGGCAGTGGAATCTCCAAGAAGAGAATGAACAATTGTAATCGACAAGTACGAGAGAAGCCATCCTCAATCCCGATCGAAATTCTCGATTTGAGCGTGAATTACATGGGAGAGAAAACGATGGTGGTGAGTTTGACGTGCGGAAGAAGAAGCGACGCGGTATTAAAAGTTAGTCAAGTAATTGAATCGCTGAAGCTTAAGATTATTACGGCCAATATCATCGTCGTTGCCAACAGAGTTTTGAATACGCTCTTCCTTGAGGCAGAGAGAGCAGAGGAAGAGGAACTTAAGGTAAAAATAGAAAGAGCCATTGCAGCAATTAGTGATCAACAAAGCCCTATGAGCATTTAA | 735 | 44.9 | MENILDEYGYYWETNMFLQTQEFDSWGLDEAFYGSYDSSSPDGTLSSLEASKNILSERNRRKKLNDRLLALRAVVPNITKMDKASIIKDAIEYIQELRAQEKRIESEISDLESGKIENRTTNEEDDDHNGSGISKKRMNNCNRQVREKPSSIPIEILDLSVNYMGEKTMVVSLTCGRRSDAVLKVSQVIESLKLKIITANIIVVANRVLNTLFLEAERAEEEELKVKIERAIAAISDQQSPMSI | 244 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 25188406 | 25196543 | - | CePI673135_11g012090.1 | Cec11g1209 | 216421 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec11g1209 | 244 | SMART | finulus | 54 | 103 | IPR011598 | GO:0046983(InterPro) | |
Cec11g1209 | 244 | Coils | Coil | 202 | 234 | - | - | |
Cec11g1209 | 244 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 48 | 97 | IPR011598 | GO:0046983(InterPro) | |
Cec11g1209 | 244 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 53 | 114 | IPR036638 | GO:0046983(InterPro) | |
Cec11g1209 | 244 | Gene3D | - | 47 | 114 | IPR036638 | GO:0046983(InterPro) | |
Cec11g1209 | 244 | Coils | Coil | 87 | 114 | - | - | |
Cec11g1209 | 244 | MobiDBLite | consensus disorder prediction | 110 | 138 | - | - | |
Cec11g1209 | 244 | Pfam | Helix-loop-helix DNA-binding domain | 54 | 98 | IPR011598 | GO:0046983(InterPro) | |
Cec11g1209 | 244 | PANTHER | TRANSCRIPTION FACTOR SCREAM2-RELATED | 49 | 225 | IPR051358 | GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER) | |
Cec11g1209 | 244 | MobiDBLite | consensus disorder prediction | 110 | 133 | - | - | |
Cec11g1209 | 244 | FunFam | Basic helix-loop-helix (BHLH) DNA-binding superfamily protein | 45 | 116 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec08g1223 | Cec-Chr8:24160848 | Cec11g1209 | Cec-Chr11:25188406 | 1.60E-11 | dispersed | |
Cec10g0170 | Cec-Chr10:1673160 | Cec11g1209 | Cec-Chr11:25188406 | 1.20E-10 | dispersed | |
Cec11g1048 | Cec-Chr11:19667171 | Cec11g1209 | Cec-Chr11:25188406 | 1.10E-10 | dispersed | |
Cec11g1209 | Cec-Chr11:25188406 | Cec11g1540 | Cec-Chr11:29671983 | 1.80E-12 | dispersed | |
Cec02g2271 | Cec-Chr2:40060324 | Cec11g1209 | Cec-Chr11:25188406 | 5.30E-17 | transposed | |
Cec05g2764 | Cec-Chr5:38087012 | Cec11g1209 | Cec-Chr11:25188406 | 6.90E-19 | transposed | |
Cec10g1370 | Cec-Chr10:27966263 | Cec11g1209 | Cec-Chr11:25188406 | 1.30E-11 | transposed | |
Cec11g1209 | Cec-Chr11:25188406 | Cec06g1568 | Cec-Chr6:29284668 | 2.10E-61 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
30542 | PF00010 | HLH | 7.40E-11 | No_clan | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec11g1209 | - | - | - | 0.0 |