Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g1242 ATGGGAAACGACACCGCTTTAACTCTCGAAGAGATCAAGAACGAGACTGTTGATCTGGAGAAAATTCCTATTGAAGAAGTGTTTGAGCAGCTGAAATGTACAAGAGAAGGTTTAAGTTCTCAAGAAGGGGAGAACCGTCTTCAAATCTTTGGTCCCAACAAGCTAGAAGAGAAAAAGGAAAGCAAGATTCTGAAGTTTCTTGGGTTTATGTGGAATCCTCTTTCTTGGGTCATGGAAGCTGCAGCAATCATGGCCATTGCCTTGGCCAACGGTGGCGGCCGGGGACCGGATTGGCAGGACTTTGTCGGTATTGTCTGTCTGTTGGTTATCAACTCCACCATCAGTTTCATTGAAGAGAACAATGCTGGTAATGCAGCAGCTGCTCTTATGGCTGGTCTTGCACCTAAGACTAAGGTTCTAAGGGATGGAAAATGGTGTGAACAAGATGCATCAATTCTAGTACCAGGAGATGTGATCAGTGTGAAATTGGGAGACATCATCCCGGCCGATGCTCGTCTTCTCGAGGGTGATCCGTTAAAGGTTGATCAATCCGCCTTAACTGGAGAATCACTTCCTGTAACCAAGAATCCAGGGGATGAAGTTTTCTCTGGCTCAACTTGCAAACAAGGAGAAATTGAAGCGGTTGTTATTGCTACTGGTGTCCACACCTTCTTTGGAAAAGCAGCTCATCTTGTTGATAGCACTAACCAAGTTGGACACTTCCAAAAGGTTCTCACTGCCATTGGGAACTTCTGTATTTGCTCCATTGCCATTGGTATGTTGATTGAGATCCTCGTCATGTACCCAATCCAACACCGTGCCTACAGAGACGGAATTGACAACCTTTTGGTTCTCTTGATTGGAGGCATTCCAATTGCTATGCCTACTGTCTTGTCTGTGACCATGGCTATTGGTTCTCACAAGCTGTCCCAACAAGGTGCTATCACCAAGAGAATGACTGCTATAGAAGAAATGGCCGGTATGGACGTTCTTTGCAGTGACAAAACCGGAACGCTGACTCTTAACAAGTTGAGTGTTGACAAGAACTTGATTGAGGTATTTGCCAAGGGCGTAGACAAAGAACATGTCATTCTTCTTGCTGCAAGAGCTTCTAGGACTGAAAACCAGGATGCAATTGATGCTGCCATGGTTGGAATGCTCGCTGACCCGAAAGAGGCAAGAGCTGGAATTAGAGAAATTCACTTCTTCCCATTTAACCCTGTGGATAAGAGAACTGCTTTGACTTACATTGATTCCAATGGAAACTGGCACCGTGCTAGCAAAGGTGCTCCCGAACAGATCTTGACTCTTTGCAACTGCAAAGAAGACTTCAAGAGGAAGGTGTTTTCTGTTATTGACAAGTTTGCCGAGCGTGGACTTCGATCATTGGCTGTTGCTAGACAGGAAGTGCCTGAGAAGACTAAGGAGAGTCCTGGTGCACCATGGCAATTTGTTGGTTTGTTGCCTCTTTTCGATCCTCCTAGACACGATAGTGCAGAAACTATTCGCAGGGCTCTCAACTTGGGTGTGAATGTCAAGATGATTACTGGTGATCAACTTGCTATTGCAAAGGAAACCGGTCGAAGACTTGGAATGGGAACAAATATGTATCCATCTTCTTCCTTACTTGGCCAGCACAAGGACGAAAGCATTGCTGGACTTCCAGTTGAAGAGTTGATTGAGAAGGCTGATGGATTTGCTGGAGTGTTTCCAGAACACAAGTACGAAATCGTAAAGAAGTTGCAAGAGAGAAAGCACATTTGTGGAATGACAGGAGATGGTGTGAATGATGCCCCTGCTTTGAAGAAGGCAGACATTGGTATTGCTGTTGCTGATGCTACTGATGCAGCACGAGGTGCGTCCGACATCGTCCTTACTGAGCCTGGTTTGAGTGTTATCATCAGCGCCGTGTTGACCAGCAGGGCAATCTTCCAGAGGATGAAGAACTATACTATCTATGCAGTTTCCATCACTATTCGTATTGTGTTTGGTTTCATGTTGATTGCCCTCATCTGGAAGTTTGATTTCTCTCCCTTCATGGTTTTGATTATTGCTATCCTGAATGATGGTACAATTATGACAATCTCAAAGGACAGGGTGAAGCCATCTCCATTACCTGACAGTTGGAAACTGAAGGAGATTTTTGCAACTGGAGTAGTACTTGGAGGATACTTGGCATTGATGACGGTTATATTCTTTTGGTTAATGGACGGAACGGACTTCTTTTCGGATAAATTCGGTGTAAGATCGATCCGTGGTAATGAAGATGAAAAGATGGCTGCATTGTACCTTCAAGTGAGTATTGTCAGCCAGGCTTTGATTTTTGTAACTAGATCGCGCGGCTGGTCGTATGTCGAGCGACCTGGACTTCTATTAGTGGGCGCTTTCTTGGTTGCACAACTGGTTGCAACTTTGATCGCAGTATATGCAAACTGGGGATTCGCAAAGATCAAGGGAATTGGATGGGGATGGGCCGGTGTCATCTGGCTTTACAGCATTGTTTTCTACATTCCACTCGATATCATGAAGTTTGCTATTCGATACATATTGAGCGGAAAGGCATGGCTAAACTTGTTAGAAAACAAGACTGCTTTCACCACCAAGAAAGACTATGGAAAAGAGGAAAGAGAAGCTCAATGGGCCCTTGCTCAAAGGACATTACATGGACTTCAACCACCCGAGTCGACAAACATCTTCTCCGAAAAGAGCAGCTACAGAGAACTCTCCGAGATCGCAGAGCAAGCCAAGAGACGTGCTGAGATTGCAAGGCTCCGAGAGCTCAACACACTCAAAGGACACGTCGAGTCGGTGGTGAAGTTGAAGGGACTCGACATCGACACTATCCAACAACACTACACAGTGTGA 2865 45.27 MGNDTALTLEEIKNETVDLEKIPIEEVFEQLKCTREGLSSQEGENRLQIFGPNKLEEKKESKILKFLGFMWNPLSWVMEAAAIMAIALANGGGRGPDWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWCEQDASILVPGDVISVKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAIGMLIEILVMYPIQHRAYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVDKEHVILLAARASRTENQDAIDAAMVGMLADPKEARAGIREIHFFPFNPVDKRTALTYIDSNGNWHRASKGAPEQILTLCNCKEDFKRKVFSVIDKFAERGLRSLAVARQEVPEKTKESPGAPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGQHKDESIAGLPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGGYLALMTVIFFWLMDGTDFFSDKFGVRSIRGNEDEKMAALYLQVSIVSQALIFVTRSRGWSYVERPGLLLVGAFLVAQLVATLIAVYANWGFAKIKGIGWGWAGVIWLYSIVFYIPLDIMKFAIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPESTNIFSEKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTIQQHYTV 954
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 25962783 25968745 - CePI673135_11g012420.1 Cec11g1242 216454
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cec11g1242 954 Gene3D - 329 628 IPR023214 -
Cec11g1242 954 CDD P-type_ATPase_H 37 844 IPR006534 GO:0008553(InterPro)|GO:0016020(InterPro)|GO:0120029(InterPro)
Cec11g1242 954 PRINTS H+-transporting ATPase (proton pump) signature 448 466 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cec11g1242 954 PRINTS H+-transporting ATPase (proton pump) signature 591 607 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cec11g1242 954 PRINTS H+-transporting ATPase (proton pump) signature 563 579 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cec11g1242 954 PRINTS H+-transporting ATPase (proton pump) signature 622 647 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cec11g1242 954 PRINTS H+-transporting ATPase (proton pump) signature 763 784 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cec11g1242 954 SMART Cation_ATPase_N_a_2 18 90 IPR004014 -
Cec11g1242 954 ProSitePatterns E1-E2 ATPases phosphorylation site. 334 340 IPR018303 -
Cec11g1242 954 NCBIfam HAD-IC family P-type ATPase 566 679 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cec11g1242 954 NCBIfam HAD-IC family P-type ATPase 104 351 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cec11g1242 954 FunFam Plasma membrane ATPase 484 639 - -
Cec11g1242 954 SUPERFAMILY Calcium ATPase, transduction domain A 135 232 IPR008250 -
Cec11g1242 954 Gene3D - 135 219 - -
Cec11g1242 954 Pfam haloacid dehalogenase-like hydrolase 328 605 - -
Cec11g1242 954 FunFam Plasma membrane ATPase 135 219 - -
Cec11g1242 954 Gene3D - 903 954 - -
Cec11g1242 954 PANTHER CALCIUM-TRANSPORTING ATPASE 20 878 - GO:0005886(PANTHER)|GO:0008553(PANTHER)|GO:0015662(PANTHER)|GO:0016021(PANTHER)|GO:0034220(PANTHER)|GO:0051453(PANTHER)|GO:1902600(PANTHER)
Cec11g1242 954 SUPERFAMILY Calcium ATPase, transmembrane domain M 18 850 IPR023298 -
Cec11g1242 954 Gene3D - 97 818 - -
Cec11g1242 954 FunFam ATPase 4 plasma membrane-type 577 818 - -
Cec11g1242 954 Gene3D - 344 491 IPR023299 GO:0000166(InterPro)
Cec11g1242 954 SFLD p-type atpase 314 642 IPR044492 -
Cec11g1242 954 Pfam E1-E2 ATPase 134 311 - -
Cec11g1242 954 Coils Coil 905 925 - -
Cec11g1242 954 NCBIfam plasma-membrane proton-efflux P-type ATPase 37 809 IPR006534 GO:0008553(InterPro)|GO:0016020(InterPro)|GO:0120029(InterPro)
Cec11g1242 954 SUPERFAMILY HAD-like 328 638 IPR036412 -
Cec11g1242 954 FunFam Plasma membrane ATPase 344 491 - -
Cec11g1242 954 PRINTS P-type cation-transporting ATPase superfamily signature 486 497 - -
Cec11g1242 954 PRINTS P-type cation-transporting ATPase superfamily signature 591 610 - -
Cec11g1242 954 PRINTS P-type cation-transporting ATPase superfamily signature 508 518 - -
Cec11g1242 954 PRINTS P-type cation-transporting ATPase superfamily signature 614 626 - -
Cec11g1242 954 PRINTS P-type cation-transporting ATPase superfamily signature 182 196 - -
Cec11g1242 954 PRINTS P-type cation-transporting ATPase superfamily signature 332 346 - -
Cec11g1242 954 Pfam Cation transporter/ATPase, N-terminus 21 84 IPR004014 -
Cec11g1242 954 SFLD Haloacid Dehalogenase 314 642 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g1931 Cec-Chr5:31385969 Cec11g1242 Cec-Chr11:25962783 0.00E+00 dispersed
Cec08g1307 Cec-Chr8:25022800 Cec11g1242 Cec-Chr11:25962783 0.00E+00 dispersed
Cec09g1953 Cec-Chr9:36534476 Cec11g1242 Cec-Chr11:25962783 0.00E+00 dispersed
Cec11g1193 Cec-Chr11:24541914 Cec11g1242 Cec-Chr11:25962783 3.70E-41 dispersed
Cec11g1242 Cec-Chr11:25962783 Cec02g0847 Cec-Chr2:10335609 1.20E-06 dispersed
Cec06g1393 Cec-Chr6:27413840 Cec11g1242 Cec-Chr11:25962783 0.00E+00 transposed
Cec07g1361 Cec-Chr7:29215702 Cec11g1242 Cec-Chr11:25962783 0.00E+00 transposed
Cec11g0369 Cec-Chr11:3877999 Cec11g1242 Cec-Chr11:25962783 0.00E+00 transposed
Cec11g1242 Cec-Chr11:25962783 Cec06g1549 Cec-Chr6:29026071 0.00E+00 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g1242 K01535 - csv:101221564 1810.42