Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g1250 ATGATGGGATCTTTAGTGGTGGCGGAATACAATGTGTCCTTTATTGGCTTGAGGACTTTCACCATGGCTGCTGATTCTTCCTTTGATGGTGCTATTTTCGACTCGCCAAAATCTAGTAAGTTGACTATGCACGAGAAGAGAGAACTTGTATATGAAATTTCAAAGTCACATGGTGCAAGTGAGACACTGCAGTCATGGAGCCGTCAAGACATTCTACAAGTCCTGTGTGCAGAGATGGGGAAAGAAAGAAAATATACAGGCTTGACGAAGCAGAAAATAATAGAGCATCTTTTGAGACTCATATCCGAAAAGAAGTCATCCGTGCCTGAGGTTTTGAAAAACCTTGAGCCACAGTCTCCTGCAGGTGGCCATAAAAATACCAAAAGGCAGAGGAAATCTGAGCATCTAGCTCAACTTTCTGTTCCTGCAAATGACTTTCCAACCAGTAGTTCCCATAATGATTCGGGTCATATGGCTTGCTGCAAAAACTTGGCTTGTCGGGCGACTCTGAGTCCTGAAGATGCTTTTTGTAGAAGGTGTTCATGTTGCATCTGTCGTCAGTATGATGATAACAAGGATCCTAGCTTGTGGATAAGTTGCAGTGCGGAGCCTCCATTTCAAGGTGACTCATGCAACATGTCATGTCATCTTGAATGTGCTTTAAAAGATGAAAGATCAGGAATTTCGAAAGCCGGACGAAGCAGGGGAATTGATGGGAGCTTCTACTGTGTTTCTTGTGGGAAATTAAATGATTTGCTTGGGTGCTGCAGAAAACAACTAGTTCATGCAAAAGATACAAGAAGGGTCGACATACTGTGTTATCGTGTTTCTTTGAGTCAAAAGCTTCTCCATGGAACTGAGAAGTATAAAGTGCTTTATCAGATTGTTGATGAGTCTGTGAGGAAGCTTGAAGCTGAAGTGGGACCAATAGCCGGTGTACCGGTAAAGATGGGTAGAGGTATTGTAAACAGGCTTTCGTCTGGACCCGAAGTTCAAAAACTCTGTGCTTCTGCTATTGAGTTACTGGACTCAATGATCTCCAGCAATTCCTTGCACCTTTCGCCTAATCCTGACATTCAAGATGCAAATTTTGTTCCTGCAAACATGGTTAGATTTGAAGATGTTCAGTCAACATCCCTCACTCTAGTTTTGAGTTGTGAAAATGGATCCTCTGAGAACCAGGTCGGCTTCACCTTATGGCATCGTAAGGCAGATGATGCAGATTACCCGGCAGAACCGACATATATTCTACGACAACCGAAGGCGAGGTGTGCTGTGATGGGACTATCACCTGCTACTAAATATCATTTCAAAATTGTTCAGTTTGAGGGGACAAGGGAGTTGAGGGAGTTTGAAGTGCAGTTCTCAACAATTAGGGAGGAAGAAAACCCAGGCTGTTTAGAAATTGAAAGAAGCCAAAGCCACGCAACCAACTGTAGCGACCTTTCTAATCCTTCTTCGGTTGAAGACGAAACTACCGACATTCTTCCCTATGGTGATCGAACCGATAACCTAGGAAAAAACTCCACTGCCTATTCAAAGGGCGCCGAAATGCTTTCCTCGGCTATCTTATCGACTGATGCTTTTAACCTCAGTGACAATGGTGAAGAAGGAACACCTGCGGGAACAGTTTCTGTGTTGGATGAGGCAAATGCTGCAGGAATGGTAGGTTTGATCCCCAGTTCTGTTGCATCAAAGCTCGAGAACAGGCATGGACCAACTGCCCCAAAACTCAACACCGATAATCAGTTAAACGCCCTTGTTCGATCTGGTATGGAGCGCCAGCCATTTGTTGGCTGTTCTTCAGATGGCTTGCCTATTACTCCCTGCAAGCTTGAAGTGCTAAAGGACAGTCTTGGTAGAGGTGAGAGACCAAAATCCGGCTGCAAGGATCTCGACAATAGGACTCGAAAAGGAGGGGAACCCCAAGACGGCGGCACGTCAAAGATGCGAACTGGGGAAAGACAGGACGACAAATGTGCTGAAAATGGTGTTTCAGATCGGGATTTCGAGCATTATGTGAAGGTCATTAGATGGTTAGAATGCGAGGGTCATATTGAAAAAAATTTCAGGCAGAAATTTCTTACTTGGTACAGCTTGAGAGCATCCCAACAAGAAGTGAAGATTGTGAAGGTGTTTGTTGATACCTTTATTGAAGATCCAGCATCTCTTGCAGAGCAACTTGTAGATACTTTTTCTGAATGCATTTCGAGCAAAAAACCGACGACTATGCCGCCCGGGTTCTGCATGAAGCTGTGGCACTGA 2265 44.42 MMGSLVVAEYNVSFIGLRTFTMAADSSFDGAIFDSPKSSKLTMHEKRELVYEISKSHGASETLQSWSRQDILQVLCAEMGKERKYTGLTKQKIIEHLLRLISEKKSSVPEVLKNLEPQSPAGGHKNTKRQRKSEHLAQLSVPANDFPTSSSHNDSGHMACCKNLACRATLSPEDAFCRRCSCCICRQYDDNKDPSLWISCSAEPPFQGDSCNMSCHLECALKDERSGISKAGRSRGIDGSFYCVSCGKLNDLLGCCRKQLVHAKDTRRVDILCYRVSLSQKLLHGTEKYKVLYQIVDESVRKLEAEVGPIAGVPVKMGRGIVNRLSSGPEVQKLCASAIELLDSMISSNSLHLSPNPDIQDANFVPANMVRFEDVQSTSLTLVLSCENGSSENQVGFTLWHRKADDADYPAEPTYILRQPKARCAVMGLSPATKYHFKIVQFEGTRELREFEVQFSTIREEENPGCLEIERSQSHATNCSDLSNPSSVEDETTDILPYGDRTDNLGKNSTAYSKGAEMLSSAILSTDAFNLSDNGEEGTPAGTVSVLDEANAAGMVGLIPSSVASKLENRHGPTAPKLNTDNQLNALVRSGMERQPFVGCSSDGLPITPCKLEVLKDSLGRGERPKSGCKDLDNRTRKGGEPQDGGTSKMRTGERQDDKCAENGVSDRDFEHYVKVIRWLECEGHIEKNFRQKFLTWYSLRASQQEVKIVKVFVDTFIEDPASLAEQLVDTFSECISSKKPTTMPPGFCMKLWH 754
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 26181083 26185347 - CePI673135_11g012500.1 Cec11g1250 216462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g1250 754 PANTHER VIN3-LIKE PROTEIN 2-RELATED 34 754 IPR044514 GO:0010048(InterPro)|GO:0040029(InterPro)
Cec11g1250 754 Pfam PHD - plant homeodomain finger protein 161 281 IPR032881 -
Cec11g1250 754 ProSiteProfiles Fibronectin type-III domain profile. 365 461 IPR003961 GO:0005515(InterPro)
Cec11g1250 754 MobiDBLite consensus disorder prediction 477 491 - -
Cec11g1250 754 MobiDBLite consensus disorder prediction 477 502 - -
Cec11g1250 754 MobiDBLite consensus disorder prediction 621 662 - -
Cec11g1250 754 MobiDBLite consensus disorder prediction 113 150 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g1183 Cec-Chr6:24118965 Cec11g1250 Cec-Chr11:26181083 3.30E-93 dispersed
Cec11g0269 Cec-Chr11:2890898 Cec11g1250 Cec-Chr11:26181083 2.10E-93 dispersed
Cec08g1192 Cec-Chr8:23839873 Cec11g1250 Cec-Chr11:26181083 7.90E-113 transposed
Cec11g1250 Cec-Chr11:26181083 Cec06g1544 Cec-Chr6:28961716 4.70E-216 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g1250 - - - 0.0