Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec11g1300 | ATGATGATTCGAACGTTTAACCTCTCGACAAAGGTAAGGTACAAAGGAGTTTTCCCTTTGGCCGATTTCCCTTCTCTTTCCTTCCCTCCGCCTTCGACAATCGACACCGTCATCTCCGTTCTTCAATTCTTCCTCCTCTCAATCTTCTCATCTTCCTCACCTCACCGTTTGCTGCTTTCTTCCCTCACCGTCGATCTCCCTCCACTCCGTCGATCACCCTCACGCCGTTTCTCTAATTCCACTCCATCGATCTCCCTCACGCCGCCTCTCTCATCCACTCTCTCGATTTCCACTGGCAGTTTGTCCAAACTCCCAAGGGCCTCAGGCTTAGTTATTCATCAGTGTAAGGATGTTTTTTTGATTCCTTATGATGTGCAAATGGATTTGGGGAAACGGACGAATTTGATGGATAGCCCTTTGACGCGGAGCTCTACCCCTAATTCCTCACCTATCTCAAATCCTGGTTCAAATGATGAAAGCCCACGTGTTAAATTCCTGTGCAGCTTCTTGGGAAGTATAATGCCTCGCCCCCAAGATGGCAAGCTTCGGTATGTTGGGGGAGAGACGAGGATTGTGAGTGTTCAGAGGGATATTACATATGAGGAGTTAATGATTAAGATGAGGGAACTTTATGATGGGGCTACAGTGTTGAAGTACCAGCAACCAGATGAGGATCCTGATGCTCTTGTGTCTGTTGTCAATGATGATGATGTGATTAACATGATGGAAGAGTATGATAAGGTGGGTTCTGGTGACGGGTTCACTAGGCTGAGGATATTCTTGTTTTCACATCCTGAACAAGATGGTTCTTTGCCCTTTGTGGATGGTGATGAGAGGGATACTGAAAGGCGATATGTAGATGCTCTTAATAATTCGAATGACATGAATGATTTTGTTAGACAACAACAGCTAAATTCCCCTGCAATTAGTGGCATAGATGATATGCACGGGAATGAACATTTTTTGAACCCAATGAATATTGAAGGTAGTCTTCACACTCAGAGGAGTTGTGAGCCCTTGTCACAATATCATCTGCATCAGCTCACAATCCCCCATGTTGGGTCTGGGGGGCAACAACAATCTGTGGCCCAAAGGTATAGTGAAATGGAAGCTCCATGGAGTCCTGCTTTCCTTTCACCCAGGCATCATGGTCCATATGATTCAAGAACGATGGGTGAATATCCATCTTCTCCATTTGCACGATACCGTATGCCATTCCCAGATTTGCCAGATAAATATTTGGAAAGAATGCCTGAAGACTATGTCAGGCAGCAAATGAATCACCAACATATGTATGAACATCAACCACAATATAACGAGAATATTGTATGGCTGCCAAATGGAACAACTAGTGAAGAGTCAGGTTTCCCAGGTAATATATTACATGGACATGGTGTTCTAGATGGGAATAGTTCTTGTGAACACTGTCGGGCAAATTTTCATCGGTATCAAACACACATGGAACAAGCTAATACGATAAATGGACTTCCCCCTGAATACCCTCAGAATAGAGAGGCCTTGATGCAGAAGGCAGACACGAAGTTCCATCATGGTATTTTTCCAAATGAGCAGAATATTAATGATCTTCGATCTACTTATAATGAGACACCACCCCATGAGAAAGGATGGATTATGCAACACCAGGTGAGTGTGCGAGGGGATGACACGAGAACACATGTTTCTGGTGCTGGACGATTGAATGATCACTACATTGTGGATGGTTCCGGCTCAAATTTTCCTCCTACACAAAGTAATATAACTGATGGCTACCATGCTTCCACAAATTTTCATGATGAGGGATTTCGTGATCAGGTTGTGCCTAGTGGGCAACATATGTGTGTTCCTCCTCCAGAAGATCGTGGTGTTGGTTATATGCCTTATGGATATGGAGGAGATCCTCATTATCCTCCAATGTCACAAAGGCATATGCCTGGAAATGCCTCTTGGCGAAATGTTCAGAATCCATTACATGTTGCTCCCACTTATGAAGCATCTGTTTTCCTTCAACAAGGGAATGCGAGCATAAATCCAGGATATATCAAAGCCATGCAGGATGGTAGTCCACGAATTCATATCGGTATGGACCACCAAAATCCTTGGCATGAATCCTCACAAAAAATTTTGGGTATTGAGGGTGCAACTGGTTCAGAGCATTTACCTGGACATGTCTTGAAGACTAACTCGACTGCGGTTGGCCATGACAATCAACACTTAACAAGTTTAGAACATATCCAACCACATCTAGATAAGATAAACCTTGTTGCTTCTCCTATGCAGAGGTCAGATTCATCTTCACCATTTATTCATGAAAAAAAAATGGTTGCACCTTTTCATCCTAGCCAAAATCCGCAACCGAGGGCTGTTAGTGTGGTTAATGAAGCTATGCTGATGGAAAGAAAAGTTGTGCATGGGGAAGGAAATGGACACATGATTAACGATACAGGGAAAGTTGACATCTCTGAAGCACACATTGTTTCTCATCCCGGGCAAAATAACACTGATGATACATATTCCAAGGTTGCGCCCCTTGAATCGCTAAATTCAACTTGCATGAACTCTGCAGTAGAAAATGGTGATGGCCTGAAACCTTCTGCAGAGACTCTTGAAAAGCCTAAACTATCAGTCAGCCGTCTGAGTTTCTTACCTGAGTTGATTGCATCTGTGAAAAGAGCAGCACTAGAAGTATCTGAAGAGGCAATGGTTGAAGAAACCCCTCAAAGGGGTCCTGATTCAATAGGAAAAAAAGAGACAACAAATGAGCAACATTCCTCGAATGCCCATGGGGAACCTGAGTTGGAAACTGAGAGTGACAATCAAAGCTCTGAAATTGAGCCAACAAAAGCTGAAGAGGAAGCCATTTCAAGAGGATTACAAACAATTAAAAATGATGATCTGGAGGAGATTCGTGAACTAGGGTCTGGGACTTATGGTGCTGTTTATCATGGGAAATGGAGAGGTTCTGATGTTGCAATAAAGAGGATCAAAGCTAGCTGTTTTGCTGGACGGCCTTCGGAAAGGGAACGTTTGATTGCAGATTTTTGGAAGGAAGCTTTGATATTAAGTTCTTTACACCATCCAAATGTTGTTTCCTTCTATGGTATTGTTCGTGATGGTCCTGATGGTTCCTTAGCAACAGTGACAGAATTCATGGTTAATGGATCATTGAAGCAGTTTTTACACAAGAAGGACAGGACCATCGATCGTCGTAAGAGACTCATTATAGCTATGGATGCTGCATTTGGGATGGAATATTTGCATGGGAAGAATATTGTACATTTTGATTTGAAATGCGAAAACCTTTTAGTGAATATGAGAGACCCTCAGAGGCCTGTATGCAAGATTGGTGATTTGGGATTGTCAAAGGTGAGACAACACACGTTAGTGTCAGGAGGGGTTCGTGGAACTTTGCCCTGGATGGCACCGGAGCTTCTTAGTGGGAAAAGTAACATGGTGACAGAGAAGATCGATGTTTACTCATTTGGGATTGTTATGTGGGAACTACTCACAGGAGATGAACCATATTCAGATATGCATTGTGCTTCTATAATTGGAGGAATTGTGAACAATTGTTTACGCCCTGAAATTCCGACATGGTGCGATCCAGAATGGAAGGCTTTAATGTCAAGCTGTTGGGACTCGGACCCAGCTAAGAGACCATCATTTTCAGAAATTTCTCAGAAGCTAAGGAATATGGCAGCTGCAATGAATAGACTGCATTGCTGGGAGACTACAAGTACAGATATGAAGGAGATCCATGTAGGCAATGGGAATGATTTCACTTGGGATTCTGCCGTTGGAAGCGTACGCCATACAGTAATGATACAATACATATATATGTTGGTTCTGCTATAA | 3852 | 43.07 | MMIRTFNLSTKVRYKGVFPLADFPSLSFPPPSTIDTVISVLQFFLLSIFSSSSPHRLLLSSLTVDLPPLRRSPSRRFSNSTPSISLTPPLSSTLSISTGSLSKLPRASGLVIHQCKDVFLIPYDVQMDLGKRTNLMDSPLTRSSTPNSSPISNPGSNDESPRVKFLCSFLGSIMPRPQDGKLRYVGGETRIVSVQRDITYEELMIKMRELYDGATVLKYQQPDEDPDALVSVVNDDDVINMMEEYDKVGSGDGFTRLRIFLFSHPEQDGSLPFVDGDERDTERRYVDALNNSNDMNDFVRQQQLNSPAISGIDDMHGNEHFLNPMNIEGSLHTQRSCEPLSQYHLHQLTIPHVGSGGQQQSVAQRYSEMEAPWSPAFLSPRHHGPYDSRTMGEYPSSPFARYRMPFPDLPDKYLERMPEDYVRQQMNHQHMYEHQPQYNENIVWLPNGTTSEESGFPGNILHGHGVLDGNSSCEHCRANFHRYQTHMEQANTINGLPPEYPQNREALMQKADTKFHHGIFPNEQNINDLRSTYNETPPHEKGWIMQHQVSVRGDDTRTHVSGAGRLNDHYIVDGSGSNFPPTQSNITDGYHASTNFHDEGFRDQVVPSGQHMCVPPPEDRGVGYMPYGYGGDPHYPPMSQRHMPGNASWRNVQNPLHVAPTYEASVFLQQGNASINPGYIKAMQDGSPRIHIGMDHQNPWHESSQKILGIEGATGSEHLPGHVLKTNSTAVGHDNQHLTSLEHIQPHLDKINLVASPMQRSDSSSPFIHEKKMVAPFHPSQNPQPRAVSVVNEAMLMERKVVHGEGNGHMINDTGKVDISEAHIVSHPGQNNTDDTYSKVAPLESLNSTCMNSAVENGDGLKPSAETLEKPKLSVSRLSFLPELIASVKRAALEVSEEAMVEETPQRGPDSIGKKETTNEQHSSNAHGEPELETESDNQSSEIEPTKAEEEAISRGLQTIKNDDLEEIRELGSGTYGAVYHGKWRGSDVAIKRIKASCFAGRPSERERLIADFWKEALILSSLHHPNVVSFYGIVRDGPDGSLATVTEFMVNGSLKQFLHKKDRTIDRRKRLIIAMDAAFGMEYLHGKNIVHFDLKCENLLVNMRDPQRPVCKIGDLGLSKVRQHTLVSGGVRGTLPWMAPELLSGKSNMVTEKIDVYSFGIVMWELLTGDEPYSDMHCASIIGGIVNNCLRPEIPTWCDPEWKALMSSCWDSDPAKRPSFSEISQKLRNMAAAMNRLHCWETTSTDMKEIHVGNGNDFTWDSAVGSVRHTVMIQYIYMLVLL | 1283 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 27014399 | 27026790 | - | CePI673135_11g013000.1 | Cec11g1300 | 216512 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec11g1300 | 1283 | PRINTS | Tyrosine kinase catalytic domain signature | 1199 | 1221 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec11g1300 | 1283 | PRINTS | Tyrosine kinase catalytic domain signature | 1155 | 1177 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec11g1300 | 1283 | PRINTS | Tyrosine kinase catalytic domain signature | 1047 | 1060 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec11g1300 | 1283 | PRINTS | Tyrosine kinase catalytic domain signature | 1084 | 1102 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec11g1300 | 1283 | MobiDBLite | consensus disorder prediction | 136 | 159 | - | - | |
Cec11g1300 | 1283 | CDD | PB1_UP2 | 166 | 262 | - | - | |
Cec11g1300 | 1283 | SUPERFAMILY | CAD & PB1 domains | 179 | 267 | - | - | |
Cec11g1300 | 1283 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 1090 | 1102 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec11g1300 | 1283 | SUPERFAMILY | Protein kinase-like (PK-like) | 952 | 1226 | IPR011009 | - | |
Cec11g1300 | 1283 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 143 | 1232 | IPR050167 | GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER) | |
Cec11g1300 | 1283 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1052 | 1264 | - | - | |
Cec11g1300 | 1283 | FunFam | Octicosapeptide/phox/Bem1p domain kinase superfamily protein | 1053 | 1244 | - | - | |
Cec11g1300 | 1283 | FunFam | Octicosapeptide/phox/Bem1p domain kinase superfamily protein | 958 | 1052 | - | - | |
Cec11g1300 | 1283 | CDD | STKc_MAP3K-like | 971 | 1228 | - | - | |
Cec11g1300 | 1283 | SMART | PB1_new | 177 | 262 | IPR000270 | GO:0005515(InterPro) | |
Cec11g1300 | 1283 | SMART | serkin_6 | 965 | 1234 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec11g1300 | 1283 | MobiDBLite | consensus disorder prediction | 135 | 160 | - | - | |
Cec11g1300 | 1283 | FunFam | Octicosapeptide/phox/Bem1p domain kinase superfamily protein | 182 | 264 | - | - | |
Cec11g1300 | 1283 | Pfam | Protein tyrosine and serine/threonine kinase | 967 | 1228 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec11g1300 | 1283 | Pfam | PB1 domain | 178 | 262 | IPR000270 | GO:0005515(InterPro) | |
Cec11g1300 | 1283 | ProSitePatterns | Protein kinases ATP-binding region signature. | 971 | 992 | IPR017441 | GO:0005524(InterPro) | |
Cec11g1300 | 1283 | ProSiteProfiles | Protein kinase domain profile. | 965 | 1242 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec11g1300 | 1283 | MobiDBLite | consensus disorder prediction | 896 | 959 | - | - | |
Cec11g1300 | 1283 | Gene3D | Phosphorylase Kinase; domain 1 | 951 | 1051 | - | - | |
Cec11g1300 | 1283 | Gene3D | - | 181 | 264 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec05g0407 | Cec-Chr5:3336970 | Cec11g1300 | Cec-Chr11:27014399 | 4.50E-141 | dispersed | |
Cec06g1382 | Cec-Chr6:27330117 | Cec11g1300 | Cec-Chr11:27014399 | 4.10E-139 | dispersed | |
Cec10g0691 | Cec-Chr10:9651814 | Cec11g1300 | Cec-Chr11:27014399 | 8.00E-30 | dispersed | |
Cec11g1300 | Cec-Chr11:27014399 | Cec11g1517 | Cec-Chr11:29376439 | 8.30E-48 | dispersed | |
Cec11g1300 | Cec-Chr11:27014399 | Cec01g1612 | Cec-Chr1:30762998 | 1.30E-48 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72412 | PF07714 | PK_Tyr_Ser-Thr | 1.20E-61 | CL0016 | Cec | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec11g1300 | - | - | - | 0.0 |