Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g1300 ATGATGATTCGAACGTTTAACCTCTCGACAAAGGTAAGGTACAAAGGAGTTTTCCCTTTGGCCGATTTCCCTTCTCTTTCCTTCCCTCCGCCTTCGACAATCGACACCGTCATCTCCGTTCTTCAATTCTTCCTCCTCTCAATCTTCTCATCTTCCTCACCTCACCGTTTGCTGCTTTCTTCCCTCACCGTCGATCTCCCTCCACTCCGTCGATCACCCTCACGCCGTTTCTCTAATTCCACTCCATCGATCTCCCTCACGCCGCCTCTCTCATCCACTCTCTCGATTTCCACTGGCAGTTTGTCCAAACTCCCAAGGGCCTCAGGCTTAGTTATTCATCAGTGTAAGGATGTTTTTTTGATTCCTTATGATGTGCAAATGGATTTGGGGAAACGGACGAATTTGATGGATAGCCCTTTGACGCGGAGCTCTACCCCTAATTCCTCACCTATCTCAAATCCTGGTTCAAATGATGAAAGCCCACGTGTTAAATTCCTGTGCAGCTTCTTGGGAAGTATAATGCCTCGCCCCCAAGATGGCAAGCTTCGGTATGTTGGGGGAGAGACGAGGATTGTGAGTGTTCAGAGGGATATTACATATGAGGAGTTAATGATTAAGATGAGGGAACTTTATGATGGGGCTACAGTGTTGAAGTACCAGCAACCAGATGAGGATCCTGATGCTCTTGTGTCTGTTGTCAATGATGATGATGTGATTAACATGATGGAAGAGTATGATAAGGTGGGTTCTGGTGACGGGTTCACTAGGCTGAGGATATTCTTGTTTTCACATCCTGAACAAGATGGTTCTTTGCCCTTTGTGGATGGTGATGAGAGGGATACTGAAAGGCGATATGTAGATGCTCTTAATAATTCGAATGACATGAATGATTTTGTTAGACAACAACAGCTAAATTCCCCTGCAATTAGTGGCATAGATGATATGCACGGGAATGAACATTTTTTGAACCCAATGAATATTGAAGGTAGTCTTCACACTCAGAGGAGTTGTGAGCCCTTGTCACAATATCATCTGCATCAGCTCACAATCCCCCATGTTGGGTCTGGGGGGCAACAACAATCTGTGGCCCAAAGGTATAGTGAAATGGAAGCTCCATGGAGTCCTGCTTTCCTTTCACCCAGGCATCATGGTCCATATGATTCAAGAACGATGGGTGAATATCCATCTTCTCCATTTGCACGATACCGTATGCCATTCCCAGATTTGCCAGATAAATATTTGGAAAGAATGCCTGAAGACTATGTCAGGCAGCAAATGAATCACCAACATATGTATGAACATCAACCACAATATAACGAGAATATTGTATGGCTGCCAAATGGAACAACTAGTGAAGAGTCAGGTTTCCCAGGTAATATATTACATGGACATGGTGTTCTAGATGGGAATAGTTCTTGTGAACACTGTCGGGCAAATTTTCATCGGTATCAAACACACATGGAACAAGCTAATACGATAAATGGACTTCCCCCTGAATACCCTCAGAATAGAGAGGCCTTGATGCAGAAGGCAGACACGAAGTTCCATCATGGTATTTTTCCAAATGAGCAGAATATTAATGATCTTCGATCTACTTATAATGAGACACCACCCCATGAGAAAGGATGGATTATGCAACACCAGGTGAGTGTGCGAGGGGATGACACGAGAACACATGTTTCTGGTGCTGGACGATTGAATGATCACTACATTGTGGATGGTTCCGGCTCAAATTTTCCTCCTACACAAAGTAATATAACTGATGGCTACCATGCTTCCACAAATTTTCATGATGAGGGATTTCGTGATCAGGTTGTGCCTAGTGGGCAACATATGTGTGTTCCTCCTCCAGAAGATCGTGGTGTTGGTTATATGCCTTATGGATATGGAGGAGATCCTCATTATCCTCCAATGTCACAAAGGCATATGCCTGGAAATGCCTCTTGGCGAAATGTTCAGAATCCATTACATGTTGCTCCCACTTATGAAGCATCTGTTTTCCTTCAACAAGGGAATGCGAGCATAAATCCAGGATATATCAAAGCCATGCAGGATGGTAGTCCACGAATTCATATCGGTATGGACCACCAAAATCCTTGGCATGAATCCTCACAAAAAATTTTGGGTATTGAGGGTGCAACTGGTTCAGAGCATTTACCTGGACATGTCTTGAAGACTAACTCGACTGCGGTTGGCCATGACAATCAACACTTAACAAGTTTAGAACATATCCAACCACATCTAGATAAGATAAACCTTGTTGCTTCTCCTATGCAGAGGTCAGATTCATCTTCACCATTTATTCATGAAAAAAAAATGGTTGCACCTTTTCATCCTAGCCAAAATCCGCAACCGAGGGCTGTTAGTGTGGTTAATGAAGCTATGCTGATGGAAAGAAAAGTTGTGCATGGGGAAGGAAATGGACACATGATTAACGATACAGGGAAAGTTGACATCTCTGAAGCACACATTGTTTCTCATCCCGGGCAAAATAACACTGATGATACATATTCCAAGGTTGCGCCCCTTGAATCGCTAAATTCAACTTGCATGAACTCTGCAGTAGAAAATGGTGATGGCCTGAAACCTTCTGCAGAGACTCTTGAAAAGCCTAAACTATCAGTCAGCCGTCTGAGTTTCTTACCTGAGTTGATTGCATCTGTGAAAAGAGCAGCACTAGAAGTATCTGAAGAGGCAATGGTTGAAGAAACCCCTCAAAGGGGTCCTGATTCAATAGGAAAAAAAGAGACAACAAATGAGCAACATTCCTCGAATGCCCATGGGGAACCTGAGTTGGAAACTGAGAGTGACAATCAAAGCTCTGAAATTGAGCCAACAAAAGCTGAAGAGGAAGCCATTTCAAGAGGATTACAAACAATTAAAAATGATGATCTGGAGGAGATTCGTGAACTAGGGTCTGGGACTTATGGTGCTGTTTATCATGGGAAATGGAGAGGTTCTGATGTTGCAATAAAGAGGATCAAAGCTAGCTGTTTTGCTGGACGGCCTTCGGAAAGGGAACGTTTGATTGCAGATTTTTGGAAGGAAGCTTTGATATTAAGTTCTTTACACCATCCAAATGTTGTTTCCTTCTATGGTATTGTTCGTGATGGTCCTGATGGTTCCTTAGCAACAGTGACAGAATTCATGGTTAATGGATCATTGAAGCAGTTTTTACACAAGAAGGACAGGACCATCGATCGTCGTAAGAGACTCATTATAGCTATGGATGCTGCATTTGGGATGGAATATTTGCATGGGAAGAATATTGTACATTTTGATTTGAAATGCGAAAACCTTTTAGTGAATATGAGAGACCCTCAGAGGCCTGTATGCAAGATTGGTGATTTGGGATTGTCAAAGGTGAGACAACACACGTTAGTGTCAGGAGGGGTTCGTGGAACTTTGCCCTGGATGGCACCGGAGCTTCTTAGTGGGAAAAGTAACATGGTGACAGAGAAGATCGATGTTTACTCATTTGGGATTGTTATGTGGGAACTACTCACAGGAGATGAACCATATTCAGATATGCATTGTGCTTCTATAATTGGAGGAATTGTGAACAATTGTTTACGCCCTGAAATTCCGACATGGTGCGATCCAGAATGGAAGGCTTTAATGTCAAGCTGTTGGGACTCGGACCCAGCTAAGAGACCATCATTTTCAGAAATTTCTCAGAAGCTAAGGAATATGGCAGCTGCAATGAATAGACTGCATTGCTGGGAGACTACAAGTACAGATATGAAGGAGATCCATGTAGGCAATGGGAATGATTTCACTTGGGATTCTGCCGTTGGAAGCGTACGCCATACAGTAATGATACAATACATATATATGTTGGTTCTGCTATAA 3852 43.07 MMIRTFNLSTKVRYKGVFPLADFPSLSFPPPSTIDTVISVLQFFLLSIFSSSSPHRLLLSSLTVDLPPLRRSPSRRFSNSTPSISLTPPLSSTLSISTGSLSKLPRASGLVIHQCKDVFLIPYDVQMDLGKRTNLMDSPLTRSSTPNSSPISNPGSNDESPRVKFLCSFLGSIMPRPQDGKLRYVGGETRIVSVQRDITYEELMIKMRELYDGATVLKYQQPDEDPDALVSVVNDDDVINMMEEYDKVGSGDGFTRLRIFLFSHPEQDGSLPFVDGDERDTERRYVDALNNSNDMNDFVRQQQLNSPAISGIDDMHGNEHFLNPMNIEGSLHTQRSCEPLSQYHLHQLTIPHVGSGGQQQSVAQRYSEMEAPWSPAFLSPRHHGPYDSRTMGEYPSSPFARYRMPFPDLPDKYLERMPEDYVRQQMNHQHMYEHQPQYNENIVWLPNGTTSEESGFPGNILHGHGVLDGNSSCEHCRANFHRYQTHMEQANTINGLPPEYPQNREALMQKADTKFHHGIFPNEQNINDLRSTYNETPPHEKGWIMQHQVSVRGDDTRTHVSGAGRLNDHYIVDGSGSNFPPTQSNITDGYHASTNFHDEGFRDQVVPSGQHMCVPPPEDRGVGYMPYGYGGDPHYPPMSQRHMPGNASWRNVQNPLHVAPTYEASVFLQQGNASINPGYIKAMQDGSPRIHIGMDHQNPWHESSQKILGIEGATGSEHLPGHVLKTNSTAVGHDNQHLTSLEHIQPHLDKINLVASPMQRSDSSSPFIHEKKMVAPFHPSQNPQPRAVSVVNEAMLMERKVVHGEGNGHMINDTGKVDISEAHIVSHPGQNNTDDTYSKVAPLESLNSTCMNSAVENGDGLKPSAETLEKPKLSVSRLSFLPELIASVKRAALEVSEEAMVEETPQRGPDSIGKKETTNEQHSSNAHGEPELETESDNQSSEIEPTKAEEEAISRGLQTIKNDDLEEIRELGSGTYGAVYHGKWRGSDVAIKRIKASCFAGRPSERERLIADFWKEALILSSLHHPNVVSFYGIVRDGPDGSLATVTEFMVNGSLKQFLHKKDRTIDRRKRLIIAMDAAFGMEYLHGKNIVHFDLKCENLLVNMRDPQRPVCKIGDLGLSKVRQHTLVSGGVRGTLPWMAPELLSGKSNMVTEKIDVYSFGIVMWELLTGDEPYSDMHCASIIGGIVNNCLRPEIPTWCDPEWKALMSSCWDSDPAKRPSFSEISQKLRNMAAAMNRLHCWETTSTDMKEIHVGNGNDFTWDSAVGSVRHTVMIQYIYMLVLL 1283
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 27014399 27026790 - CePI673135_11g013000.1 Cec11g1300 216512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g1300 1283 PRINTS Tyrosine kinase catalytic domain signature 1199 1221 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec11g1300 1283 PRINTS Tyrosine kinase catalytic domain signature 1155 1177 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec11g1300 1283 PRINTS Tyrosine kinase catalytic domain signature 1047 1060 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec11g1300 1283 PRINTS Tyrosine kinase catalytic domain signature 1084 1102 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec11g1300 1283 MobiDBLite consensus disorder prediction 136 159 - -
Cec11g1300 1283 CDD PB1_UP2 166 262 - -
Cec11g1300 1283 SUPERFAMILY CAD & PB1 domains 179 267 - -
Cec11g1300 1283 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1090 1102 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec11g1300 1283 SUPERFAMILY Protein kinase-like (PK-like) 952 1226 IPR011009 -
Cec11g1300 1283 PANTHER SERINE-THREONINE PROTEIN KINASE 143 1232 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Cec11g1300 1283 Gene3D Transferase(Phosphotransferase) domain 1 1052 1264 - -
Cec11g1300 1283 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1053 1244 - -
Cec11g1300 1283 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 958 1052 - -
Cec11g1300 1283 CDD STKc_MAP3K-like 971 1228 - -
Cec11g1300 1283 SMART PB1_new 177 262 IPR000270 GO:0005515(InterPro)
Cec11g1300 1283 SMART serkin_6 965 1234 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g1300 1283 MobiDBLite consensus disorder prediction 135 160 - -
Cec11g1300 1283 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 182 264 - -
Cec11g1300 1283 Pfam Protein tyrosine and serine/threonine kinase 967 1228 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec11g1300 1283 Pfam PB1 domain 178 262 IPR000270 GO:0005515(InterPro)
Cec11g1300 1283 ProSitePatterns Protein kinases ATP-binding region signature. 971 992 IPR017441 GO:0005524(InterPro)
Cec11g1300 1283 ProSiteProfiles Protein kinase domain profile. 965 1242 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g1300 1283 MobiDBLite consensus disorder prediction 896 959 - -
Cec11g1300 1283 Gene3D Phosphorylase Kinase; domain 1 951 1051 - -
Cec11g1300 1283 Gene3D - 181 264 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g0407 Cec-Chr5:3336970 Cec11g1300 Cec-Chr11:27014399 4.50E-141 dispersed
Cec06g1382 Cec-Chr6:27330117 Cec11g1300 Cec-Chr11:27014399 4.10E-139 dispersed
Cec10g0691 Cec-Chr10:9651814 Cec11g1300 Cec-Chr11:27014399 8.00E-30 dispersed
Cec11g1300 Cec-Chr11:27014399 Cec11g1517 Cec-Chr11:29376439 8.30E-48 dispersed
Cec11g1300 Cec-Chr11:27014399 Cec01g1612 Cec-Chr1:30762998 1.30E-48 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72412 PF07714 PK_Tyr_Ser-Thr 1.20E-61 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g1300 - - - 0.0