Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g1365 ATGGGAAAGCTTAGCTTGAACTGCTGTAATAGCTTCCTTGAGAATTCAAAACCTTATTTTGCCATGATATCCTTACAATTTGGATACGCTGGCATGAACATCATCTCTAAAGTCTCTCTTAGTAGAGGGATGAGTCATTACGTCCTCGTCGTTTATCGACATGCTTTCGCTACCGCTTCCATTGCTCCCTTCGTTCTCTTCTTCGAACGGGGAGGACAGCCAAGGATAACCCTCAAAGTTTTCATTCAAATATTTGTGTTGGCTTTGCTTGGCCCCGTTATCGATCAAAATTTCTACTATGCTGGGCTAAAATATACTTCACCAACTTTCTCTTGTGCCATGAGCAACATGCTGCCTGCAATGACATTTGTGATGGCTGTGATCTTTAGGATGGAAAAATTGGAGATGAAGAAATTGAGATGCCAAGCAAAAGTTTTGGGAACTTTAGTGTCAGTGGCTGGAGCAATGCTGATGACTTTATACAAAGGTCCACTTCTTCAAATGGCTTGGTCTAAAAATTCCCATATCACCAATTCTAATGAAACTTCCAACAACAAAGATTGGTTCAAAGGCTCCATTTTCCTCATCATTGCCACTCTTGCTTGGGCTTCTCTCTTTGTTTTGCAGAATGAGGCATTGAAGACATACAAGAACCATCAACTCACTCTCACCACACTCGTGTGTTTTCTTGGGACTTTGCAAGCCATAGCTGTGACTTTAGTAGCCGAGCACAAAGCTTCTGTTTGGACAATTGGTTGGGACATGAATCTTCTTGCTGCTGCCTATGCTGGAATTGTGACATCAAGTATTTCATACTATGTACAAGGGTTGGTGATGAAAAAGAGAGGACCTGTATTTACAACTGCATTTAGTCCTTTGATTATGATTCTTGTGGCCATCATGGGCTCTCTCATCCTTGCTGAAAAGATTTTTCTTGGAGGAATAATAGGATCCATCTTGATAGTGTTTGGGCTATATTCAGTACTTTGGGGAAAGCACAAAGAGAATTTGGAGATGATTAAAACTGCTGCTGTTGATGATGAAATACCAAAAGCAATTAAAGCTTCTTCTCAACCAAATAATAATAATAATAATAATAATAATAATAGTAATAGTAATAATAATAATATTGCAAATAATGTTGAAGCTAATGAGATTGTGACCATGGCACCCAATAAGCTAAGTTCCAATAATAATTCAATTTTCATTTCCATGCCTGCCCTTGAACACCCCATTAAACCCAACCAAATCCCAAGAGAATAA 1263 38.88 MGKLSLNCCNSFLENSKPYFAMISLQFGYAGMNIISKVSLSRGMSHYVLVVYRHAFATASIAPFVLFFERGGQPRITLKVFIQIFVLALLGPVIDQNFYYAGLKYTSPTFSCAMSNMLPAMTFVMAVIFRMEKLEMKKLRCQAKVLGTLVSVAGAMLMTLYKGPLLQMAWSKNSHITNSNETSNNKDWFKGSIFLIIATLAWASLFVLQNEALKTYKNHQLTLTTLVCFLGTLQAIAVTLVAEHKASVWTIGWDMNLLAAAYAGIVTSSISYYVQGLVMKKRGPVFTTAFSPLIMILVAIMGSLILAEKIFLGGIIGSILIVFGLYSVLWGKHKENLEMIKTAAVDDEIPKAIKASSQPNNNNNNNNNNSNSNNNNIANNVEANEIVTMAPNKLSSNNNSIFISMPALEHPIKPNQIPRE 420
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 27912721 27916871 - CePI673135_11g013650.1 Cec11g1365 216577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g1365 420 Pfam EamA-like transporter family 19 159 IPR000620 GO:0016020(InterPro)
Cec11g1365 420 Pfam EamA-like transporter family 190 329 IPR000620 GO:0016020(InterPro)
Cec11g1365 420 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 162 - -
Cec11g1365 420 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 334 - -
Cec11g1365 420 PANTHER WAT1-RELATED PROTEIN 20 360 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cec11g1365 420 MobiDBLite consensus disorder prediction 354 377 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g0704 Cec-Chr6:8005190 Cec11g1365 Cec-Chr11:27912721 1.10E-69 dispersed
Cec06g1656 Cec-Chr6:30162880 Cec11g1365 Cec-Chr11:27912721 1.70E-62 dispersed
Cec07g1061 Cec-Chr7:25714993 Cec11g1365 Cec-Chr11:27912721 1.10E-48 dispersed
Cec09g1994 Cec-Chr9:36963820 Cec11g1365 Cec-Chr11:27912721 9.90E-09 dispersed
Cec10g1459 Cec-Chr10:28930552 Cec11g1365 Cec-Chr11:27912721 2.40E-37 dispersed
Cec10g1461 Cec-Chr10:28946866 Cec11g1365 Cec-Chr11:27912721 1.20E-39 dispersed
Cec10g1660 Cec-Chr10:31079733 Cec11g1365 Cec-Chr11:27912721 3.70E-124 dispersed
Cec11g1365 Cec-Chr11:27912721 Cec11g1619 Cec-Chr11:30471817 1.80E-92 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g1365 - - - 0.0