Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g1410 ATGGCTACTTGCATTCGAGATTTGGTAGAAGAAGAGGAACACATTTTCCGCAGCCAACTTCCTGAGGTCCAAGTGCCTGATAATATCACACTGCCGGAGTTTGTACTTCAGAATGCTGAATCATATGCTGAAAATGTGGCATTTGTGGAAGCCGTGAGTGGAAAGGCTTACACTTACCGCGAAGTTGTGAGAGACATAAATAGATTTTCCAAGGCCTTGTGCTCTCTGAGGTTAAAGAAGGGGCAGGTAGTTATTGTTGTTCTACCCAATGTTGCAGAATATGCCATTGTTGCTTTAGGGATAATGGCTGCTGGAGGTGTGTTTTCTGGTGTGAATCCAGCCGCTCATATATCAGAAATCAAAAAGCAGGTGGAGGTAGCAGAAGCCAAACTTGTCGTCACGAACAGCGCAAACTTTGAAAAGGTGAAGGAATTAAACCTACCAGTGATCTTATTAGGGGAGGAACTAATTGAAGGTTCCATTAATTGGCACAAACTGCTTGAAGCTGCAGACCGTGCAGGCAACAATTTTGTTGAAGAAGATATTAAGCAGACTGATTTATGTGCCCTCCCTTTCTCATCAGGCACCACAGGGGTTTCCAAAGGCGTTATGCTAACTCACCGAAATCTAATAGCTAATTTGTGTTCGACTCTCTCCGGTGTCCCAAAAGAAATAGAGGGCAAGGTCACGACGTTAGGCCTCATTCCGTTCTTCCATATTTACGGGATCACTGGAATATGTTGTGCTGCACTTAGAAACAAGGGAAAAGTTGTGGTGATGGGAAGATTTGATCTCAGGACCTTCATTAATGCCCTCATAACACAGGAGGTCACATTTGCTCCAATTGTTCCTCCTATCATCCTGGCTTTGGTTAAGAATCCTATTGTCGAAGAATTTGATCTTAGCAGTCTCAAACTTCAGGCTATCATGACTGCAGCTGCTCCACTCGCACCCGAAGTTCAAACTGCCTTCGAAAGAAAGTTCCCAGGCGTGGATATTCAAGAGGCATATGGACTCACCGAGCATAGCTGCATCACTCTCAACTATGGAAGTATGGGCAAAGATAATCTCACTGCAAAGAAAAACACAGTTGGCCGCATTCTTCCTAATCTAGAAGTCAAATTCATCGATCCAGACAGCGGAAGGTCTCTGCCGAAGAACACTCCGGGTGAAATCTGTGTAAGAAGCCAGTGTGTGATGCAAGGTTACTACAAAAATGAAGAGGAGACTTCAAGGACGATCGATAACAAAGGCTGGATGCACACTGGGGACATTGGATACATCGATGACGATGGCGACGTGTTTATTGTGGATCGTATCAAGGAATTGATCAAGTACAAAGGCTTTCAAGTTGCTCCAGCTGAGTTAGAGGCAATCCTCCTTGCTCATCCCTCCATTGAAGATGCAGCTGTGGTGCCGCTGCCAGACGAAGAAGCCGGTGAGATCCCAGCAGCAAGTGTCGTGATGGCTCCGAATTCGAAAGAAACTGAAGATGAAATAATCAAACATGTTGCCTCAAATGTTGCACATTACAAGAAAGTTAGGCTCGTTCATTTTGTGGATACTATCCCGAAGTCGCCTTCTGGGAAAGTTATGAGAAGGTTGATCAAAGAGAAGATGCTCAAAAAGATTCGAGCTGAATCCGCCTCTTAG 1653 44.77 MATCIRDLVEEEEHIFRSQLPEVQVPDNITLPEFVLQNAESYAENVAFVEAVSGKAYTYREVVRDINRFSKALCSLRLKKGQVVIVVLPNVAEYAIVALGIMAAGGVFSGVNPAAHISEIKKQVEVAEAKLVVTNSANFEKVKELNLPVILLGEELIEGSINWHKLLEAADRAGNNFVEEDIKQTDLCALPFSSGTTGVSKGVMLTHRNLIANLCSTLSGVPKEIEGKVTTLGLIPFFHIYGITGICCAALRNKGKVVVMGRFDLRTFINALITQEVTFAPIVPPIILALVKNPIVEEFDLSSLKLQAIMTAAAPLAPEVQTAFERKFPGVDIQEAYGLTEHSCITLNYGSMGKDNLTAKKNTVGRILPNLEVKFIDPDSGRSLPKNTPGEICVRSQCVMQGYYKNEEETSRTIDNKGWMHTGDIGYIDDDGDVFIVDRIKELIKYKGFQVAPAELEAILLAHPSIEDAAVVPLPDEEAGEIPAASVVMAPNSKETEDEIIKHVASNVAHYKKVRLVHFVDTIPKSPSGKVMRRLIKEKMLKKIRAESAS 550
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 28310849 28313126 + CePI673135_11g014100.1 Cec11g1410 216622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g1410 550 Pfam AMP-binding enzyme C-terminal domain 455 530 IPR025110 -
Cec11g1410 550 Pfam AMP-binding enzyme 37 404 IPR000873 -
Cec11g1410 550 Gene3D - 442 545 IPR045851 -
Cec11g1410 550 FunFam 4-coumarate--CoA ligase 2 442 543 - -
Cec11g1410 550 FunFam Long-chain-fatty-acid--CoA ligase FadD 17 441 - -
Cec11g1410 550 CDD 4CL 25 534 - -
Cec11g1410 550 Gene3D - 13 441 IPR042099 -
Cec11g1410 550 SUPERFAMILY Acetyl-CoA synthetase-like 20 543 - -
Cec11g1410 550 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 11 536 - GO:0004467(PANTHER)|GO:0016405(PANTHER)|GO:0046949(PANTHER)
Cec11g1410 550 ProSitePatterns Putative AMP-binding domain signature. 190 201 IPR020845 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec10g1289 Cec-Chr10:27002219 Cec11g1410 Cec-Chr11:28310849 1.80E-116 dispersed
Cec10g2018 Cec-Chr10:34944164 Cec11g1410 Cec-Chr11:28310849 1.10E-103 dispersed
Cec11g1410 Cec-Chr11:28310849 Cec11g1627 Cec-Chr11:30532692 6.00E-19 dispersed
Cec11g1410 Cec-Chr11:28310849 Cec11g1308 Cec-Chr11:27128232 2.40E-108 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g1410 K01904 - csv:101220731 984.556