Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g1414 ATGGCCGCAACCAGGACTGTGATGCGTTCTGCATCCATTTTCTTATCGGAGCCATCGCGACCCCTTCACTTCACTCCTCCTTCTTCCTCCTTCTCTCTCGGAACCAGGCGATCCTTCACCCACAGATTGTATTGCAATGTCAGCAGAGTTAGCGCTCGAGGTTTTCACTTCCCTAAACGAACTGTTCTGAATTGCTCCCACGATGAAACCCAATCGACGTCGTCCTCTAATCAGGACGGCCAGGGCCCTCCTCAGGAGGCTGTTTTGAAGGCAATTTCAGAGGTATCTAAGACAGAAGGGAGGGTTGGGCATACCACGAATATGGTGATTGGAGGAACAGTGACTGGTGATTCTACCAACGAGTGGCTCGCTTTGGATCAGAAGGTGAATTCGTACCCGGGTGTTAGAGGCTTTACAGCAATTGGAACTGGAGGAGATGATTTTGTGCAATCTATGATTGTTGCTGTGGAGTCTGTCCTCCAACAACCAATTCCTGAGGGCAAGGTGAGGCATAAATTTTCAGCAAAAGGGAAGTACATTTCGGTGAACATAGGACCAGTTCAAGTAATTTCCAGTGAGCAGGTTCAAGCCGTATACAATGCAATGAAGAGAGATGACCGTATGAAATACTTTCTATAA 639 47.73 MAATRTVMRSASIFLSEPSRPLHFTPPSSSFSLGTRRSFTHRLYCNVSRVSARGFHFPKRTVLNCSHDETQSTSSSNQDGQGPPQEAVLKAISEVSKTEGRVGHTTNMVIGGTVTGDSTNEWLALDQKVNSYPGVRGFTAIGTGGDDFVQSMIVAVESVLQQPIPEGKVRHKFSAKGKYISVNIGPVQVISSEQVQAVYNAMKRDDRMKYFL 212
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 28339973 28346635 - CePI673135_11g014140.1 Cec11g1414 216626

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g1414 212 PANTHER PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE 1 212 - -
Cec11g1414 212 Pfam Protein of unknown function (DUF493) 129 212 IPR007454 -
Cec11g1414 212 Gene3D - 126 212 - -
Cec11g1414 212 SUPERFAMILY YbeD/HP0495-like 126 212 IPR027471 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g1414 - - - - 0.0
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g1253 . . Bda01g02177 . . . . . Cmo04g01936 . . Cma18g00692 . Car18g00641 Sed04g0293 Cpe09g00593 Cpe01g01619 Bhi07g01930 Tan04g0042 Cmetu10g0783 Lac13g0048 Hepe10g1511 . . . . . . . . . . . . . . . . Cme10g00667 . . . . . . Bma01g00007 . . . . Cma04g01839 . . . . . . . . . . . . Cla11g01333 Cam11g1392 Cec11g1414 Cco11g1410 Clacu11g1550 Cmu11g1371 Cre11g1789 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009665 1 1 0 1 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 0 1 1 1 1 33