Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec11g1417 | ATGGCTTCCGCTTGTGCTTCTTCCGCCATTGCGGCTGTGGCAATCTCTTCATCCAGTTCCCAGAAGAATGGGTGCCCCAAGGCTTCTAATTTCCTTACCGGCAAGAAGCTGAGGCTGAGAAACTTAACTGCCGCGGCTGCTGTTGCTCCTCGATCAGCTCCGGTATGCGCCGCAGCTGACCCCGACAGACCTCTCTGGTTCCCTGGCAGCACCCCTCCTCCATGGCTCGACGGCAGCCTTCCCGGCGACTTTGGCTTTGACCCACTTGGTCTTGCGTCTGATCCGGAGAGTCTGAGATGGAACCAGCAGGCGGAGCTGGTACACTGCCGATGGGCAATGTTGGGGGCGGCCGGAATTTTCATCCCGGAATTTTTGACAAAGATCGGAATATTGAACACTCCGTCGTGGTACACCGCCGGTGAATTGGAATACTTCACCGACACCACCACTCTGTTCATAGTGGAACTCATTTTCATTGGTTGGGCCGAGGGTAGACGGTGGGCCGACATCCTCAAACCCGGCTGCGTCAACACCGACCCGATTTTCCCTAACAACAAGCTCACCGGAACCGACGTCGGATACCCGGGTGGGCTTTGGTTCGACCCGCTCGGGTGGGGAAGCGGGTCACCCGAAAAGATCAAGGAATTGAGAACGAAAGAGATAAAGAACGGGCGATTGGCTATGTTGGCGGTGATGGGAGCTTGGTTCCAACACATTTACACCGGCACCGGTCCCATTGACAACCTCTTCGCTCACCTTGCCGATCCCGGCCACGCCACCGTCTTCGCCGCTTTCACACCAAAGTGA | 807 | 56.75 | MASACASSAIAAVAISSSSSQKNGCPKASNFLTGKKLRLRNLTAAAAVAPRSAPVCAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK | 268 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 28360103 | 28362412 | - | CePI673135_11g014170.1 | Cec11g1417 | 216629 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec11g1417 | 268 | FunFam | Chlorophyll a-b binding protein, chloroplastic | 73 | 258 | - | - | |
Cec11g1417 | 268 | Pfam | Chlorophyll A-B binding protein | 72 | 238 | IPR022796 | - | |
Cec11g1417 | 268 | SUPERFAMILY | Chlorophyll a-b binding protein | 59 | 266 | - | - | |
Cec11g1417 | 268 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 12 | 263 | IPR001344 | GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0016020(InterPro) | |
Cec11g1417 | 268 | Gene3D | Chlorophyll a/b binding protein domain | 73 | 258 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec01g1759 | Cec-Chr1:32146271 | Cec11g1417 | Cec-Chr11:28360103 | 3.30E-48 | dispersed | |
Cec03g1553 | Cec-Chr3:33686161 | Cec11g1417 | Cec-Chr11:28360103 | 8.50E-88 | dispersed | |
Cec08g1644 | Cec-Chr8:27790748 | Cec11g1417 | Cec-Chr11:28360103 | 4.10E-50 | dispersed | |
Cec09g2164 | Cec-Chr9:38567499 | Cec11g1417 | Cec-Chr11:28360103 | 6.30E-37 | dispersed | |
Cec10g2202 | Cec-Chr10:36452102 | Cec11g1417 | Cec-Chr11:28360103 | 8.20E-28 | dispersed | |
Cec11g1417 | Cec-Chr11:28360103 | Cec11g1955 | Cec-Chr11:33598804 | 2.50E-23 | dispersed | |
Cec11g1417 | Cec-Chr11:28360103 | Cec06g1811 | Cec-Chr6:31568582 | 1.60E-62 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec11g1417 | K08908 | - | csv:101214055 | 517.694 |