Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g1430 ATGGCGGACAATTCCCCCTTGAAAAACATCCTTCAGAGCACCGCTCTTCTCCAGTATATACTCGAAGCCAACGCCTATCCGAGAGAGCATGAACAGTTGAAGGAACTCAGGGAATCAACCATTAAGAAATTTGAAATCGCGAGTGTGATGAATGTACCGGTGGATGAAGGATTATTTCTATCAATGCTTTTGAAATTGATGAACGCAAAGAAAACGATAGAGATCGGTGTATTCACTGGCTATTCCCTCCTCACCACTGCGCTTGCACTGCCCTCCGATGGCCAGATAACAGCAATTGATGTTGATAGAGAATCATTCGAGTTTGGTTTGCCATTTATCAAAAAGGCTGGAGTTGATCATAAGATCAATTTTGTAGAATCTCAGGCATTGGTTGCCCTAAATGACCTCCTCAATGATGGTAAAGAAGAAGAGTTTGATTTTGCATTTGTTGATGCCAATAAATCAGAGTACATTATATATCATGAGTTCCTTCTAAAACTGGTGAAGGTAGGTGGAGTAATTGCCTATGATAACACTCTATGGTTGGGATCAGTAGCGCTAAGTGATGACGCCGTCCATGAAGATTTGAAGGAGAACAAAAGTTATTTGCAACGATTCAATACTTTTCTAGTCAGTGACACACGGGTGGAGATAGTTCTCCTCTCCATTGGAGATGGTGTCACTCTTTGCAGGCGTATCAAATAA 705 41.56 MADNSPLKNILQSTALLQYILEANAYPREHEQLKELRESTIKKFEIASVMNVPVDEGLFLSMLLKLMNAKKTIEIGVFTGYSLLTTALALPSDGQITAIDVDRESFEFGLPFIKKAGVDHKINFVESQALVALNDLLNDGKEEEFDFAFVDANKSEYIIYHEFLLKLVKVGGVIAYDNTLWLGSVALSDDAVHEDLKENKSYLQRFNTFLVSDTRVEIVLLSIGDGVTLCRRIK 234
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 28449989 28454229 - CePI673135_11g014300.1 Cec11g1430 216642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g1430 234 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 16 232 IPR029063 -
Cec11g1430 234 Pfam O-methyltransferase 25 233 IPR002935 GO:0008171(InterPro)
Cec11g1430 234 CDD AdoMet_MTases 73 176 - -
Cec11g1430 234 Gene3D Vaccinia Virus protein VP39 2 234 IPR029063 -
Cec11g1430 234 PANTHER O-METHYLTRANSFERASE-RELATED 8 233 IPR050362 GO:0008757(PANTHER)
Cec11g1430 234 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 9 233 IPR002935 GO:0008171(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0629 Cec-Chr2:6340212 Cec11g1430 Cec-Chr11:28449989 4.20E-65 dispersed
Cec04g1383 Cec-Chr4:33461799 Cec11g1430 Cec-Chr11:28449989 2.80E-10 dispersed
Cec05g1190 Cec-Chr5:10908247 Cec11g1430 Cec-Chr11:28449989 2.00E-16 dispersed
Cec11g1425 Cec-Chr11:28428057 Cec11g1430 Cec-Chr11:28449989 4.40E-112 dispersed
Cec11g1426 Cec-Chr11:28438198 Cec11g1430 Cec-Chr11:28449989 1.70E-39 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g1430 K00588 - csv:101212121 369.007