Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g1436 ATGGACAAAAATCTGTTGTTTCTAGTCTTGACTTTTCACTTTCAGGTTGCGTTTACGGTTTTAGCCCTCTCGCCGGATGGTCTCTCGCTTCTCTCTCTGAAGTCGGCGATTGACCAGTCGCCGGATTCCTCTGTTTTCTCCGATTGGAACGAGGATGACTCCACGCCTTGCCGATGGTCTGGCATTTCTTGCATGAACGTTTCCGGTGACTCGCGAGTCGTTGGAATTGCTCTCTCTGGTAAGAATCTCCATGGCTACATTCCTTCTGAACTCGGCTCGCTTGTCTATCTCCGGCGATTGAACCTCCATAACAATAATCTCTACGGCTCGATACCTGAACAGTTGTTTAATGCTACCTCATTACATAGCCTATTTCTCTACAGTAATAATCTCTCCGGTCCTTTTCCCCCTTCGATCTGCAACATTCCGAGGCTTCAAAACCTCGATCTCTCTAACAATTCTCTCGCCGGACCACTACCCGACGAATTGAAGAATTGTAAGCAATTGCAGCGATTAATACTCGCTAGAAATCAATTCGACGGAGAAATACCGTCTGGTGTTTGGTCTGGGATGGATAATTTACTTCAACTTGATCTCTCATCCAACGATTTCAGCGGATCGATTCCGGAGGATCTAGGGCAACTGAAGACACTTTCCGGTACGCTCAACCTCTCCTTCAATCATTTATCAGGTAAAATCCCGAAAACTCTCGGAGATTTGCCGGTAACGGTGAGTTTCGACCTCCGGAGCAACAATTTAAGCGGAAGCATACCTCAGACAGGTTCTTTCGCGAATCAAGGACCGACTGCATTTCTCAACAATCCCGAGTTATGTGGATTTCCTCTTCAAAAATCTTGTGAGAGTTCAGAACGTGGCTCACCGGGAAATCCGGATTCCAAGCCATCTTACATTTCCCCTAGAAAAGGATTGAGCGCCGGATTAATCATTCTCATCTCTGCCGCTGACGCCGCCGGAGTAGCATTTATCGGCTTGGTAATAGTATACATATATTGGCGACGGAAGGACAATTCGAACGGCTGTAGCTGTACGGCTAAAAGAAAATTCGGTGGGAATCAGAAAGACAATCTCTGCAATTTTCCTTGTATGAATGGACATGATAAGAATGAGGAGTCGGAAATGGAGGAACCGGAGAACAGTGAGAGAAGCAGAGAGGAAGGAGGGCTGGTGGCCGTAGACAAAGGCTTTACCTTCGAACTCGACGAGTTGCTGAGAGCGTCGGCGTATGTGCTGGGAAAGAGTGGACTGGGAATTGTGTACAAAGTGGTCCTCGGAAATGGGATTCCGGTGGCTGTACGGCGGTTGGGGGAAGGCGGAGAACAGAGGTATAAGGAGTTTGCGGCGGAGGTGCAGGCGATTGGAAGGGTAAAGCATCCTAATATTGTGAAACTGAGAGCTTATTATTGGGCGCCGGATGAGAAGCTTCTGATCAGTGATTTTATCTCCAATGGGAACTTGGCCTCTGCTCTTCGCGGGAAGAACGGGCAGGCATCTTCAATCCTTTCATGGGCAACAAGATTACGAGTAGCCAAGGGAACCGCCAGAGGATTAGCCTATCTACACGAATGCAGCCCAAGAAAATTCGTCCATGGCGACATCAAGCCCTCCAACATTCTCCTCGACAACGATTTCCATCCCCACATCTCCGACTTCGGCCTCAACCGCTTGATCAGCATCACCGGCAACAACCCCTCCTCCTCAGGCGGCCTCATCGGCGGCGCCTTCTCCTACCTCAAGTCCGTCCAAACCGACCGCACCAACAACTACTGCGCCCCGGAGGCCCGAGCCCCCGGCGGCCGCCCCACCCAAAAATGGGACGTTTATTCCTTCGGCGTCATGGTCCTCGAATTACTCACCGGAAAGTCGCCGGAGCTTTCCCCGAACACGTCGACTTCTTTGGAGATTCCGGATTTGGTGAGATGGGTTAGAAAAGGGTTTGAAGAAGCAAAACCATTGTCGGAATTGGTGGACCCTGCTCTGTTACAAGAAGTACATGCTAAGAAAGAAGTGCTGGCCGTATTCCACTTGGCGCTCTCTTGTACAGAGAGCGACCCGGAAGTTCGGCCCAGAATGAAGACGGTGTCGGAGAATTTCGAGAGGATTGGATCGTGA 2130 49.91 MDKNLLFLVLTFHFQVAFTVLALSPDGLSLLSLKSAIDQSPDSSVFSDWNEDDSTPCRWSGISCMNVSGDSRVVGIALSGKNLHGYIPSELGSLVYLRRLNLHNNNLYGSIPEQLFNATSLHSLFLYSNNLSGPFPPSICNIPRLQNLDLSNNSLAGPLPDELKNCKQLQRLILARNQFDGEIPSGVWSGMDNLLQLDLSSNDFSGSIPEDLGQLKTLSGTLNLSFNHLSGKIPKTLGDLPVTVSFDLRSNNLSGSIPQTGSFANQGPTAFLNNPELCGFPLQKSCESSERGSPGNPDSKPSYISPRKGLSAGLIILISAADAAGVAFIGLVIVYIYWRRKDNSNGCSCTAKRKFGGNQKDNLCNFPCMNGHDKNEESEMEEPENSERSREEGGLVAVDKGFTFELDELLRASAYVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRYKEFAAEVQAIGRVKHPNIVKLRAYYWAPDEKLLISDFISNGNLASALRGKNGQASSILSWATRLRVAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFHPHISDFGLNRLISITGNNPSSSGGLIGGAFSYLKSVQTDRTNNYCAPEARAPGGRPTQKWDVYSFGVMVLELLTGKSPELSPNTSTSLEIPDLVRWVRKGFEEAKPLSELVDPALLQEVHAKKEVLAVFHLALSCTESDPEVRPRMKTVSENFERIGS 709
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 28520153 28525118 - CePI673135_11g014360.1 Cec11g1436 216648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g1436 709 SMART serkin_6 415 707 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g1436 709 MobiDBLite consensus disorder prediction 285 304 - -
Cec11g1436 709 FunFam Leucine-rich repeat receptor-like protein kinase 193 288 - -
Cec11g1436 709 SUPERFAMILY L domain-like 28 283 - -
Cec11g1436 709 CDD STKc_IRAK 417 707 - -
Cec11g1436 709 ProSiteProfiles Protein kinase domain profile. 411 707 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g1436 709 Pfam Protein kinase domain 416 699 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g1436 709 Pfam Leucine Rich Repeat 193 215 IPR001611 GO:0005515(InterPro)
Cec11g1436 709 Pfam Leucine Rich Repeat 221 240 IPR001611 GO:0005515(InterPro)
Cec11g1436 709 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 167 707 IPR046959 -
Cec11g1436 709 Gene3D Phosphorylase Kinase; domain 1 403 486 - -
Cec11g1436 709 MobiDBLite consensus disorder prediction 286 300 - -
Cec11g1436 709 Pfam Leucine rich repeat 97 155 IPR001611 GO:0005515(InterPro)
Cec11g1436 709 Pfam Leucine rich repeat N-terminal domain 24 64 IPR013210 -
Cec11g1436 709 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 23 189 - -
Cec11g1436 709 Gene3D Ribonuclease Inhibitor 187 288 IPR032675 -
Cec11g1436 709 SUPERFAMILY Protein kinase-like (PK-like) 416 702 IPR011009 -
Cec11g1436 709 ProSitePatterns Serine/Threonine protein kinases active-site signature. 534 546 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec11g1436 709 Gene3D Ribonuclease Inhibitor 25 186 IPR032675 -
Cec11g1436 709 FunFam Leucine-rich repeat receptor-like protein kinase 394 486 - -
Cec11g1436 709 Gene3D Transferase(Phosphotransferase) domain 1 487 709 - -
Cec11g1436 709 FunFam Os07g0541700 protein 492 574 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g0128 Cec-Chr4:5096488 Cec11g1436 Cec-Chr11:28520153 5.00E-94 dispersed
Cec11g0278 Cec-Chr11:3025179 Cec11g1436 Cec-Chr11:28520153 8.50E-49 dispersed
Cec11g0759 Cec-Chr11:8732896 Cec11g1436 Cec-Chr11:28520153 1.60E-89 dispersed
Cec11g1436 Cec-Chr11:28520153 Cec01g1526 Cec-Chr1:29863629 1.90E-46 dispersed
Cec11g1436 Cec-Chr11:28520153 Cec05g2466 Cec-Chr5:35796823 1.10E-110 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72417 PF00069 Pkinase 3.90E-33 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g1436 - - - 0.0