Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g1444 ATGTGGTACGTGTATTTGTATACTCGGAATCACAACTTTCCTTATTCTCTTCATCCGACTCCGTGGTCGTTTCGTCTTCGATTGACTAGGGTTCTCTCTACGCGTCTATCTAGGACTCCGCTCGCTTGCGCGACTTCTCTTCGATTCATACCGCTTTTCATCCAATCCTACTTCACAGATTACAGGGTTTTCTTTGGGAGCTATTGGTTGAGGTTTGGTATTTTGATGGCAGCGGGGAGAATGGGGGGTTATCGCGACTATGATATGAAGGACCGGGATTCCAATTTTGATGTTTCGGGAGTAACTGCGAAAGAAGGATATGAACGGGGGCGGAGCGGTAACCGTGAAAGCAATAAAAGTCGAGGTCGGGATGTTAGAGACAGAATTAGGGTCCGGCAAAAGGATATCAAGGAGAGGGAAGCGGGTAATGGTAGTCTACGATCTTCAAGTAGAAGTGATTCTGGAAGCAGTGGTGGTATTGCTTCTCACGGGTTGAAGCAAAAGGTTTTGCTTGTCAGGACAATGGATAGGGAGCCGGGCGAGCTATCCAGTGAGAGTGGATCTGATGATGCCACTGAGTCCGGATTACGATTTAAAAATAGTGAGTCGGCAAAGGTGGTGGAGAATGGTATTCATTCTCCACTAGAGAAGAAGAGGAAGTTCTCACCAATAGTTTGGGACAGAGACGATAAGGAAGATGCCATTTCCACAAGAAATAAGGTTGCCAAGGCTGCGACTGCTTCATCTGTGCCGTCACCAAAGGAGCAGAAGCAGTCTCCTAATGCAACGTCGGACACTCTTGATGCTATGCCAACGGCAGGTGGTAGAAGTAAGGATCTGGAGTACTTGCAACCTTCCTCTCTTGTTGAACCTTCTGCTGGGGGCCTTGGATCAGATGAATTCTCCGCAAGTGGTTCACCAATGATGCCATCTTCTGCTTTGCTTAGGAAACCATGGCAGAATGATCTTGAAGCAGAAAATTTTGGGGATGATGATTATGCTCCCACAAGAAACATTTCATCCTCTAGATGGGCTGCTGGAAATAACACTCCTGGTGATGAAGGTGAAATTTTAGACGAGGAAATGCCTAAAAGACGAAAGACAACACCAATTTCTGAGTCCTTGGAGGGCATCAAAGCACAAAGAAAATCATTAACTCCAGAGATTGGGGAGATAATGAGACAAGGCTCTGAAGCAGGGACAAGGTCATCTGAATCGACGGAACGTGGTGATCGGTCTCGATCATCTAGTGCAAATCATTACCTTGGTAATGATTTTGAGAAGGACGAAGGCATGGATCTTGGTGATGATATTCGTAGAATGGATACTAGCAGTAGCAGGTTGGATACTGATTCTGAGGATGAGACAGAATCTCCCGAGGAAGCAGAGCCTAGTGGGCCTCCTCCTCAACGAAGTGTAAATATGCTTCAGGGCTGTAGAAGTGTTGATGAATTTGAGAGGTTGAATAAGATCGATGAAGGAACTTATGGTGTTGTGTATAGAGCCAGAGACAAGAAGTCAGGGGAAATTGTTGCGTTGAAGAAGGTAAAAATGGAAAAGGAACGAGAAGGTTTTCCCATGACTTCTTTGAGAGAAATAAACATTCTTCTATCTTTTCATCACCCTTCAATTGTTGATGTAAAAGAAGTGGTGGTGGGCAGTAGTCTCGATAGCATTTTTATGGTAATGGAGTACATGGAGCATGATCTAAAAGCACTCATGGAGACAATGAAGCAGCCATTTAGTCAAAGTGAAGTCAAATGTCTGATGCTTCAGTTACTGGAGGGTGTTAAATACCTTCACGATAATTGGGTGCTCCATAGGGATTTAAAAACATCAAATTTACTTATGAATAACCAGGGAGAGTTGAAGATCTGTGATTTTGGACTAGCTCGGCAATATGGGAGCCCCTTGAAAACGTATACACATATGGTTGTTACTCTTTGGTACAGGGCACCTGAACTTTTATTGGGAACAAGACAGTATTCTACAGCAATTGACATGTGGTCCTTGGGTTGTATTATGGCTGAATTATTGTCAAAGCAACCACTGTTTAATGGAAAAACTGAAGTTGATCAACTTGACAAGATATTCCGAACTCTAGGGACACCCAATGAAACAATTTGGCCTGGGTTTTCCAAGCTTCCAGGAGTAAGGGTGAACTTTGTTAAGCACCAGTACAACTTATTGCGTAAGAAATTCCCAGCGACATCATTTACCGGTTCGCCAGTTCTTTCTGATTCAGGATTTGATTTGTTGAACAAACTTCTAACTTACGATCCTGAGAAGAGAATAACAGCTGAGGCTGCTCTTAATCATGAATGGTTCTCAGAAGTTCCTCTTCCGAAGTCTAAAGAATTCATGCCTACTTTTCCTGCTCAGCATGCTCAGGACAGGCGTTTACGGAGAGTAATGAAGAGTCCAGACCCCTTAGAAGAGCAACGCAGAAAGGAGTTGCAGCAAGGGGAATTGGGAACATCTGGCTTCTTGACGTCAATTCTTCTCCTCTGGTCATCGTATAGAAAATGCTTCACTGACACGGCTTGCATGGCAAGTATCAAAGCTAGCAGGTTGAGGAGCCTACCTGCATTGCTCTGGAAGTTATTAACTTAG 2613 44.13 MWYVYLYTRNHNFPYSLHPTPWSFRLRLTRVLSTRLSRTPLACATSLRFIPLFIQSYFTDYRVFFGSYWLRFGILMAAGRMGGYRDYDMKDRDSNFDVSGVTAKEGYERGRSGNRESNKSRGRDVRDRIRVRQKDIKEREAGNGSLRSSSRSDSGSSGGIASHGLKQKVLLVRTMDREPGELSSESGSDDATESGLRFKNSESAKVVENGIHSPLEKKRKFSPIVWDRDDKEDAISTRNKVAKAATASSVPSPKEQKQSPNATSDTLDAMPTAGGRSKDLEYLQPSSLVEPSAGGLGSDEFSASGSPMMPSSALLRKPWQNDLEAENFGDDDYAPTRNISSSRWAAGNNTPGDEGEILDEEMPKRRKTTPISESLEGIKAQRKSLTPEIGEIMRQGSEAGTRSSESTERGDRSRSSSANHYLGNDFEKDEGMDLGDDIRRMDTSSSRLDTDSEDETESPEEAEPSGPPPQRSVNMLQGCRSVDEFERLNKIDEGTYGVVYRARDKKSGEIVALKKVKMEKEREGFPMTSLREINILLSFHHPSIVDVKEVVVGSSLDSIFMVMEYMEHDLKALMETMKQPFSQSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLMNNQGELKICDFGLARQYGSPLKTYTHMVVTLWYRAPELLLGTRQYSTAIDMWSLGCIMAELLSKQPLFNGKTEVDQLDKIFRTLGTPNETIWPGFSKLPGVRVNFVKHQYNLLRKKFPATSFTGSPVLSDSGFDLLNKLLTYDPEKRITAEAALNHEWFSEVPLPKSKEFMPTFPAQHAQDRRLRRVMKSPDPLEEQRRKELQQGELGTSGFLTSILLLWSSYRKCFTDTACMASIKASRLRSLPALLWKLLT 870
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 28606514 28611483 - CePI673135_11g014440.1 Cec11g1444 216656

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g1444 870 FunFam Cyclin-dependent kinase G-2 568 807 - -
Cec11g1444 870 SUPERFAMILY Protein kinase-like (PK-like) 477 782 IPR011009 -
Cec11g1444 870 Gene3D Phosphorylase Kinase; domain 1 470 567 - -
Cec11g1444 870 MobiDBLite consensus disorder prediction 145 161 - -
Cec11g1444 870 MobiDBLite consensus disorder prediction 170 184 - -
Cec11g1444 870 MobiDBLite consensus disorder prediction 211 238 - -
Cec11g1444 870 MobiDBLite consensus disorder prediction 423 452 - -
Cec11g1444 870 Gene3D Transferase(Phosphotransferase) domain 1 568 807 - -
Cec11g1444 870 Pfam Protein kinase domain 485 776 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g1444 870 MobiDBLite consensus disorder prediction 241 270 - -
Cec11g1444 870 ProSiteProfiles Protein kinase domain profile. 485 776 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g1444 870 PANTHER CELL DIVISION PROTEIN KINASE 484 776 IPR050108 GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0007346(PANTHER)
Cec11g1444 870 MobiDBLite consensus disorder prediction 334 348 - -
Cec11g1444 870 MobiDBLite consensus disorder prediction 108 144 - -
Cec11g1444 870 SMART serkin_6 485 776 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g1444 870 MobiDBLite consensus disorder prediction 101 474 - -
Cec11g1444 870 CDD STKc_CDC2L1 479 776 IPR045267 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec11g1444 870 ProSitePatterns Serine/Threonine protein kinases active-site signature. 605 617 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec11g1444 870 MobiDBLite consensus disorder prediction 185 199 - -
Cec11g1444 870 FunFam cyclin-dependent kinase G-2 isoform X1 470 567 - -
Cec11g1444 870 MobiDBLite consensus disorder prediction 357 372 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g1444 K08818 - - csv:101209096 1330.47
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g1651 Cec-Chr6:30105212 Cec11g1444 Cec-Chr11:28606514 3.00E-69 dispersed
Cec11g0246 Cec-Chr11:2629699 Cec11g1444 Cec-Chr11:28606514 3.40E-34 dispersed
Cec11g0476 Cec-Chr11:5119750 Cec11g1444 Cec-Chr11:28606514 6.50E-62 dispersed
Cec11g1444 Cec-Chr11:28606514 Cec11g1943 Cec-Chr11:33537186 5.30E-70 dispersed
Cec11g1444 Cec-Chr11:28606514 Cec08g1784 Cec-Chr8:28927488 1.40E-240 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g1152 . . Bda01g02188 . . . . . . Cmo18g00702 . Cma18g00715 . Car18g00660 . Cpe09g00576 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bma01g00022 . . . . . . . . . . . . . . . . . Cla11g01359 Cam11g1415 Cec11g1444 Cco11g1440 Clacu11g1574 Cmu11g1394 Cre11g1815 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000852 1 16 2 1 1 1 3 2 2 2 2 2 3 2 2 3 2 2 3 2 2 2 2 2 1 2 2 3 2 2 74
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72418 PF00069 Pkinase 1.70E-75 CL0016 Cec PK