Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g1465 ATGGATAAGCTCTGCTGTTTTAATGCTTCATACTCTGGGATTAGGTCCGCATTGAATTACGGTAAAGGAAGAAGCCATGAGGGCATAATCAAGTATGGGTTCTGCCTGGTCAAAGGGAAAGCTAATCATCCCATGGAAGATTACCATGTTGCTAAGTTTGTTCAGATTCAAGAACATGAATTGGGGCTCTTTGCTATTTATGATGGCCATTTAGGAGAAAGTGTGCCTGCCTACTTACAAAAGCATTTGTTTTCTAACATCTTGAAAGAGGAAGAGTTTTGGGTTGACCCCAACAGCTCCATCTCAAAAGCATATGAAAAGACGGACCAGGCGATTCTATCCCACAGCTCTGACTTGGGTCGTGGTGGATCAACTGCTGTTACTGCTATTCTGATTAATGGTCGAAGACTATGGGTGGCCAATGTCGGTGATTCACGTGCAGTTCTTTCTAGAGGGGGCGAAGCTGTACAGATGACCATCGATCATGAGCCAAATACAGAACGTCGCACAATTGAGAATAAAGGTGGCTTTGTTTCAAACATGCCAGGAGACGTGCCACGAGTAAACGGCCAGCTAGCAGTTTCACGAGCATTTGGAGACAAGAGTCTCAAATCTCACCTGCGATCAGATCCTGACATACGTGATGTTAATGTAGACGCCAACACGGACATATTAATTCTCGCCAGCGACGGTCTTTGGAAGGTCATGGCCAATCAAGAAGCGGTCGATATTGCACGAAGAATTAAAGACCCATTGAAGGCTGCTAAGCAGTTAATAACTGAGGCTTTGGAGAAAGAGAGTAAAGATGATATATCATGCATTGTGGTGTTGTGTGCTATCGCATCTCTGGTTTCCCCTACTTGGATGCCATATGCCTCTTCACCCCACATTTCAATGTGTATGTGCCAGATCTCATCTACTTTGGGGACTCGATCACAACCCAGCCAGAGTGGTCCGACTCGTTCCAAAGCCGAGTTTATCATGTGTGTAATGGCTGCCAACTCAGTGAGGAAGCTAAGCCTCATTGGATTGAGCTATGGTGGGTTTGTTGGATATTGCTTGGTGGCGAGATATCACAAGGTGGTGGAGAGGGTGGTGATATGTAGTGCAGGTGTTTGTATGGAAAAGAAAGACCTGAAAGAAGGTTTGTTCAGAATCCCAGACTTGGAGGAGGCAGACAAGATTTTGGTGCCGCAAGATCCTAAGAAATTGAAAGAATTGGTGAAGTTTGGCCTCTTCAGGCCTCCTCCACTAGCATTGCTGCCCTCTTGTAGAAACTATCAGACATCCCCAAGATCCATCAGCTGGTTTCATCTTCTCACATACATTCATTTCATTTCATTTCTTCAAGTTTTTTCTTTTCTACTAAATCATGTGCAAAACAACCCTGATTTGAAGCAGCCAACTTTGATAATTTGGGAGAAGGTGACAAGGCATTTTGGGGAAAGCGCTCAACCGGTAGTAATCAAGAACGCAGGGCATGCTTGTGATTTGGAAAAGCCCAAGGAGTACTATCATCACTTGAAGTCCTTCCTCGGCATCCAGCGGCGAAACCACAAATGA 1563 44.91 MDKLCCFNASYSGIRSALNYGKGRSHEGIIKYGFCLVKGKANHPMEDYHVAKFVQIQEHELGLFAIYDGHLGESVPAYLQKHLFSNILKEEEFWVDPNSSISKAYEKTDQAILSHSSDLGRGGSTAVTAILINGRRLWVANVGDSRAVLSRGGEAVQMTIDHEPNTERRTIENKGGFVSNMPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDIRDVNVDANTDILILASDGLWKVMANQEAVDIARRIKDPLKAAKQLITEALEKESKDDISCIVVLCAIASLVSPTWMPYASSPHISMCMCQISSTLGTRSQPSQSGPTRSKAEFIMCVMAANSVRKLSLIGLSYGGFVGYCLVARYHKVVERVVICSAGVCMEKKDLKEGLFRIPDLEEADKILVPQDPKKLKELVKFGLFRPPPLALLPSCRNYQTSPRSISWFHLLTYIHFISFLQVFSFLLNHVQNNPDLKQPTLIIWEKVTRHFGESAQPVVIKNAGHACDLEKPKEYYHHLKSFLGIQRRNHK 520
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 28853053 28860993 + CePI673135_11g014650.1 Cec11g1465 216677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g1465 520 Gene3D - 26 281 IPR036457 -
Cec11g1465 520 PANTHER PROTEIN PHOSPHATASE 30 276 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cec11g1465 520 SUPERFAMILY alpha/beta-Hydrolases 324 512 IPR029058 -
Cec11g1465 520 ProSiteProfiles PPM-type phosphatase domain profile. 31 278 IPR001932 -
Cec11g1465 520 SMART PP2C_SIG_2 42 278 IPR001932 -
Cec11g1465 520 SUPERFAMILY PP2C-like 25 277 IPR036457 -
Cec11g1465 520 CDD PP2Cc 30 278 IPR001932 -
Cec11g1465 520 SMART PP2C_4 23 276 IPR001932 -
Cec11g1465 520 Pfam Protein phosphatase 2C 40 271 IPR001932 -
Cec11g1465 520 Gene3D alpha/beta hydrolase 309 514 IPR029058 -
Cec11g1465 520 FunFam Probable protein phosphatase 2C 39 21 279 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec07g0291 Cec-Chr7:2857153 Cec11g1465 Cec-Chr11:28853053 1.60E-87 dispersed
Cec11g0835 Cec-Chr11:10298569 Cec11g1465 Cec-Chr11:28853053 1.10E-29 dispersed
Cec11g1465 Cec-Chr11:28853053 Cec11g1838 Cec-Chr11:32569232 1.10E-86 dispersed
Cec05g1772 Cec-Chr5:29554023 Cec11g1465 Cec-Chr11:28853053 2.10E-52 transposed
Cec07g0079 Cec-Chr7:789800 Cec11g1465 Cec-Chr11:28853053 8.20E-12 transposed
Cec10g0939 Cec-Chr10:20774523 Cec11g1465 Cec-Chr11:28853053 3.20E-120 transposed
Cec11g1465 Cec-Chr11:28853053 Cec04g1568 Cec-Chr4:35129063 5.40E-30 wgd
Cec11g1465 Cec-Chr11:28853053 Cec08g1136 Cec-Chr8:23284997 5.80E-40 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g1465 K17506 - csv:101213414 546.969