Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g1500 ATGGCGTCCGCCATCCCTGAAAACCTAACAAGGGAGCAGTATGTTTACCTTTCGAAGCTTTCCGAGCAAGCCGAGCGCTACGAGGAAATGGTTCAGTTCATGCAGAAGCTTGTACTGAGCTCCACTCCAGCCTCGGAGCTCACTGTCGAGGAGCGCAATCTCCTTTCCGTCGCATACAAAAATGTGATCGGTTCTCTCCGCGCGGCTTGGCGTATCGTATCCTCAATTGAACAGAAGGAAGAAGGAAGGAAGAACGAAGATCACGTTGTCCTTGTCAAGGATTACAGATCCAAGGTCGAGTCCGAGCTCACCGACGTCTGCGCCAGTATTTTGAAGCTGTTGGACTCCAATCTGATACCATCCTCATCCTCTGGTGAATCGAAGGTGTTCTACTTAAAGATGAAGGGAGATTACCATAGGTACCTGGCGGAGTTTAAGATCGGGGAGGAGAGAAAGTCCGCCGCCGAGGATACCATGCTAGCTTACAAGGCTGCTCAGGATATTGCAGCTGCCGATCTTGCACCAACGCATCCAATCAGGCTGGGCCTAGCACTAAATTTCTCTGTTTTTTACTTTGAGATCCTGAACCAGCCTGACAAAGCCTGTAGCATGGCCAAACAGGCATTTGAAGAAGCCATTGCGGAATTGGACACATTAGGTGAAGAATCATACAAGGATAGCACTCTAATCATGCAGCTCTTAAGAGACAATCTCACCCTTTGGACTTCTGATACACAGGACCAGTTAGACGAGCCATAG 759 49.14 MASAIPENLTREQYVYLSKLSEQAERYEEMVQFMQKLVLSSTPASELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEDHVVLVKDYRSKVESELTDVCASILKLLDSNLIPSSSSGESKVFYLKMKGDYHRYLAEFKIGEERKSAAEDTMLAYKAAQDIAAADLAPTHPIRLGLALNFSVFYFEILNQPDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDTQDQLDEP 252
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 29209278 29213045 - CePI673135_11g015000.1 Cec11g1500 216712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g1500 252 PRINTS 14-3-3 protein zeta signature 188 214 IPR000308 -
Cec11g1500 252 PRINTS 14-3-3 protein zeta signature 95 119 IPR000308 -
Cec11g1500 252 PRINTS 14-3-3 protein zeta signature 126 148 IPR000308 -
Cec11g1500 252 PRINTS 14-3-3 protein zeta signature 161 187 IPR000308 -
Cec11g1500 252 PRINTS 14-3-3 protein zeta signature 46 75 IPR000308 -
Cec11g1500 252 PRINTS 14-3-3 protein zeta signature 215 244 IPR000308 -
Cec11g1500 252 SMART 1433_4 11 251 IPR023410 -
Cec11g1500 252 PANTHER 14-3-3 PROTEIN 11 247 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Cec11g1500 252 Gene3D - 2 251 IPR036815 -
Cec11g1500 252 Pfam 14-3-3 protein 18 242 IPR023410 -
Cec11g1500 252 FunFam 14-3-3 protein epsilon 8 252 - -
Cec11g1500 252 SUPERFAMILY 14-3-3 protein 10 244 IPR036815 -
Cec11g1500 252 ProSitePatterns 14-3-3 proteins signature 1. 52 62 IPR023409 -
Cec11g1500 252 Coils Coil 17 37 - -
Cec11g1500 252 PIRSF 14-3-3 6 251 IPR000308 -
Cec11g1500 252 ProSitePatterns 14-3-3 proteins signature 2. 224 243 IPR023409 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec08g1150 Cec-Chr8:23406902 Cec11g1500 Cec-Chr11:29209278 2.00E-102 dispersed
Cec11g1476 Cec-Chr11:28968405 Cec11g1500 Cec-Chr11:29209278 2.00E-102 dispersed
Cec11g1500 Cec-Chr11:29209278 Cec08g1217 Cec-Chr8:24101169 1.70E-125 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g1500 K06630 - csv:101206352 462.996