Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec11g1504 AGGAGCCCACATTTTTCTTCATCATTCATCACAAAAATCAATGGTCTATCTGGATTCTATATATATGGACAAGCTCTCTTCCATTTGCACACACGAAGTTCAAAGCCAATGGCTTGTGGTAATGTCTACGACTCCGGCCGGTTTTCTATCCGTCATTCTTTATCTAAAGCATCTAGATTCTTTGACTTGATTGAGAAGCATCTTCAAAACACTTCAACTCTACCAAAATCCATCACTGGAGCTCTTACAGATTGTCAGTATCTTGCTCAACTGAATATCAATTTCTTGTCGAATTCGTTTCGGGCCGTTAATGGCACCGATAAAAAGCTAACTTACTCAAAAGCTGATTATATCCAAAGTCTTCTTAGTGCCATTTTAACCAACATTGATACCTGTCTTGATGGTCTAAACACTGTAGCCTCAGGTTCAAGTTTGGAGAAAAATTTGTTAGCCCCACTTATTGATTGTACCAAATCATACAGTCTTTCACTTGATCTTTTTACAAAGGGTTGGGTTCCTAGGAGGAATAGAAACAGAACACTTGGGAAAAAACACCAGCAGTTTAGGAAAGGACCAGTACCGTTGAGAATAATGTTGAGACGCGACCGGGAAGTTTACGACTTGGTGGTGAATCGGAGAAAGCTTTCTTCATCAGATGACGGAGTTTTGGTTAGTGGCATTGTAGTTGTGAGTCAAGATGGCAAAGGAGACTTCCTTAACATTACAGAAGCTATTAATGCAGCTCCAAATAACGCTCTTGCTGCCAATGGCTACTTCTTGATTTACATTATGGCTGGTGTTTACCAAGAGTATGTGTCTATCCCTTCAAAGAAGAAGTACTTGCTGATGATTGGAGATGGTATAAATCAGACTATCATCACAGGCAACCGGAGCGTCGCGGACGGATGGACGACGTTCAACAGTGCAACTTTTGCTGTAGCAGCAGAAGGATTCATGGCAGTAAACATAACCTTCCAAAACACAGCTGGACCCATCAAGGGCCAAGCAGTTGCATTAAGAAGTGGAGCTGATATGTGTGTTTTTTACAGCTGCAGTTTTGAAGGCTACCAAGACACCTTATACACTCATTCCCTCAGACAATTCTTTAGAGAATGTGATATTTATGGCACAGTAGACTTCATATTTGGAAATGCTGCCGTTGTCTTACAAAACTGTAACATATATCCCCGTCTTCCCCGCCCCGGTCAGACCAACATGATCACAGCTCAAGGCCGATCGGATCCGAACCAAAACACCGGGACTTCGATCCACAACTGCACGATCCGCTCCACAAGCGATTTGGCTGCAAGTAGTAGCTATAGGAACAAGACATATTTGGGAAGGCCATGGAAGCAATATTCAAGAACAGTGTATATGCAAACATTTATAGATGAGTTTATAAATCCTGGTGGTTGGGATCCATGGTCAGGGGAATATTTGAGCACATTGTATTATGGAGAGTATAATAATAGAGGAGGTGGATCAAATACAAAGAACAGAGTTAATTGGTCAGGTTTTCATGTGATTAATAATGCAACAGATGCTGCTTATTTTACAGTTTCAATTTTCTTGGTTGGGGATGTGTGGTTGCCTCCAACATGTGTGCCTTACACTGGAGGCTTGATATAA 1629 41.44 RSPHFSSSFITKINGLSGFYIYGQALFHLHTRSSKPMACGNVYDSGRFSIRHSLSKASRFFDLIEKHLQNTSTLPKSITGALTDCQYLAQLNINFLSNSFRAVNGTDKKLTYSKADYIQSLLSAILTNIDTCLDGLNTVASGSSLEKNLLAPLIDCTKSYSLSLDLFTKGWVPRRNRNRTLGKKHQQFRKGPVPLRIMLRRDREVYDLVVNRRKLSSSDDGVLVSGIVVVSQDGKGDFLNITEAINAAPNNALAANGYFLIYIMAGVYQEYVSIPSKKKYLLMIGDGINQTIITGNRSVADGWTTFNSATFAVAAEGFMAVNITFQNTAGPIKGQAVALRSGADMCVFYSCSFEGYQDTLYTHSLRQFFRECDIYGTVDFIFGNAAVVLQNCNIYPRLPRPGQTNMITAQGRSDPNQNTGTSIHNCTIRSTSDLAASSSYRNKTYLGRPWKQYSRTVYMQTFIDEFINPGGWDPWSGEYLSTLYYGEYNNRGGGSNTKNRVNWSGFHVINNATDAAYFTVSIFLVGDVWLPPTCVPYTGGLI 542
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 29244139 29246907 - CePI673135_11g015040.1 Cec11g1504 216716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec11g1504 542 FunFam Pectinesterase 223 541 - -
Cec11g1504 542 Pfam Pectinesterase 228 527 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Cec11g1504 542 Gene3D - 224 541 IPR012334 -
Cec11g1504 542 SUPERFAMILY Pectin lyase-like 224 540 IPR011050 -
Cec11g1504 542 PANTHER PECTINESTERASE 46 532 - GO:0030599(PANTHER)|GO:0046910(PANTHER)
Cec11g1504 542 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 169 IPR035513 -
Cec11g1504 542 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 169 IPR035513 -
Cec11g1504 542 CDD PMEI-like_3 47 171 - -
Cec11g1504 542 ProSitePatterns Pectinesterase signature 2. 374 383 IPR033131 -
Cec11g1504 542 SMART PMEI_2 22 166 IPR006501 GO:0004857(InterPro)
Cec11g1504 542 Pfam Plant invertase/pectin methylesterase inhibitor 47 165 IPR006501 GO:0004857(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0121 Cec-Chr2:1297745 Cec11g1504 Cec-Chr11:29244139 1.30E-146 dispersed
Cec09g2172 Cec-Chr9:38641828 Cec11g1504 Cec-Chr11:29244139 7.10E-76 dispersed
Cec09g2174 Cec-Chr9:38655802 Cec11g1504 Cec-Chr11:29244139 9.40E-76 dispersed
Cec10g0587 Cec-Chr10:7643750 Cec11g1504 Cec-Chr11:29244139 3.00E-91 dispersed
Cec11g0021 Cec-Chr11:306833 Cec11g1504 Cec-Chr11:29244139 3.50E-81 dispersed
Cec11g1504 Cec-Chr11:29244139 Cec09g0544 Cec-Chr9:4669231 1.50E-171 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec11g1504 K01051 - csv:101205879 901.738